BAC Information

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BAC

Clone NameB6Ng01-265O03
Chromosome4 (Build37)
Map Location 68,309,733 - 68,433,460
singlet/doubletdoublet
Overlap geneDbc1
Upstream geneLOC433715, Tcp1-ps1
Downstream geneLOC622491
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265O03.bB6Ng01-265O03.g
ACCGA069417GA069418
length402467
definitionB6Ng01-265O03.b B6Ng01-265O03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,433,053 - 68,433,460)(68,309,733 - 68,310,205)
sequence
aggttgttagggagagtatcatgcacctttaacttctgagccatctcatt
ggcccagttctgccttttaaaattagcacaaactcttctttggtttttcc
caccttttaactttttttaaaaaaaattaccattgtttgctttgtggaac
tatggttgactcaacccccaggagattccaagctgtgtgctattttggtg
ctgataattttttacatgttctccaggtttgggctgcaatgaatactgaa
gcaatgttaatgcatgcctgttagggtacgtgtgttgttgttgttgttgt
tgttgttgtggttgttgttgttgtagttgttgttattgtgtactacttgg
gatagaattgctgctacacttatgctaatatatatgttttgctaaatatt
ca

tctgatatatattttttcaatcaaaaagtccatggcatgtttttacatga
aaggtaaaatctatagaacactatggcagaagactgcttgccctttctta
atgatctgaatcatagatttgcctatattgtactgatggacaaaatcaaa
ggctttatctcatagcaaaataagactgactaattttccattttctattt
tctttactgtttattatcttttcttagatgttatatctattgacctgttt
tttctcatttttattacttccttgagaattctacattacatatcttttac
ctacttattttttaatttattagatgaaattttaaaactactattgttaa
atggatgtataggtataggtataggtataggtataggtataggtataggt
ataggtataggtataggtagaggttcaggtcctggtatatatgtttgtat
ggagagagattgggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_68433053_68433460
seq2: B6Ng01-265O03.b_48_455 (reverse)

seq1  TGAATATTTAGCAAAACATATATATTAGCATATGTGTGGCAGCAATTCTA  50
      |||||||||||||||||||||||||||||||| |||| ||||||||||||
seq2  TGAATATTTAGCAAAACATATATATTAGCATAAGTGTAGCAGCAATTCTA  50

seq1  TCCCAAGTAGTACACAATAACAACAACAACAACAACAACAACCACAACAA  100
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCCCAAGTAGTACACAATAACAACAACTACAACAACAACAACCACAACAA  100

seq1  CAACAACAACAACAACAACACACGTACCCTAACAGGCATGCATTAACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAACAACAACACACGTACCCTAACAGGCATGCATTAACATT  150

seq1  GCTTCAGTATTCATTGCAGCCCAAACCTGGAGAACATGTAAAAAATTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGTATTCATTGCAGCCCAAACCTGGAGAACATGTAAAAAATTATC  200

seq1  AGCACCAAAATAGCACACAGCTTGGAATCTCCTGGGGGTTGAGTCAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAAAATAGCACACAGCTTGGAATCTCCTGGGGGTTGAGTCAACCA  250

seq1  TAGTTCCACAAAGCAAACAATGGTAATTTTTTTTAAAAAAAGTTAAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCACAAAGCAAACAATGGTAATTTTTTTTAAAAAAAGTTAAAAGG  300

seq1  TGGGAAAAACCAAAGAAGAGTTTGTGCTAATTTTAAAAGGCAGAACTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAAACCAAAGAAGAGTTTGTGCTAATTTTAAAAGGCAGAACTGGG  350

seq1  CCAATGAGATGGCTCAGAAGTTAAAGGTGCATGATACTCTCCCTAACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAGATGGCTCAGAAGTTAAAGGTGCATGATACTCTCCCTAACAAC  400

seq1  CTGAATTC  408
      ||||||||
seq2  CTGAATTC  408


seq1: chr4_68309733_68310205
seq2: B6Ng01-265O03.g_68_540

seq1  GAATTCTCTGATATATATTTTTTCAATCAAAAAGTCCATGGCATGTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATATATATTTTTTCAATCAAAAAGTCCATGGCATGTTTTT  50

seq1  ACATGAAAGGTAAAATCTATAGAACACTATGGCAGAAGACTGCTTGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAAGGTAAAATCTATAGAACACTATGGCAGAAGACTGCTTGCCCT  100

seq1  TTCTTAATGATCTGAATCATAGATTTGCCTATATTGTACTGATGGACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATGATCTGAATCATAGATTTGCCTATATTGTACTGATGGACAAA  150

seq1  ATCAAAGGCTTTATCTCATAGCAAAATAAGACTGACTAATTTTCCATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGGCTTTATCTCATAGCAAAATAAGACTGACTAATTTTCCATTTT  200

seq1  CTATTTTCTTTACTGTTTATTATCTTTTCTTAGATGTTATATCTATTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCTTTACTGTTTATTATCTTTTCTTAGATGTTATATCTATTGAC  250

seq1  CTGTTTTTTCTCATTTTTATTACTTCCTTGAGAATTCTACATTACATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTTCTCATTTTTATTACTTCCTTGAGAATTCTACATTACATATC  300

seq1  TTTTACCTACTTATTTTTTAATTTATTAGATGAAATTTTAAAACTACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCTACTTATTTTTTAATTTATTAGATGAAATTTTAAAACTACTAT  350

seq1  TGTTAAATGGATGTATAGGTATAGGTATAGGTATAGGTATAGGTATAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATGGATGTATAGGTATAGGTATAGGTATAGGTATAGGTATAGGT  400

seq1  ATAGGTATAGGTATAGGTATAGGTATAGGTACAGGTACAGGTATATATGT  450
      ||||||||||||||||||||||||| |||| ||||| | |||||||||||
seq2  ATAGGTATAGGTATAGGTATAGGTAGAGGTTCAGGTCCTGGTATATATGT  450

seq1  ATGTATGGAGAGAGACTGGGACA  473
       |||||||||||||| ||||| |
seq2  TTGTATGGAGAGAGATTGGGAGA  473


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