MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-272P08
Chromosome	4 (Build37)
Map Location	89,852,767 - 90,027,042
singlet/doublet	doublet
Overlap gene	Zfp352, LOC619842
Upstream gene	LOC625574, Cdkn2a, Cdkn2b, LOC664785, Dmrta1
Downstream gene	LOC435792, Ppia-ps4_804.1, LOC664840, LOC664848, LOC100042274, Elavl2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC625574 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625574
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 8 Proteins

name	Cdkn2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12578 MGI:104738
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cdkn2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12579 MGI:104737
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664785 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Dmrta1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242523 MGI:2653627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp352 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236537 MGI:2387418
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC619842 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 3 Proteins pseudo : _no_value

name	LOC435792 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435792
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins pseudo : _no_value

name	Ppia-ps4_804.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606536
definition	note : peptidylprolyl isomerase A (Ppia) pseudogene 4_804.1 pseudo : _no_value

name	LOC664840 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins pseudo : _no_value

name	LOC664848 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664848
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100042274 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042274
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Elavl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15569 MGI:1100887
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC625574 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94371965 GeneID:625574
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 8 Proteins product : similar to TGFB-induced factor 2 transcript_id : XM_890156.2

name	Cdkn2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:98986443 GeneID:12578 MGI:104738
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase inhibitor 2A transcript_id : NM_009877.2

name	Cdkn2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:98986446 GeneID:12578 MGI:104738
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase inhibitor 2A transcript_id : NM_001040654.1

name	Cdkn2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131209 GeneID:12579 MGI:104737
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) transcript_id : NM_007670.3

name	Dmrta1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130309 GeneID:242523 MGI:2653627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : doublesex and mab-3 related transcription factor like family A1 transcript_id : NM_175647.3

name	Zfp352 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363529 GeneID:236537 MGI:2387418
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 352 transcript_id : NM_153102.2

name	LOC100042274 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252790 GeneID:100042274
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042274 transcript_id : XM_001478667.1

name	Elavl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46592817 GeneID:15569 MGI:1100887
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) transcript_id : NM_207685.1

name	Elavl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46592825 GeneID:15569 MGI:1100887
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) transcript_id : NM_207686.1

name	Elavl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46592803 GeneID:15569 MGI:1100887
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B) transcript_id : NM_010486.2

name	LOC625574 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82893728 GeneID:625574
definition	codon_start : 1 product : hypothetical protein protein_id : XP_895249.1

name	Cdkn2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:98986447 GeneID:12578 MGI:104738
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004861 - cyclin-dependent protein kinase inhibitor activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007568 - aging [Evidence IMP]; GO:0006915 - apoptosis [Evidence IEA]; GO:0007569 - cell aging [Evidence IDA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IDA]; GO:0008544 - epidermis development [Evidence IMP]; GO:0045736 - negative regulation of cyclin-dependent protein kinase activity [Evidence IDA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0000079 - regulation of cyclin-dependent protein kinase activity [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; cyclin-dependent kinase inhibitor 2A (p16, inhibits CDK4); cyclin-dependent kinase inhibitor protein product : cyclin-dependent kinase inhibitor 2A isoform 2 protein_id : NP_001035744.1

name	Cdkn2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753390 CCDS:CCDS18350.1 GeneID:12578 MGI:104738
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004861 - cyclin-dependent protein kinase inhibitor activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0007568 - aging [Evidence IMP]; GO:0006915 - apoptosis [Evidence IEA]; GO:0007569 - cell aging [Evidence IDA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IDA]; GO:0008544 - epidermis development [Evidence IMP]; GO:0045736 - negative regulation of cyclin-dependent protein kinase activity [Evidence IDA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0000079 - regulation of cyclin-dependent protein kinase activity [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; cyclin-dependent kinase inhibitor 2A (p16, inhibits CDK4); cyclin-dependent kinase inhibitor protein product : cyclin-dependent kinase inhibitor 2A isoform 1 protein_id : NP_034007.1

