BAC Information

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BAC

Clone NameB6Ng01-268A17
Chromosome4 (Build37)
Map Location 64,395,086 - 64,395,916
singlet/doubletsinglet
Overlap genenone
Upstream geneTnfsf15, Tnfsf8, Rpl17-ps, Tnc
Downstream genePappa, Astn2, Trim32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268A17.bB6Ng01-268A17.g
ACCGA071011GA071012
length1,1621,171
definitionB6Ng01-268A17.b B6Ng01-268A17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagctgtacaagaatttgatggcatgaaagggtcatgaataat
aacttaatctggaaccatgtggcaggatcagaatccccaaagagggggtt
ggagaggccattagtgagggtgcagcctaaaccacattagaagccttagt
atattgtaggtatcagtatcataggcaatcacattcgtaaagaaaacttc
tgaagctcaaaacatccattgaaccccaaacaataatattgagagacttc
atcaccccaatctcaccaatagaaaggtcatcaaaacagaaactgaacag
acacacaataaaactaacagaagttataaaccaaatggatttagcagaac
actatacctcagaataaaagaatataacttctaagcagctcacagaacct
tctccaaaaaaatgaccaatattcagaaacaaaacaagcctcaacagata
caagaagattgaaataattcctccattccattaggttactatggattaag
gctggaattcaataacaacagaaacaacagaaagtctgcatactcatgga
aactgaacaactctctacttgatgataacttgctcagggaagaaagtaaa
gtcttcccagaaatggagccacaacataaccaaacttatgggacacagtg
ttaagtggaaattggatagcattaagtgccttcttcaagaaattttggag
atcctctactatcaacttactagcacaattgaaaactctagaacaaaaag
aagcaaacacatccaaaaggagtagatggcaggaaataatcaaacacgtg
gctaatattaaccaaatagaaattaatttattcagaaattaatttattta
atgatttttgccatcattgtttgcacacaacattttttttaaaaattttt
gattagatattttcttcatttacatttcaaatgctatcctgaaagttccc
aatataccccctgccctgtcccctatccacccactcccacttcttgggcc
ctggtgctccactgtactggggaatacaaagtttgcaagtccacagcctc
ctcttcccaatgacggcttacctcagccatctactgctacatatgcagcc
taagaagaacacggagcttctggggatactgggtagtttcaatatttgtt
gttccacctgta

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagaaactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggaccagaatgtagctgtctcttgtgagactatgccggggccctagcaac
acagagtggatgctcatcagtcagctaatggaatggatcagcaggctccc
aatggaggagctagaaaaagtacccaaggagctgaagggatcgtcacccc
tatcgtgaaacaccattatgaactaaccagtacccctgagctctgactct
agctgcatatgtatacatagcatggcctagtcgccactacttgcaaagaa
gcaattggcaactggcaagctatgtcctgtcagtacgcaggtcacaggga
ttgatgtctgaggctatgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_64395086_64395916
seq2: B6Ng01-268A17.b_371_1210

seq1  GTTATAAACCAAATGGATTTAGCAGAACACTATACCTCAGAATAAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAACCAAATGGATTTAGCAGAACACTATACCTCAGAATAAAAGAA  50

seq1  TATAACTTCTAAGCAGCTCACAGAACCTTCTCCAAAAAAATGACCAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTTCTAAGCAGCTCACAGAACCTTCTCCAAAAAAATGACCAATAT  100

seq1  TCAGAAACAAAACAAGCCTCAACAGATACAAGAAGATTGAAATAATTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAACAAAACAAGCCTCAACAGATACAAGAAGATTGAAATAATTCCT  150

seq1  CCATTCCATTAGGTTACTATGGATTAAGGCTGGAATTCAATAACAACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCATTAGGTTACTATGGATTAAGGCTGGAATTCAATAACAACAGA  200

seq1  AACAACAGAAAGTCTGCATACTCATGGAAACTGAACAACTCTCTACTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAGAAAGTCTGCATACTCATGGAAACTGAACAACTCTCTACTTGA  250

seq1  TGATAACTTGCTCAGGGAAGAAAGTAAAGTCTTCCCAGAAATGGAGCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACTTGCTCAGGGAAGAAAGTAAAGTCTTCCCAGAAATGGAGCCAC  300

seq1  AACATAACCAAACTTATGGGACACAGTGTTAAGTGGAAATTGGATAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAACCAAACTTATGGGACACAGTGTTAAGTGGAAATTGGATAGCAT  350

seq1  TAAGTGCCTTCTTCAAGAAATTTTGGAGATCCTCTACTATCAACTTACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCCTTCTTCAAGAAATTTTGGAGATCCTCTACTATCAACTTACTA  400

seq1  GCACAATTGAAAACTCTAGAACAAAAAGAAGCAAACACATCCAAAAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATTGAAAACTCTAGAACAAAAAGAAGCAAACACATCCAAAAGGAG  450

seq1  TAGATGGCAGGAAATAATCAAACACGTGGCTAATATTAACCAAATAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGCAGGAAATAATCAAACACGTGGCTAATATTAACCAAATAGAAA  500

seq1  TTAATTTATTCAGAAATTAATTTATTTAATGATTTTTGCCATCATTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTATTCAGAAATTAATTTATTTAATGATTTTTGCCATCATTGTTT  550

seq1  GCACACAACATTTTTTTTAAAAATTTTTGATTAGATATTTTCTTCATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAACATTTTTTTTAAAAATTTTTGATTAGATATTTTCTTCATTTA  600

seq1  CATTTCAAATGCTATCCTGAAAGTTCCCAATATACCCCCTGCCCTGTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAAATGCTATCCTGAAAGTTCCCAATATACCCCCTGCCCTGTCCC  650

seq1  CTATCCACCCACTCCCACTTCTT-GGCCCTGGTGCTCCACTGTACTGGGG  699
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTATCCACCCACTCCCACTTCTTGGGCCCTGGTGCTCCACTGTACTGGGG  700

seq1  AATACAAAGTTTGCAAGTCCAACAGGCCTCTCTTCCCAATGACGGC-TAA  748
      |||||||||||||||||||| |||| |  ||||||||||||||||| || 
seq2  AATACAAAGTTTGCAAGTCC-ACAGCCTCCTCTTCCCAATGACGGCTTAC  749

seq1  CTCAGCCATCTACTGCTACATATGCAGCTAGAG----ACAC-GAGCTCTG  793
      ||||||||||||||||||||||||||||   ||    |||| |||||   
seq2  CTCAGCCATCTACTGCTACATATGCAGCCTAAGAAGAACACGGAGCTTCT  799

seq1  GGGGATACTGGTTAGTT--CATA-TTGTTGTTCCACCTGTA  831
      ||||||||||| |||||   ||| |||||||||||||||||
seq2  GGGGATACTGGGTAGTTTCAATATTTGTTGTTCCACCTGTA  840


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