BAC Information

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BAC

Clone NameB6Ng01-261B15
Chromosome4 (Build37)
Map Location 90,631,887 - 90,632,920
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp352, LOC619842, LOC435792, Ppia-ps4_804.1
Downstream geneLOC664840, LOC664848, LOC100042274, Elavl2, LOC664864, LOC620016, LOC654475, 4930577H14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261B15.bB6Ng01-261B15.g
ACCGA065855GA065856
length1,1871,030
definitionB6Ng01-261B15.b B6Ng01-261B15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccctatttttaatggggttgtttgattt
tctggttatttttttttttattattcaataaagttttattttcccaaatg
cacagctgattgaacctgttcatgaatcctcaccagcagccgtagcttct
ccaccctttgtgtttctggtgtaaattatgtgggcttgtgcttttaaccc
agcttgataagtcctttactaaggagctcctgaagggctgccctggccaa
ggaaccatgaatcttcagtctctcagagaccacggctggagtaataagct
tatagttcggaacctccttacagagcttgtcgtatgttgctttgtcgaac
aggacaagattgttcagcttgtcccgaactttgcctttggaccacttctt
cttcttggccttgccaccagatttatttactgggtctttatcctttttgg
ccaactttccagcatctttcttcttgtcatctttgggtggcatggcgaag
ctcagagagtcatgtggaccacagcagcctcgctaagatggagtctacct
tcttgaattctttatatatattggatattagtcccctatctgatttagga
taggtaaagatcctttcccaatctgttggtggtctttttgtattattgac
agtgtcttttccttacagaagctttgcagtttcatgaggtcccatttgtc
aattcttgctcttacagcacaagccattgctgttctattcaggaatttct
cccctgtgccaatatcttctaggcttttccccactttctcctctataagt
ttcagtgtctctggttttatgtggagctccttgatccacttaggtttgac
ctcagtacaaggagataggaatggatcaattcacattcttctaaatgata
acaaccagttgtgccagcaccatttgttgaaaatgctgtcttttttccac
tggatggctttagctcccttgtcaaagatcaagtgaccataggtgtgtgg
gtcatttctgggtcttcaattctgttcatggtctactgtctgtctctata
ccagtaccatgcagtttttatcaccaattgctctaaatagtaaagcttta
aggtcaggcatggtgaattccaacaaagtcctttaatctgagaagagttt
tggcatcctaagcttttgttattccagatgaaattgc

gaattcagaactaaacaggaaagagaaacaaagaacgagtaaacatggga
gacaactaaacattgatgaacttgcccatagtccccagtgggaagaaacc
cactgagagctatgccgggcacccaggcaggcaagtttaattggcaagac
aacagacaaacttgtgatcatggtctacttcccacactgataaatgtcct
aagtgctcttggcacaagctgtcaaaacaaatcttgatttcctctggctt
ttgttgataggtgacaacactcaaccaagcaaattatgagtcttctgctt
cagtgtaactttcactctcccagtcaaatatgtcagaaaaaaatgtagcc
aatatcctcacccccacagacccataatggaacagggcacactaggtgag
cagctcagagctctcacctggagctatagggctgtcttcttttgtttgct
caatcccatgttgcttgcacagacatgctatctttgatatatcagctaat
aatacaaatgtgttcttaaagctttaggatttataaatgagtaataaaaa
catgacaaaagttctggctaactacaacacaaaaccatatatcctgtgat
atgaagttcctagcagagccgaaatgacatagcagcattatctaaaactg
gcccaaagtggaaacaacccagatgctcatctgctgatgaatcagtagac
agaagtaaacacaagtggggtacccaggcaaaggagtggtcttcagctat
gggagggatggaggtattgaaactaaggcttgaaacataatgctaagtaa
aagcagttagacagaagagttgtgataagtatgattccattgtgtgaaat
actctgaataggcaaactcatacagacaaaaagaaaatcagtggctaaag
aaaggatgaaaggagtctaagaattgaatacaataggaaaaaaagatttc
tttacagagttatagtaatgttatcaaatatctgtatagccatgaagaaa
gaaagaaggaaggagagagagaaagaaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_90631887_90632920
seq2: B6Ng01-261B15.g_71_1100

seq1  GAATTCAGAACTAAACAGGAAAGAGAAACAAAGAACGAGTAAACATGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACTAAACAGGAAAGAGAAACAAAGAACGAGTAAACATGGGA  50

seq1  GACAACTAAACATTGATGAACTTGCCCATAGTCCCCAGTGGGAAGAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTAAACATTGATGAACTTGCCCATAGTCCCCAGTGGGAAGAAACC  100