name	Cdkn2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671728 CCDS:CCDS18351.1 GeneID:12579 MGI:104737
definition	GO_function : GO:0004861 - cyclin-dependent protein kinase inhibitor activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA] codon_start : 1 note : cyclin-dependent kinase inhibitor p15INK4b; cyclin-dependent kinase inhibitor protein product : cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) protein_id : NP_031696.1

name	Dmrta1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28316744 CCDS:CCDS18352.1 GeneID:242523 MGI:2653627
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007548 - sex differentiation [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : doublesex and mab-3 related transcription factor 4 product : doublesex and mab-3 related transcription factor like family A1 protein_id : NP_783578.1

name	Zfp352 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23821036 CCDS:CCDS18353.1 GeneID:236537 MGI:2387418
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 352 protein_id : NP_694742.1

name	LOC100042274 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252791 GeneID:100042274
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478717.1

name	Elavl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46592818 CCDS:CCDS18354.1 GeneID:15569 MGI:1100887
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; HU-antigen; HU-antigen B product : ELAV-like 2 isoform 1 protein_id : NP_997568.1

name	Elavl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46592826 CCDS:CCDS18356.1 GeneID:15569 MGI:1100887
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; HU-antigen; HU-antigen B product : ELAV-like 2 isoform 3 protein_id : NP_997569.1

name	Elavl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754264 CCDS:CCDS18355.1 GeneID:15569 MGI:1100887
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; HU-antigen; HU-antigen B product : ELAV-like 2 isoform 2 protein_id : NP_034616.1

name	LOC664785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664785
definition	number : 5 pseudo : _no_value

name	LOC664785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664785
definition	number : 4 pseudo : _no_value

name	LOC664785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664785
definition	number : 3 pseudo : _no_value

name	LOC664785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664785
definition	number : 2 pseudo : _no_value

name	LOC664785 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664785
definition	number : 1 pseudo : _no_value

name	LOC435792 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435792
definition	number : 1 pseudo : _no_value

name	LOC664848 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664848
definition	number : 1 pseudo : _no_value

name	LOC619842 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252789 GeneID:619842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 3 Proteins product : similar to zinc finger protein 352 pseudo : _no_value transcript_id : XR_033808.1

name	LOC664840 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:94372121 GeneID:664840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 2 Proteins product : similar to hCG1640785 pseudo : _no_value transcript_id : XR_001654.1

