BAC Information

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BAC

Clone NameB6Ng01-274J11
Chromosome4 (Build37)
Map Location 81,279,551 - 81,280,646
singlet/doubletsinglet
Overlap genenone
Upstream geneTyrp1, D4Bwg0951e, Mpdz, LOC100040131
Downstream geneLOC100040144, EG668895, LOC100040164, EG545641, Nfib
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274J11.bB6Ng01-274J11.g
ACCGA075852GA075853
length1,1801,094
definitionB6Ng01-274J11.b B6Ng01-274J11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgggcaccgctggcttctgcaggctctggatacctgggtttgc
aattttagctgcccagttgtaccccctaaccaaggaaggggaggtgtttg
tatggaccccagagagcctttaaagaaattaaaaaggctctactaatggc
tccagccttggccttgcctgacctgactttgaaaccttggaaaaggtcag
tggcttaagatagaccctgttgccagcgggtggttttcttgtctgaaagc
tattgctgccatagctctatttgtcaaggatgctgataaggatcagcctt
ggcctgggagtctgagctggtccacagatggcagtaacttcatggttgaa
agtaagaagaaggcaggggcagcagtggtggacagaaagcaagtgatctg
ggccaacagcctccctgaagggacataggcccaggaagctgaacttgtgg
ctttgataaagtaaaaactttgcatttctggaactatagatgctggttag
ctggagctaagaaattagcggtgattaagaagagaccagcatcattgagg
tgacatcttctgggaagtgttttctgagaggacagaggctgtgatccaga
gatagccaaagttgtacccagtgcagcagcaggagttggtaatgtgtaag
agtcacccaggtggtactagttttgaaggcatgaaggggtcacgcagagc
agctgaagctcagcactgtgataggccatggaaggccattggtaaaggtg
cagtgcagcctcagttgcaattgatggttcagacagaaggggtcatgaaa
aggacttgatgcttggcaccatgaagagagcctatgagaggctattggtg
aagcctagttacagcggaagacagcagtgttttgtagatgccagtaccat
gagatgactaccaagaacagcagcagcaatggtgtacaggcagctggagc
ctagaagacagttgtgtgatacaaagggcaggctggagaagtgatccaag
cccttggaggagcccagagacgtgagttggagtttggggtacccagtatc
gatctgaataatggacctgcctttgtgccagtaagtcagactggtcagaa
tattggattgattggagttacattgtgcattctagctcaggacggtggaa
gaatgaatgaccattaagagaactctaact

gaattcatttacctcccactctgagaagcaagctgaaataaggtagaatt
ctataaaacaaaactgtttctttttcagtcatttgtagagttgtatcaat
atcagaagggtctcttgcactataatcctgtgctcataataataatgtat
tgttattttatctatttcactgcccaagctcttctctggagctcctgttt
ctctctctggtatgtcatcaccgttttgtgctttctttactctgagatat
ttcaagatgccttgaactcattttttgtttttctttgttcttatacttac
tgaatctattaatatatttagataagcttttctctccatgacccactggt
tttggagacaggttttccctatgaagccttaagtttctctatgaagccct
ggctctcccaaaacttactatcgtagaccaggctgccctcagagacccac
ctgtcctgcttctgactgttggcattaaaagtgtgccccaccacatccag
catgtatttggataaaacttggtgctctataaatatttgaaaatatttcc
cagtctctttctttttaaataactttcacattcacaattctacatggttt
taataaagatttctgtatgactgccctctaaatttgtgtctctatatcca
cagaatattcttcagattttatccaagaggcttcttcccacagtctcttc
ttgatggtgctcagccataagtgagacatccacatcacacctactctctg
aaggtgtggagagcatctcagaggatggggtggaaaggtcagagatctgg
gaggatcgagaatggggtgagacagtatcctctggatataacaagactgt
tactcttccagtcacttttctattgctttcaagagacacccattatcaag
gcaattcttctgaaataaagcatgtaactggtggcttgcatacagtctca
aatgtttagtttattatcatcatggcagaagcatagtggcactcaagcag
cccttggaacagtactgaagaaatatatcctgaatacacctgccagagag
agaagaactctggattgcatgggcttttgaatctcaagccaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_81279551_81280646
seq2: B6Ng01-274J11.g_66_1159 (reverse)

seq1  GGGTGGGCCTTGAGATTTCAAAAGCCCATGCCAAACCAAGAGT--CTCTC  48
      ||||||  ||||||| |||||||||||||||  || | |||||   ||||
seq2  GGGTGG--CTTGAGA-TTCAAAAGCCCATGC--AATCCAGAGTTCTTCTC  45