seq1  CACTGAGAGCTATGCCGGGCACCCAGGCAGGCAAGTTTAATTGGCAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGAGCTATGCCGGGCACCCAGGCAGGCAAGTTTAATTGGCAAGAC  150

seq1  AACAGACAAACTTGTGATCATGGTCTACTTCCCACACTGATAAATGTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACAAACTTGTGATCATGGTCTACTTCCCACACTGATAAATGTCCT  200

seq1  AAGTGCTCTTGGCACAAGCTGTCAAAACAAATCTTGATTTCCTCTGGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCTCTTGGCACAAGCTGTCAAAACAAATCTTGATTTCCTCTGGCTT  250

seq1  TTGTTGATAGGTGACAACACTCAACCAAGCAAATTATGAGTCTTCTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGATAGGTGACAACACTCAACCAAGCAAATTATGAGTCTTCTGCTT  300

seq1  CAGTGTAACTTTCACTCTCCCAGTCAAATATGTCAGAAAAAAATGTAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTAACTTTCACTCTCCCAGTCAAATATGTCAGAAAAAAATGTAGCC  350

seq1  AATATCCTCACCCCCACAGACCCATAATGGAACAGGGCACACTAGGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCTCACCCCCACAGACCCATAATGGAACAGGGCACACTAGGTGAG  400

seq1  CAGCTCAGAGCTCTCACCTGGAGCTATAGGGCTGTCTTCTTTTGTTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCAGAGCTCTCACCTGGAGCTATAGGGCTGTCTTCTTTTGTTTGCT  450

seq1  CAATCCCATGTTGCTTGCACAGACATGCTATCTTTGATATATCAGCTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCCATGTTGCTTGCACAGACATGCTATCTTTGATATATCAGCTAAT  500

seq1  AATACAAATGTGTTCTTAAAGCTTTAGGATTTATAAATGAGTAATAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAATGTGTTCTTAAAGCTTTAGGATTTATAAATGAGTAATAAAAA  550

seq1  CATGACAAAAGTTCTGGCTAACTACAACACAAAACCATATATCCTGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACAAAAGTTCTGGCTAACTACAACACAAAACCATATATCCTGTGAT  600

seq1  ATGAAGTTCCTAGCAGAGCCGAAATGACATAGCAGCATTATCTAAAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTCCTAGCAGAGCCGAAATGACATAGCAGCATTATCTAAAACTG  650

seq1  GCCCAAAGTGGAAACAACCCAGATGCTCATCTGCTGATGAATCAGTAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAGTGGAAACAACCCAGATGCTCATCTGCTGATGAATCAGTAGAC  700

seq1  AGAAGTAAACACAAGTGGGGTACCCAGGCAAAGGAGTGGTCTTCAGCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAAACACAAGTGGGGTACCCAGGCAAAGGAGTGGTCTTCAGCTAT  750

seq1  GGGAGGGATGGAGGTATTGAAACTAAGGCTTGAAAACATAATGCTAAGTA  800
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGGAGGGATGGAGGTATTGAAACTAAGGCTTG-AAACATAATGCTAAGTA  799

seq1  AAAGCAGTTAGACAGAAGAGTTGTGATAAGTATGATTTCAATTGTGTGAA  850
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  AAAGCAGTTAGACAGAAGAGTTGTGATAAGTATGA-TTCCATTGTGTGAA  848

seq1  ATACTCTGAATAGGCAAACTCATACAGACAAAAAGAAAATCAGTGGCTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTGAATAGGCAAACTCATACAGACAAAAAGAAAATCAGTGGCTAA  898

seq1  AGAAAGGATG-AAGGAGTCTAAGAA-TGAATACAAATAGGAAAAAAAAGA  948
      |||||||||| |||||||||||||| ||||||| |||||| |||||||||
seq2  AGAAAGGATGAAAGGAGTCTAAGAATTGAATAC-AATAGG-AAAAAAAGA  946

seq1  TTTCTTTACAGAGTTAATAGTAATGTTATCAAATATCTGTATAGCAATGA  998
      ||||||||||||||| ||||||||||||||||||||||||||||| ||| 
seq2  TTTCTTTACAGAGTT-ATAGTAATGTTATCAAATATCTGTATAGCCATG-  994

seq1  AAGAAAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGC  1034
      ||||||||||||| ||| ||||||||||||||||||
seq2  AAGAAAGAAAGAAGGAAGGAGAGAGAGAAAGAAAGC  1030


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