clone name	MSMg01-523N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371G15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-149G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-480O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297O21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-263J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366K09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-295B07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-301G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276J24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-052I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169L10
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-272P08.b	B6Ng01-272P08.g
ACC	GA074651	GA074652
length	1,060	1,158
definition	B6Ng01-272P08.b	B6Ng01-272P08.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(89,852,767 - 89,853,835)	(90,025,873 - 90,027,042)
sequence	gaattcaggttccttttgtcattctgctttctgtcacaataataaaataa tcacaccctctgccatgtgataggcagtgagaggcactgtattggaaata cagtgagtcttcaccagaaactgaacctggcagttctttgatcttggact ttccagcctacaggattgtgaaataatgaatttatgctctcgtaaataac ccaatttctggcattttgttatagtagtactaaaagataaagttaattga acagaaaactacataataatttgctgaagaaagtgtctttatctcttaaa tataacaggttaggttacatagtaccccatttactttttatatggaaact cttttgtgttctgagattcatatttattttgtcttacatattgtcagggt ttagatgtacaggacatagagcactgttttattaagctagaaaaggaatg atacaaacaaatcctgttggactctgggcaatggggaaaaggtgtaacag cagtccttctttctctctaaaaaataaaataaaataaatgataataatga taataataataataaactacatcagagtctcagttccacaaaatttttag gaaagtaacattgctgtttccagggagcatacttgattaggggaagaagc aaactgagaacttcagagtgaagataatcatgaggcagaagatctcaagc acagcttgcgaatagaagcaaaggaacactgaagagatgcagccacaggg ccactgcatgcatgaatctcagtacaggcctctcacaagatgaaaggaca ttggttggactagcttcaactcacatagctttggtttttatgcacctttt caagaaaatgtattcctagtttttcctctttgataatctaaagatacaaa attctctgaaactatattgtaggttcattgcttaatagttcattgccctt ctctcctgtgtaagttaaacactatagcttcaattagtatcacattaaag ctgaagttaatctcagcctattctcattttccttaactacctgtgactta gttcatgagg	gaattcccaggtgacaagtccatttggtggccagcctctctctgattttc agataccaacctccagttttgacacaactcttcatgggtctaagaggaca agatctagtgcagaagacaacctggcttgccctttggagacaagtcccag ttctgaagaaacattctacttgggtcagatgaggacctctattgatcaag atgtttacccaagtcagaatggaacactcaatattgaagaaagccttgat tctcagatgacttcacttagttaccaagttccatatgtcggtgaatcctc atatccttcaagttcccctttgatcgatccaaagtcaacctcaggaaaac tcttcagcttccaatctagtccagggacagcatccagagatgaagttaga cctcaatccccagagccctatgtgccagaagaaccctcatcctttgagtg ctactcctgtacctatgcgaactgtcagaaatcttacaaaagggctcaac acctcgaagaacacatgaagaaacacactggtgagaagccttatgcatgc aataagcctgggtgcacatggaaaatctcctgctcaaaagatctcaagag acacaaacaaaagcacagtgtggtgaggccctacccatgtcccaggtgca acaaaaactttgccagattggagtaccttaagcagcacgtgaggtgccat attgaagcatcattccccactgcaacctgattgtccacaaataatatctc ccctaacaaaacttcattgtctcttacctgttagcatcagagtcagtttc cagatagcctctgaatccagggataatgttatccctggggccaaggacct tcttgtgtctgttgccatggctaccacaacacagtactaaagtactcctc acctatgtgcaacgggtacccaccattcattatttgacatctatgtcaaa ccaactatatgacagagaccctgaccattcacccttttcctttttccttt gttcttgtttcctttctctatcccattcattaaaaaaaatctcttccatg agatatgctgtctggagtgatctgtcagaaaaagaagccatcttcaacct aacactacccacaacctcgtcacagccagtgaattttagtgttgttatat agaaacac
quality values	Open. Hide. 24 10 18 25 58 31 21 20 12 47 62 62 62 62 62 62 62 47 54 39 27 54 62 62 54 49 62 62 62 62 62 24 39 22 27 11 30 19 22 25 36 34 27 43 38 45 45 59 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 59 49 62 59 54 59 59 62 62 62 62 62 56 34 34 31 27 28 40 48 42 45 50 35 35 54 46 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 54 62 62 62 62 62 54 33 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 43 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 36 62 62 62 62 62 56 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 48 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 54 54 54 54 54 46 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 54 52 54 