BAC Information

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BAC

Clone NameB6Ng01-272B24
Chromosome4 (Build37)
Map Location 146,889,514 - 146,890,668
singlet/doubletsinglet
Overlap genenone
Upstream geneRex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671
Downstream geneLOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272B24.bB6Ng01-272B24.g
ACCGA074029GA074030
length1,1541,116
definitionB6Ng01-272B24.b B6Ng01-272B24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagagagagtagtagacttcttgctgaggctctgacagcttcta
catattttcggttttgagcctttttatcttcacctagtaatacttgcctg
gagcactaagctgaatcttacctatttcagttaacacaaatcaccatatg
taaaacagtgtttctaacttttttaatgctaaacactgacatagaattct
aattatttttagcagggcaaactaccctgcagttcaatgaatgatttcgc
agttttaagacaattggaaatatgtgtttccctgtacttttaagcaataa
ctgtgacagggtcgttacatcccaaagggattgttatccaccagttgaaa
atcactactattaactttatgatacaggtttgcaaaaatttcatgacttc
tgcatatgttttatgtgaggcatttcctgggaagatgcaacatatattca
tctgagtatcccaagggcaagttgaaaacaaccaaagcaaccttgtagaa
tctttcagctttattggagttagttacaggacaataggaaaggagttgtt
gagcagatcacaagagactcggagtcacttgttatcctataatgtgaaac
aagtatttgagaagaattatgattactggatactcgaagcacacttcaca
tctgcaagcatatttatagaataaagaatatgctgtctgggtagctcagt
ttgccagataatcttttaagtatatttttatcttaattggttcattttaa
ttaaatatacagaatgttaccagttttattagatattttgaggattgtat
taaagaccttaaatagtttccttttgaaatggattatttctgtcttaaag
aaagtgttacacaatactatcttctgacttcccagcttgtcttcatcttg
ccacatttgagggtgaacaaataaaaaggtgtcatgaaagctttctacac
tgggcgtggtggcacatgtctttaatccaagcactcgggaggagagaggc
agcggattactgagttcgaggccagcctggttctacaggatgggccatga
tatacagagaaaccttgttcttctaaaatcaagccctcctccccaaaaaa
aggaagaagtagaagaagaattcggtaaggaagaagtagccttgctacat
tttt
gaattctctgtttaggtattgtactggctagttttgtgtcaacttgacac
aacttgagttatcacagagaaaggagcttcagttgaggaaatttctccat
gagatccaactgtaaggcattttctcaattagtgatcaagggggaaaggc
ccttgtggttgggaccatctcagggctggtagtcttggttctataagaaa
gcaggctgagcaagccaggggaggcaagccagtacagaacatccctccat
ggcctctgcatcagctcctgctccctgacctgcttgagttccagtcctga
cttcctttggtgatgaacagcagtatggaagtgtaagccaaataaaccct
ttcctccccaacttgcttcttggtcatgatgtttgtgcaggaatagaaac
cctgactaagacaaattggtaccagcagagtggggtattcctgtgacaac
ctgaccatgttttggggaggactgtggaaggactttggaactttgggctt
gaagatccatccgttgttaagagctctgtcggatgttgtgtaggagcttg
gaagatactgttgagaacactgcagaagatggaggtctggtttgtgaaat
ttcagagggaaaattaaagactcttttcagggccattgctgttttgaatg
tgaagattctgtagttctggttagctggggctgaagaatcagttgtgatt
aacaagataccagaactactaaagcaaaaactttgcatactgggactatt
gatgctggttagctggagctaagaaattagtggtgattaagaagagacca
gcatcattgaggtgacatcttctgggaagtgttttctgaaagcacaaaga
ggctgtgttccagagatggccaaaggttgtactcctgctgcagcaggact
tggtaatatgtaaagggtcacccaggtggtactgggtttgaaggcatgaa
aggggtcacgcaaagcagctgagctcgcactgtgagaggccatggaagcc
attggtgagtgcagcctcagtgcaattgatgccagatgagggtcatgcag
tgttttggagatgccagtacatgaagatgacccactaagagcaagccagc
cgcccagtgtgggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146889514_146890668
seq2: B6Ng01-272B24.b_47_1200 (reverse)

seq1  AAAAATGTAGCAAGCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  50
      |||||||||||||| |  |  ||||| ||| |     |||||  | |  |
seq2  AAAAATGTAGCAAGGC--TACTTCTTCCTTAC-CGAATTCTTCTTCTACT  47

seq1  TCTTTCTTTTTTTTGGG-GGGGGGTTGGTTTTTAGA--GACAGGGTTTCT  97
      |||| |||||||| ||| || ||| | | |||||||   ||| |||||||
seq2  TCTTCCTTTTTTTGGGGAGGAGGGCTTGATTTTAGAAGAACAAGGTTTCT  97

