BAC Information

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BAC

Clone NameB6Ng01-276I21
Chromosome4 (Build37)
Map Location 43,022,254 - 43,022,901
singlet/doubletsinglet
Overlap geneFancg
Upstream geneLOC100039863, LOC100042555, 1700045I11Rik, LOC100039894, LOC100039909, EG545605, LOC674214, LOC100038965, LOC100039053, LOC100039193, LOC100039374, LOC100039930, LOC100038993, LOC100039939, Ccl19-ps3, Ccl21c, LOC100039323, LOC665845, LOC100039973, LOC100039986, 4933409K07Rik, LOC100039344, LOC100039995, EG623054, Ccl19-ps2, LOC100039331, LOC100039131, LOC100040035, LOC100040048, Il11ra2, LOC665962, LOC545614, 1700008B15Rik, Ccl19, Ccl21b, LOC100039205, LOC433698, BC049635, N28178, Dnajb5, 1700022I11Rik, Vcp
Downstream genePigo, Stoml2, B230312A22Rik, Unc13b, 4930417M19Rik, Rusc2, 4833436C18Rik, Tesk1, Cd72, Sit1, Rmrp, LOC622404, E130306D19Rik, Car9, Tpm2, Tln1, Creb3, Gba2, 1110029E03Rik, LOC100039672, LOC100040179, Npr2, Spag8, Hint2, Serf2-ps, 4930412F15Rik, Olfr70, Olfr71, LOC100039781, 5430416O09Rik, A630077J23Rik, GA_x5J8B7W5BNN-892919-892147, Olfr159, Olfr29-ps1, Olfr156, LOC100040268, Olfr155, Reck, Glipr2, Ccin
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276I21.bB6Ng01-276I21.g
ACCGA077309GA077310
length1,177653
definitionB6Ng01-276I21.b B6Ng01-276I21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatatttatattatt
gtggctattgagaaggtgttgtttcctaatttcttctcagctgtttattc
tttgtgtagaagaaagggccattgacttgtttgagtattttatatcagct
acttcacggaagctgtttatcaggttaggaggttctctcgttgattttta
aggttcacttaatataactattccattactctggcaaggaattgactcct
ttgcaaatgtattcccctgggatcgct
gaattcagtttttgctcagacaactttggaaagagcaggaagttctctaa
atctcctgaaaatcacctcttcaaatgttcctgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaaaagaagaag
gaattaagctactgaaagacaatcccacccagtctcttctgggctttacg
caggactccataagccctaggaaaatcacctcaatcctagaacctcgtaa
aagaagctcatctttgaatgctggtgatttgcggggtggtctgagggggg
aactgaaccttctggaaggtcgttcttaccttgtagagtgaggaggagtt
ccctaagcccttccagtgtgtcttgggccgattgctgtcgcctcagagag
ggacgagaatccctggtgagttgctgaaattatgtagggaggcattaagg
atcagtctttctcccttgtaacagagacagggagggacacatattcctgt
cacttctgtttctaaggacggaggtcaagctctgttccttccccctagac
tagggtgagatcattacaaagccgctttctgacatcttgagggtacaatg
tgagagtcccagcaaccacatttaccttagcctgtctaacaagctggtcg
ttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_43022254_43022901
seq2: B6Ng01-276I21.g_68_720

seq1  GAATTCAGTTTTTGCTCAGACAACTTTGGAAAGAGCAGGAAGTTCTCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTTTGCTCAGACAACTTTGGAAAGAGCAGGAAGTTCTCTAA  50

seq1  ATCTCCTGAAAATCACCTCTTCAAATGTTCC----TGTGTGTGTGTGTGT  96
      |||||||||||||||||||||||||||||||    |||||||||||||||
seq2  ATCTCCTGAAAATCACCTCTTCAAATGTTCCTGTGTGTGTGTGTGTGTGT  100

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAAGAAGAAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAAAGAAGAAG  150

seq1  GAATTAAGCTACTGAAAGACAATCCCACCCAGTCTCTTCTGGGCTTTACG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAGCTACTGAAAGACAATCCCACCCAGTCTCTTCTGGGCTTTACG  200

seq1  CAGGACTCCATAAGCCCTAGGAAAATCACCTCAATCCTAGAACCTCGTAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTCCATAAGCCCTAGGAAAATCACCTCAATCCTAGAACCTCGTAA  250

seq1  AAGAAGCTCATCTTTGAATGCTGGTGATTTGCGGGGTGGTCTGAGGGGGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTCATCTTTGAATGCTGGTGATTTGCGGGGTGGTCTGAGGGGGG  300

seq1  AACTGAACCTTCTGGAAGGTCGTTCTTACCTTGTAGAGTGAGGAGGAGTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAACCTTCTGGAAGGTCGTTCTTACCTTGTAGAGTGAGGAGGAGTT  350

seq1  CCCTAAGCCCTTCCAGTGTGTCTTGGGCCGATTGCTGTCGCCTCAGAGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGCCCTTCCAGTGTGTCTTGGGCCGATTGCTGTCGCCTCAGAGAG  400

seq1  GGACGAGAATCCCTGGTGAGTTGCTGAAATTATGTAGGGAGGCATTAAGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGAGAATCCCTGGTGAGTTGCTGAAATTATGTAGGGAGGCATTAAGG  450

seq1  ATCAGTCTTTCTCCCTTGTAACAGAGACAGGGAGGGACACATATTCCTGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTCTTTCTCCCTTGTAACAGAGACAGGGAGGGACACATATTCCTGT  500

seq1  CACTTCTGTTTCTAAGGACGGAGGTCAAGCTCTGTTCCTTCCCCCTAGAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGTTTCTAAGGACGGAGGTCAAGCTCTGTTCCTTCCCCCTAGAC  550

seq1  TAGGGTGAGATCATTACAAAGCCGCTTTCTGACATCTTGAGGGTACAAGG  596
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAGGGTGAGATCATTACAAAGCCGCTTTCTGACATCTTGAGGGTACAATG  600

seq1  TGAGAGTCCCAGCAACCACA-TTACCTTAGCCTGTCTAACAAGCTGGTCG  645
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGAGAGTCCCAGCAACCACATTTACCTTAGCCTGTCTAACAAGCTGGTCG  650

seq1  TTC  648
      |||
seq2  TTC  653