43 46 58 54 58 58 58 58 58 58 58 58 52 58 58 58 58 54 54 58 54 54 54 58 54 58 58 58 58 54 54 58 52 58 58 48 54 58 47 58 58 54 54 47 51 58 58 50 54 32 58 52 58 45 45 34 58 49 51 41 41 47 47 49 41 58 46 39 41 58 49 53 54 54 58 48 54 58 58 58 58 46 53 24 50 46 58 51 35 51 46 50 50 46 51 54 51 39 34 51 41 16 58 58 37 38 50 40 58 52 39 53 39 58 40 50 49 54 41 26 58 28 31 50 49 41 39 42 58 21 40 51 50 38 32 53 42 53 49 52 53 42 52 49 32 17 44 31 29 21 58 52 29 36 22 53 53 53 21 35 44 50 31 45 31 38 53 51 38 53 53 40 49 40 38 33 41 45 54 31 53 26 54 40 19 53 32 39 40 24 52 45 52 49 54 34 54 28 33 28 53 37 30 26 49 46 23 51 22 17 49 28 52 45 22 53 43 45 34 26 25 40 33 15 33 34 53 29 39 43 43 43 10 7 11 28 32 23 16 32 15 29 35 32 31 32 34 34 19 41 18 52 23 34 18 53 21 33 13 31 25 31 31 33 46 30 32 18 38 29 42 33 29 29 15 32 46 33 39 21 35 28 33 31 29 19 18 31 21 21 37 37 46 31 31 25 18 48 47 46 31 29 23 29 28 16 29 18 25 46 46 38 31 17 46 21 41 46 46 32 30 33 24 27 14 27 19 27 19 29 14 36 48 46 46 16 26 25 13 31 21 46 31 26 31 26 29 31 28 31 32 31 46 14 21 26 9 19 14 26 44 44 8 38 15 12 19 21 20 31 31 38 18 14 28 7 9 19 10 22 29 13 19 18 15 36 6 8 17 30 9 22 30 17 10 32 19 13 22 8 15 33 19 18 16 24 20 8 43 11 20 15 10 7 4 5 16 21 5 6 10 20 9 29 25 31 19 10 31 33 10 7 5 7 13 18 22 28 20 28 13 14 9 4 5 3 8 15 12 20 8 16 4 9 21 26 13 13 20 47 8 7 14 23 12 25 6 13 13 11 20 4 3 6 5 7 4 13 5 9 11 10 8 10 13 7 13 16 15 34 38 23 8 22 10 6 12 6 3 4 7 7 16 4 8 7 8 13 7 9 16 19 6 15 10 13 7 6 4 2 2 3	Open. Hide. 62 35 51 47 62 62 62 54 44 62 34 19 22 14 28 18 23 28 28 27 24 24 38 38 56 62 62 62 62 59 62 59 49 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 59 59 62 62 62 56 50 49 43 36 48 48 54 56 54 54 54 54 62 59 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 54 54 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 43 62 56 62 46 56 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 58 58 58 58 58 47 58 58 47 58 58 54 54 58 58 58 58 58 58 54 58 58 54 58 54 54 54 58 58 58 58 54 58 58 54 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 33 49 58 58 52 54 58 58 58 58 58 58 58 58 54 52 53 58 58 58 58 58 58 58 49 52 58 49 49 58 58 58 58 54 51 48 58 58 58 52 51 41 58 58 49 50 58 51 58 50 58 50 50 51 47 58 51 49 39 58 58 51 52 58 50 54 37 58 50 58 50 58 36 39 58 41 33 54 31 58 49 54 38 41 43 41 49 53 51 51 52 58 58 40 33 58 40 54 53 54 50 50 53 58 58 58 50 52 52 58 58 58 50 53 34 42 53 23 58 58 32 51 29 47 34 32 49 58 37 53 53 45 53 53 53 51 38 38 51 52 51 35 26 54 40 51 52 53 37 49 53 39 53 53 47 39 33 53 34 49 40 33 54 53 41 46 34 41 30 35 40 47 31 29 41 31 23 41 51 33 37 41 51 26 38 45 37 42 42 54 35 45 23 33 42 39 42 52 41 34 54 54 47 35 30 52 34 35 51 51 52 32 47 47 28 31 31 32 53 31 53 31 40 30 37 31 15 40 32 52 42 31 34 25 52 31 32 31 32 15 53 30 35 33 30 26 33 51 31 31 31 31 28 37 28 31 31 24 35 25 30 32 31 38 33 30 26 27 21 21 51 46 14 18 30 30 31 24 8 30 30 36 33 40 40 31 32 46 46 46 14 27 8 38 33 38 33 19 32 23 44 30 33 31 31 30 31 31 26 30 37 26 25 32 30 24 18 31 31 43 20 31 29 30 38 29 29 24 29 31 23 30 31 30 32 36 34 37 34 48 31 31 30 31 31 31 31 29 31 19 23 21 23 31 12 23 31 25 31 28 18 32 32 20 48 21 18 22 32 48 30 16 35 11 11 29 11 18 23 37 42 31 29 48 32 32 22 20 18 21 14 11 22 37 42 32 31 32 48 22 11 9 5 10 9 8 6 6 9 11 17 16 8 5 13 22 5 9 15 33 28 11 10 19 21 32 17 19 17 32 11 25 39 25 26 43 43 31 11 25 26 48 48 39 21 11 11 30 34 22 28 8 9 9 17 15 27 28 47 21 10 18 21 32 20 24 20 28 17 20 17 21 34 28 19 15 20 17 16 4 8 19 4 17 17 32 15 19 12 3 6 16 24 27 28 14 27 7 15 22 24 7 9 9 7 20 28 24 24 28 13 20 4 14 8 22 10 20 23 21 21 10 6 6 5 18 8 8 14 28 26 30 5 4 6 16 8 12 13 8 11 16 7 8 3 2 6 8 6 10 13 16 9 5 6 3 3 7 27 15 6 7 8 22 7 8 17 6 3 1 3 13 4 4 9 6 4 17 5 3 1 7 13 11 30 26 20 15 4 4 7 3 5 2 5 2 5 7 8 4 6 17 17 8 6 4 5 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_89852767_89853835
seq2: B6Ng01-272P08.b_48_1107