seq1  CTGTATATCCATGG-CCATCCTGTAG-ACCAGGCTGGCCTCGAACTCAGT  145
      |||||||| ||||| ||||||||||| |||||||||||||||||||||||
seq2  CTGTATAT-CATGGCCCATCCTGTAGAACCAGGCTGGCCTCGAACTCAGT  146

seq1  AATCCGCCTGCCTCTCT-CTCCCGAGTGCTTGGATTAAAGACATGTGCCA  194
      |||||| |||||||||| ||||||||||||||||||||||||||||||||
seq2  AATCCG-CTGCCTCTCTCCTCCCGAGTGCTTGGATTAAAGACATGTGCCA  195

seq1  CCACGCCCAGTTGTAGAAAGCTTTTCATGACACCTTTTTATTTGTTCACC  244
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  CCACGCCCAG-TGTAGAAAGC-TTTCATGACACCTTTTTATTTGTTCACC  243

seq1  CTCAAATGTGGCAAGATGAAGACAAGCTGGGAAGTCAGAAGATAGTATTG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATGTGGCAAGATGAAGACAAGCTGGGAAGTCAGAAGATAGTATTG  293

seq1  TGTAACACTTTCTTTAAGACAGAAATAATCCATTTCAAAAGGAAACTATT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACACTTTCTTTAAGACAGAAATAATCCATTTCAAAAGGAAACTATT  343

seq1  TAAGGTCTTTAATACAATCCTCAAAATATCTAATAAAACTGGTAACATTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCTTTAATACAATCCTCAAAATATCTAATAAAACTGGTAACATTC  393

seq1  TGTATATTTAATTAAAATGAACCAATTAAGATAAAAATATACTTAAAAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTTAATTAAAATGAACCAATTAAGATAAAAATATACTTAAAAGA  443

seq1  TTATCTGGCAAACTGAGCTACCCAGACAGCATATTCTTTATTCTATAAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGGCAAACTGAGCTACCCAGACAGCATATTCTTTATTCTATAAAT  493

seq1  ATGCTTGCAGATGTGAAGTGTGCTTCGAGTATCCAGTAATCATAATTCTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGCAGATGTGAAGTGTGCTTCGAGTATCCAGTAATCATAATTCTT  543

seq1  CTCAAATACTTGTTTCACATTATAGGATAACAAGTGACTCCGAGTCTCTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATACTTGTTTCACATTATAGGATAACAAGTGACTCCGAGTCTCTT  593

seq1  GTGATCTGCTCAACAACTCCTTTCCTATTGTCCTGTAACTAACTCCAATA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTGCTCAACAACTCCTTTCCTATTGTCCTGTAACTAACTCCAATA  643

seq1  AAGCTGAAAGATTCTACAAGGTTGCTTTGGTTGTTTTCAACTTGCCCTTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAAAGATTCTACAAGGTTGCTTTGGTTGTTTTCAACTTGCCCTTG  693

seq1  GGATACTCAGATGAATATATGTTGCATCTTCCCAGGAAATGCCTCACATA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTCAGATGAATATATGTTGCATCTTCCCAGGAAATGCCTCACATA  743

seq1  AAACATATGCAGAAGTCATGAAATTTTTGCAAACCTGTATCATAAAGTTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATATGCAGAAGTCATGAAATTTTTGCAAACCTGTATCATAAAGTTA  793

seq1  ATAGTAGTGATTTTCAACTGGTGGATAACAATCCCTTTGGGATGTAACGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGTGATTTTCAACTGGTGGATAACAATCCCTTTGGGATGTAACGA  843

seq1  CCCTGTCACAGTTATTGCTTAAAAGTACAGGGAAACACATATTTCCAATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCACAGTTATTGCTTAAAAGTACAGGGAAACACATATTTCCAATT  893

seq1  GTCTTAAAACTGCGAAATCATTCATTGAACTGCAGGGTAGTTTGCCCTGC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAAAACTGCGAAATCATTCATTGAACTGCAGGGTAGTTTGCCCTGC  943

seq1  TAAAAATAATTAGAATTCTATGTCAGTGTTTAGCATTAAAAAAGTTAGAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAATTAGAATTCTATGTCAGTGTTTAGCATTAAAAAAGTTAGAA  993

seq1  ACACTGTTTTACATATGGTGATTTGTGTTAACTGAAATAGGTAAGATTCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTTTTACATATGGTGATTTGTGTTAACTGAAATAGGTAAGATTCA  1043

seq1  GCTTAGTGCTCCAGGCAAGTATTACTAGGTGAAGATAAAAAGGCTCAAAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGTGCTCCAGGCAAGTATTACTAGGTGAAGATAAAAAGGCTCAAAA  1093

seq1  CCGAAAATATGTAGAAGCTGTCAGAGCCTCAGCAAGAAGTCTACTACTCT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAAATATGTAGAAGCTGTCAGAGCCTCAGCAAGAAGTCTACTACTCT  1143

seq1  CTCTTGAATTC  1155
      |||||||||||
seq2  CTCTTGAATTC  1154