seq1  TCTCTGCCA-GTGTA-TCAGGATATATTTC-TCAGTAACTGTTCCAAGGG  95
      |||||| || ||||| |||||||||||||| ||||| |||||||||||||
seq2  TCTCTGGCAGGTGTATTCAGGATATATTTCTTCAGT-ACTGTTCCAAGGG  94

seq1  CTGCTTGAGTGCCACTATGCTTCCTGCCATGATGATAATAAACTAAACAT  145
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTGCTTGAGTGCCACTATGCTT-CTGCCATGATGATAATAAACTAAACAT  143

seq1  TTGAGACTGTATGCAAGCCACCAGTTACATGCTTTATTTCAGAAGAATTG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACTGTATGCAAGCCACCAGTTACATGCTTTATTTCAGAAGAATTG  193

seq1  CCTTGATAATGGGTGTCTCTTGAAAGCAATAGAAAAGTGACTGGAAGAGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATAATGGGTGTCTCTTGAAAGCAATAGAAAAGTGACTGGAAGAGT  243

seq1  AACAGTCTTGTTATATCCAGAGGATACTGTCTCACCCCATTCTCGATCCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCTTGTTATATCCAGAGGATACTGTCTCACCCCATTCTCGATCCT  293

seq1  CCCAGATCTCTGACCTTTCCACCCCATCCTCTGAGATGCTCTCCACACCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATCTCTGACCTTTCCACCCCATCCTCTGAGATGCTCTCCACACCT  343

seq1  TCAGAGAGTAGGTGTGATGTGGATGTCTCACTTATGGCTGAGCACCATCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAGTAGGTGTGATGTGGATGTCTCACTTATGGCTGAGCACCATCA  393

seq1  AGAAGAGACTGTGGGAAGAAGCCTCTTGGATAAAATCTGAAGAATATTCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGACTGTGGGAAGAAGCCTCTTGGATAAAATCTGAAGAATATTCT  443

seq1  GTGGATATAGAGACACAAATTTAGAGGGCAGTCATACAGAAATCTTTATT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATATAGAGACACAAATTTAGAGGGCAGTCATACAGAAATCTTTATT  493

seq1  AAAACCATGTAGAATTGTGAATGTGAAAGTTATTTAAAAAGAAAGAGACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCATGTAGAATTGTGAATGTGAAAGTTATTTAAAAAGAAAGAGACT  543

seq1  GGGAAATATTTTCAAATATTTATAGAGCACCAAGTTTTATCCAAATACAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATATTTTCAAATATTTATAGAGCACCAAGTTTTATCCAAATACAT  593

seq1  GCTGGATGTGGTGGGGCACACTTTTAATGCCAACAGTCAGAAGCAGGACA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATGTGGTGGGGCACACTTTTAATGCCAACAGTCAGAAGCAGGACA  643

seq1  GGTGGGTCTCTGAGGGCAGCCTGGTCTACGATAGTAAGTTTTGGGAGAGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTCTCTGAGGGCAGCCTGGTCTACGATAGTAAGTTTTGGGAGAGC  693

seq1  CAGGGCTTCATAGAGAAACTTAAGGCTTCATAGGGAAAACCTGTCTCCAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTTCATAGAGAAACTTAAGGCTTCATAGGGAAAACCTGTCTCCAA  743

seq1  AACCAGTGGGTCATGGAGAGAAAAGCTTATCTAAATATATTAATAGATTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTGGGTCATGGAGAGAAAAGCTTATCTAAATATATTAATAGATTC  793

seq1  AGTAAGTATAAGAACAAAGAAAAACAAAAAATGAGTTCAAGGCATCTTGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTATAAGAACAAAGAAAAACAAAAAATGAGTTCAAGGCATCTTGA  843

seq1  AATATCTCAGAGTAAAGAAAGCACAAAACGGTGATGACATACCAGAGAGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTCAGAGTAAAGAAAGCACAAAACGGTGATGACATACCAGAGAGA  893

seq1  GAAACAGGAGCTCCAGAGAAGAGCTTGGGCAGTGAAATAGATAAAATAAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGGAGCTCCAGAGAAGAGCTTGGGCAGTGAAATAGATAAAATAAC  943

seq1  AATACATTATTATTATGAGCACAGGATTATAGTGCAAGAGACCCTTCTGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATTATTATTATGAGCACAGGATTATAGTGCAAGAGACCCTTCTGA  993

seq1  TATTGATACAACTCTACAAATGACTGAAAAAGAAACAGTTTTGTTTTATA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATACAACTCTACAAATGACTGAAAAAGAAACAGTTTTGTTTTATA  1043

seq1  GAATTCTACCTTATTTCAGCTTGCTTCTCAGAGTGGGAGGTAAATGAATT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCTTATTTCAGCTTGCTTCTCAGAGTGGGAGGTAAATGAATT  1093

seq1  C  1096
      |
seq2  C  1094


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