seq1  GAATTCA-GTTCCTTTTGTCATTCTGCTTTCTGTCACAATAATAAAATAA  49
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTCCTTTTGTCATTCTGCTTTCTGTCACAATAATAAAATAA  50

seq1  TCACACCCTCTGCCATGTGATAGGCAGTGAGAGGCACTGTATTGGAAATA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACCCTCTGCCATGTGATAGGCAGTGAGAGGCACTGTATTGGAAATA  100

seq1  CAGTGAGTCTTCACCAGAAACTGAACCTGGCAGTTCTTTGATCTTGGACT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTCTTCACCAGAAACTGAACCTGGCAGTTCTTTGATCTTGGACT  150

seq1  TTCCAGCCTACAGGATTGTGAAATAATGAATTTATGCTCTCGTAAATAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCCTACAGGATTGTGAAATAATGAATTTATGCTCTCGTAAATAAC  200

seq1  CCAATTTCTGGCATTTTGTTATAGTAGTACTAAAAGATAAAGTTAATTGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTCTGGCATTTTGTTATAGTAGTACTAAAAGATAAAGTTAATTGA  250

seq1  ACAGAAAACTACATAATAATTTGCTGAAGAAAGTGTCTTTATCTCTTAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAACTACATAATAATTTGCTGAAGAAAGTGTCTTTATCTCTTAAA  300

seq1  TATAACAGGTTAGGTTACATAGTACCCCATTTACTTTTTATATGGAAACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACAGGTTAGGTTACATAGTACCCCATTTACTTTTTATATGGAAACT  350

seq1  CTTTTGTGTTCTGAGATTCATATTTATTTTGTCTTACATATTGTCAGGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTGTTCTGAGATTCATATTTATTTTGTCTTACATATTGTCAGGGT  400

seq1  TTAGATGTACAGGACATAGAGCACTGTTTTATTAAGCTAGAAAAGGAATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGTACAGGACATAGAGCACTGTTTTATTAAGCTAGAAAAGGAATG  450

seq1  ATACAAACAAATCCTGTTGGACTCTGGGCAATGGGGAAAAGGTGTAACAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAACAAATCCTGTTGGACTCTGGGCAATGGGGAAAAGGTGTAACAG  500

seq1  CAGTCCTTCTTTCTCTCTAAAAAATAAAATAAAATAAATGATAATAATGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTTCTTTCTCTCTAAAAAATAAAATAAAATAAATGATAATAATGA  550

seq1  TAATAATAATAATAAACTACATCAGAGTCTCAGTTCCACAAAATTTTTAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAATAATAAACTACATCAGAGTCTCAGTTCCACAAAATTTTTAG  600

seq1  GAAAGTAACATTGCTGTTTCCAGGGAGCATACTTGATTAGGGGAAGAAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTAACATTGCTGTTTCCAGGGAGCATACTTGATTAGGGGAAGAAGC  650

seq1  AAACTGAGAACTTCAGAGTGAAGATAATCATGAGGCAGAAGATCTCAAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGAACTTCAGAGTGAAGATAATCATGAGGCAGAAGATCTCAAGC  700

