BAC Information

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BAC

Clone NameB6Ng01-281A07
Chromosome4 (Build37)
Map Location 30,162,721 - 30,163,437
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC665185, LOC619906, LOC100040864
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281A07.bB6Ng01-281A07.g
ACCGA080605GA080606
length947436
definitionB6Ng01-281A07.b B6Ng01-281A07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgcagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cggtcccgagttttcttgtattttttcgtcccgggtttcggcaccaattc
ttacacgcgttctcacgcccggccaggaaagaacacaacaaaccagaatc
ttctgcggcaaaactttattgcttacatcttcaggagccaggagcgcaaa
cccccagccccaaaagcgaaagccaccccaatcttacatctttaggagcc
agagctccggcgcgccaaagcgcagagcgcgctctattgtttacatcttt
aggagcaagcgagcaggcgccagagccagcgagagaaatggcggaaaccc
cgtcccctttaaggaggagttatccttcgcttaggacgcatcactccctg
attggctgcagcccatggccgagctgacgttcacgggaaaggcagagtac
aagtagtcgtaaaatacccttggcacatgcgcagattatttgtttaccac
ttagaacacaggatgtcagcgccatcttgtgacggcgaatgtgggggcgg
ctcccaacaatagatgatagatagatgatagatagatagatagatagata
gatagatagatagatagagatgcagatgcagatacagatgcagatacaga
tacagatagatacagatacaaataagagcaaataaggctttcctttagat
aaagaaccacttaggagaaagggtttgaaactgaaaacacagcatgttta
agcaagacatcaatagatcttggtatagattcagtaatggtttgagcatt
gtgtctttcccattcaatagctgggttgatatttattcagccacgaaagt
cagaacaattaaactttctcaaattaattactgtgtggtgtatcgtt

gaattcaggacaggacctcaaaaagggcaggaacctggatgtaagagttg
atgcagaggccaaagatgggtgcttcttactgacttgctcagccagcttt
cttataatgttcaggaccttctctagctcctccattatgggccctgtgtt
ccatcctatagatggatgtgagcatctacttctgtatttgccaggcactg
gcatagcctcacaagacacagctatatcagggtcccttcagcaaaatctt
gctggcatatgcaatagtgtctgggtttggtggaacaacaatatgaacta
aacagtacccgcagagcttgtgtctctagctgcatatgtagcagaagata
gcctagttggccatcattaggaagaggctcctaggtcttgcaaactttat
ataccccagtacaggtgaacgccagggccaagaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30162721_30163437
seq2: B6Ng01-281A07.b_270_992

seq1  ACATCTTCAGGAGCCAGGAGCGCAAACCCCCAGCCCCAAAAGCGAAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCAGGAGCCAGGAGCGCAAACCCCCAGCCCCAAAAGCGAAAGCC  50

seq1  ACCCCAATCTTACATCTTTAGGAGCCAGAGCTCCGGCGCGCCAAAGCGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAATCTTACATCTTTAGGAGCCAGAGCTCCGGCGCGCCAAAGCGCA  100

seq1  GAGCGCGCTCTATTGTTTACATCTTTAGGAGCAAGCGAGCAGGCGCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGCGCTCTATTGTTTACATCTTTAGGAGCAAGCGAGCAGGCGCCAGA  150

seq1  GCCAGCGAGAGAAATGGCGGAAACCCCGTCCCCTTTAAGGAGGAGTTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCGAGAGAAATGGCGGAAACCCCGTCCCCTTTAAGGAGGAGTTATC  200

seq1  CTTCGCTTAGGACGCATCACTCCCTGATTGGCTGCAGCCCATGGCCGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGCTTAGGACGCATCACTCCCTGATTGGCTGCAGCCCATGGCCGAGC  250

seq1  TGACGTTCACGGGAAAGGCAGAGTACAAGTAGTCGTAAAATACCCTTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTTCACGGGAAAGGCAGAGTACAAGTAGTCGTAAAATACCCTTGGC  300

seq1  ACATGCGCAGATTATTTGTTTACCACTTAGAACACAGGATGTCAGCGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCGCAGATTATTTGTTTACCACTTAGAACACAGGATGTCAGCGCCA  350

seq1  TCTTGTGACGGCGAATGTGGGGGCGGCTCCCAACAATAGATGATAGATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGACGGCGAATGTGGGGGCGGCTCCCAACAATAGATGATAGATAG  400

seq1  ATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAGATGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAGATGCA  450

seq1  GATGCAGATACAGATGCAGATACAGATACAGATAGATACAGATACAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGATACAGATGCAGATACAGATACAGATAGATACAGATACAAATA  500

seq1  AGAGCAAATAAGGC-TTCCTTTAGATAAAGAACCACTTAGGAGAAAGGGT  549
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGAGCAAATAAGGCTTTCCTTTAGATAAAGAACCACTTAGGAGAAAGGGT  550

seq1  TTGAAACTG-AAACACAGCATGTTTAAGCAAGACATCAATAGATCTTGGT  598
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACTGAAAACACAGCATGTTTAAGCAAGACATCAATAGATCTTGGT  600

seq1  ATAGATTCAGTAATGG-TTGAGCATTGTGTCTTTCCCA-TCAATAGCT-G  645
      |||||||||||||||| ||||||||||||||||||||| ||||||||| |
seq2  ATAGATTCAGTAATGGTTTGAGCATTGTGTCTTTCCCATTCAATAGCTGG  650

seq1  GTTGATATTTATTCAGCCACG-AAGTCAGAACAATT-AACTTTCTCAAAA  693
      ||||||||||||||||||||| |||||||||||||| ||||||||| |||
seq2  GTTGATATTTATTCAGCCACGAAAGTCAGAACAATTAAACTTTCTC-AAA  699

seq1  TTATTTACTGTGTTGTGTATCGTT  717
      ||| ||||||||| ||||||||||
seq2  TTAATTACTGTGTGGTGTATCGTT  723


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