seq1  ACAGCTTGCGAATAGAAGCAAAGGAACACTGAAGAGATGCAGCCACAGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTGCGAATAGAAGCAAAGGAACACTGAAGAGATGCAGCCACAGGG  750

seq1  CCACTGCATGCATGAATCTCAGGTACAGGCCTCTCACAAGATG-AAGGAC  798
      ||||||||||||||||||||| ||||||||||||||||||||| ||||||
seq2  CCACTGCATGCATGAATCTCA-GTACAGGCCTCTCACAAGATGAAAGGAC  799

seq1  ATTGGTTGGACTAGCTTCAACTCACATAGCTTTGGTTTTTATGCACCTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTGGACTAGCTTCAACTCACATAGCTTTGGTTTTTATGCACCTTT  849

seq1  TCAAAGAAAATGTATTCCTAGTTTTTCCTCTTTGATAATCTAAAGATAAC  898
      || |||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TC-AAGAAAATGTATTCCTAGTTTTTCCTCTTTGATAATCTAAAGAT-AC  897

seq1  AAAATTCTCTGAAACTTATATTGTAGGTTCATTGCTTAATAGTTCATTGC  948
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAAATTCTCTGAAAC-TATATTGTAGGTTCATTGCTTAATAGTTCATTGC  946

seq1  CTTTCTCTCCCTGTGTAAGTTAAACACTATAGCTTCAAATTAGTTATTCA  998
      | |||||| ||||||||||||||||||||||||||| |||||||   |||
seq2  CCTTCTCT-CCTGTGTAAGTTAAACACTATAGCTTC-AATTAGT--ATCA  992

seq1  CATTAAAAGCTGAAGTTAATCTCCAGGCTA-TCTCAATTTTCCTTAATCA  1047
      |||| ||||||||||||||||| ||| ||| |||| |||||||||||  |
seq2  CATT-AAAGCTGAAGTTAATCT-CAGCCTATTCTC-ATTTTCCTTAACTA  1039

seq1  CCTGTGACTTAGTTCCATGAGG  1069
      |||||||||||||| |||||||
seq2  CCTGTGACTTAGTT-CATGAGG  1060

seq1: chr4_90025873_90027042
seq2: B6Ng01-272P08.g_67_1224 (reverse)

seq1  GTGTTTCATATATAAACAACACTAAAATCTACTTGCTGTTGACCGAGTTG  50
      ||||||| ||||| ||||||||||||||  ||| |||| ||||   ||||
seq2  GTGTTTC-TATAT-AACAACACTAAAATTCACTGGCTG-TGACGAGGTTG  47

seq1  TGGGTAGTGTTAGTTGGAAGATGGC-TCTTTTCTGGACAGATCACTCCAG  99
      ||||||||||||| | ||||||||| ||||||   |||||||||||||| 
seq2  TGGGTAGTGTTAGGTTGAAGATGGCTTCTTTTTCTGACAGATCACTCCA-  96

seq1  GACAGCATAATCTCATGGGAAGAGATTTTTTTTTTAATTGAATGGGATAG  149
      |||||||| ||||||| ||||||||||||||||   | ||||||||||||
seq2  GACAGCAT-ATCTCAT-GGAAGAGATTTTTTTT---AATGAATGGGATAG  141

seq1  AGAAAGGAAAACAAAGAACAAAAGAAAAAGGAAAAAGGGTGAATGGTCAG  199
      ||||||||||   ||||||||| |||||||| ||||||||||||||||||
seq2  AGAAAGGAAA--CAAGAACAAAGGAAAAAGG-AAAAGGGTGAATGGTCAG  188

seq1  GGTCTCTGTCATATAGTTGGGTTTTGACATAGATGTCAAATAATGAATGG  249
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  GGTCTCTGTCATATAGTTGG--TTTGACATAGATGTCAAATAATGAATGG  236

seq1  TGGGTA-CCGTTGCACATAGGTGAGGAGTACTTTAGTACTGTGTTGTGGT  298
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACCCGTTGCACATAGGTGAGGAGTACTTTAGTACTGTGTTGTGGT  286

seq1  AGCCATGGCAACAGACACAAGAAGGTCCTTGGCCCCAGGGATAACATTAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGGCAACAGACACAAGAAGGTCCTTGGCCCCAGGGATAACATTAT  336

seq1  CCCTGGATTCAGAGGCTATCTGGAAACTGACTCTGATGCTAACAGGTAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGATTCAGAGGCTATCTGGAAACTGACTCTGATGCTAACAGGTAAG  386

seq1  AGACAATGAAGTTTTGTTAGGGGAGATATTATTTGTGGACAATCAGGTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGAAGTTTTGTTAGGGGAGATATTATTTGTGGACAATCAGGTTG  436

seq1  CAGTGGGGAATGATGCTTCAATATGGCACCTCACGTGCTGCTTAAGGTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGGAATGATGCTTCAATATGGCACCTCACGTGCTGCTTAAGGTAC  486

seq1  TCCAATCTGGCAAAGTTTTTGTTGCACCTGGGACATGGGTAGGGCCTCAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATCTGGCAAAGTTTTTGTTGCACCTGGGACATGGGTAGGGCCTCAC  536

seq1  CACACTGTGCTTTTGTTTGTGTCTCTTGAGATCTTTTGAGCAGGAGATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTGCTTTTGTTTGTGTCTCTTGAGATCTTTTGAGCAGGAGATTT  586

seq1  TCCATGTGCACCCAGGCTTATTGCATGCATAAGGCTTCTCACCAGTGTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTGCACCCAGGCTTATTGCATGCATAAGGCTTCTCACCAGTGTGT  636

seq1  TTCTTCATGTGTTCTTCGAGGTGTTGAGCCCTTTTGTAAGATTTCTGACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATGTGTTCTTCGAGGTGTTGAGCCCTTTTGTAAGATTTCTGACA  686

seq1  GTTCGCATAGGTACAGGAGTAGCACTCAAAGGATGAGGGTTCTTCTGGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGCATAGGTACAGGAGTAGCACTCAAAGGATGAGGGTTCTTCTGGCA  736

seq1  CATAGGGCTCTGGGGATTGAGGTCTAACTTCATCTCTGGATGCTGTCCCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGGCTCTGGGGATTGAGGTCTAACTTCATCTCTGGATGCTGTCCCT  786

seq1  GGACTAGATTGGAAGCTGAAGAGTTTTCCTGAGGTTGACTTTGGATCGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAGATTGGAAGCTGAAGAGTTTTCCTGAGGTTGACTTTGGATCGAT  836

seq1  CAAAGGGGAACTTGAAGGATATGAGGATTCACCGACATATGGAACTTGGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGGAACTTGAAGGATATGAGGATTCACCGACATATGGAACTTGGT  886

seq1  AACTAAGTGAAGTCATCTGAGAATCAAGGCTTTCTTCAATATTGAGTGTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGTGAAGTCATCTGAGAATCAAGGCTTTCTTCAATATTGAGTGTT  936

seq1  CCATTCTGACTTGGGTAAACATCTTGATCAATAGAGGTCCTCATCTGACC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGACTTGGGTAAACATCTTGATCAATAGAGGTCCTCATCTGACC  986

seq1  CAAGTAGAATGTTTCTTCAGAACTGGGACTTGTCTCCAAAGGGCAAGCCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAGAATGTTTCTTCAGAACTGGGACTTGTCTCCAAAGGGCAAGCCA  1036

seq1  GGTTGTCTTCTGCACTAGATCTTGTCCTCTTAGACCCATGAAGAGTTGTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCTTCTGCACTAGATCTTGTCCTCTTAGACCCATGAAGAGTTGTG  1086

seq1  TCAAAACTGGAGGTTGGTATCTGAAAATCAGAGAGAGGCTGGCCACCAAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACTGGAGGTTGGTATCTGAAAATCAGAGAGAGGCTGGCCACCAAA  1136

seq1  TGGACTTGTCACCTGGGAATTC  1170
      ||||||||||||||||||||||
seq2  TGGACTTGTCACCTGGGAATTC  1158

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Alignment Information