BAC Information

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BAC

Clone NameB6Ng01-282L06
Chromosome4 (Build37)
Map Location 25,319,522 - 25,320,662
singlet/doubletsinglet
Overlap genenone
Upstream geneF730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019
Downstream geneLOC625732, Fut9, LOC100040780, Hn1-ps1, Manea, Bhmt-ps1, LOC665079
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282L06.bB6Ng01-282L06.g
ACCGA081852GA081853
length1,1411,110
definitionB6Ng01-282L06.b B6Ng01-282L06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaccagggactgtagagaggatcattttagaaatgtagtcagaa
ataatcgtattcatatataaagatacttctcagaccctctgaatttgaga
ttatccattgaattagcaggtttgtccagagcctctcagcatgccccact
acatgtgtgcctcaaagttggactttgaaatgaagggaaaagtaaaaatc
tagtcacttacctgtttccctagcaggaattaattttttttttttagatt
gtaatgacaacttttttccttgtcttttacccttccaaaaccaccccaca
caccctcctctgctctcctttactgcacccataacatttcaccaacatga
ctatccttttatttcttctgattcatgatgctgcccctgaacccatggct
tgagtttttctcacaagcaagccccagagaccagcattatttaacaactt
ttattattaagtgcagaagatggctgcacttaaatggacacctagatgtt
cctggtgatcagcattggtgaagcaactctagagagaaggcactacaggt
gaactattgatttcagaaaatcattcattccaacaccattttttcattat
tttatttatttacaatccagctgttgtctacttctcagtgccccctctca
ctctttgaatgttttaaatatgaccagatttctttgatgatagaaattga
tctcacttctgtaaactccctttttgttttctctttctctctccctacaa
tcttaatttgtgtaaattttctgtattaagtgcctcatatttgtaaatac
ctcacatgaagcatatctcttatatcaggagaagtagtgttaaaaagctt
acagaaacagtgattgtgcagtctttagcaaggatatcttgtctgtagaa
tgtttttctattcttcccaccagcaagcatttccccaagaaaggaaggaa
aacttattatttgcatgtctgaaagcatcttttcttctacttgaatacgt
gaaatgagaaaatgttttgagtttggaatcatttttcttttcttcaatct
gcagtgttttctgtgaaaagctcatgcattttcataccttttttggaaca
tgaacacattaaacttacgtgagtctttaagtacgctattc

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtataagcttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctttgccctctagtgagtctagctaagggcttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttctttcttgttcccactttggttaattttcacccctgagtttgat
tatttcctgccgtctacttctcttgggttgaattttgctttccttttttt
ctagagcttttagatgttgttgtaagctgctagtatgtgctctctcccgt
ttcttccttggagtactcagagctatgagttccctcttagaaatgcctca
ttgggtccaaaaggtttggtaacgtagtggcttcatttcatttatacctc
taaaaggctttaatttcttactttaattcatccttgacatgtatccattt
gatagaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_25319522_25320662
seq2: B6Ng01-282L06.b_48_1188

seq1  GAATTCCACCAGGGACTGTAGAGAGGATCATTTTAGAAATGTAGTCAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCAGGGACTGTAGAGAGGATCATTTTAGAAATGTAGTCAGAA  50

seq1  ATAATCGTATTCATATATAAAGATACTTCTCAGACCCTCTGAATTTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCGTATTCATATATAAAGATACTTCTCAGACCCTCTGAATTTGAGA  100

seq1  TTATCCATTGAATTAGCAGGTTTGTCCAGAGCCTCTCAGCATGCCCCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCATTGAATTAGCAGGTTTGTCCAGAGCCTCTCAGCATGCCCCACT  150

seq1  ACATGTGTGCCTCAAAGTTGGACTTTGAAATGAAGGGAAAAGTAAAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGTGCCTCAAAGTTGGACTTTGAAATGAAGGGAAAAGTAAAAATC  200

seq1  TAGTCACTTACCTGTTTCCCTAGCAGGAATTAATTTTTTTTTTTTAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACTTACCTGTTTCCCTAGCAGGAATTAATTTTTTTTTTTTAGATT  250

seq1  GTAATGACAACTTTTTTCCTTGTCTTTTACCCTTCCAAAACCACCCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGACAACTTTTTTCCTTGTCTTTTACCCTTCCAAAACCACCCCACA  300

seq1  CACCCTCCTCTGCTCTCCTTTACTGCACCCATAACATTTCACCAACATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCCTCTGCTCTCCTTTACTGCACCCATAACATTTCACCAACATGA  350

seq1  CTATCCTTTTATTTCTTCTGATTCATGATGCTGCCCCTGAACCCATGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTTTTATTTCTTCTGATTCATGATGCTGCCCCTGAACCCATGGCT  400

seq1  TGAGTTTTTCTCACAAGCAAGCCCCAGAGACCAGCATTATTTAACAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTTCTCACAAGCAAGCCCCAGAGACCAGCATTATTTAACAACTT  450

seq1  TTATTATTAAGTGCAGAAGATGGCTGCACTTAAATGGACACCTAGATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTAAGTGCAGAAGATGGCTGCACTTAAATGGACACCTAGATGTT  500

seq1  CCTGGTGATCAGCATTGGTGAAGCAACTCTAGAGAGAAGGCACTACAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGATCAGCATTGGTGAAGCAACTCTAGAGAGAAGGCACTACAGGT  550

seq1  GAACTATTGATTTCAGAAAATCATTCATTCCAACACCATTTTTTCATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATTGATTTCAGAAAATCATTCATTCCAACACCATTTTTTCATTAT  600

seq1  TTTATTTATTTACAATCCAGCTGTTGTCTACTTCTCAGTGCCCCCTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTACAATCCAGCTGTTGTCTACTTCTCAGTGCCCCCTCTCA  650

seq1  CTCTTTGAATGTTTTAAATATGACCAGATTTCTTTGATGATAGAAATTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGAATGTTTTAAATATGACCAGATTTCTTTGATGATAGAAATTGA  700

seq1  TCTCACTTCTGTAAACTCCCTTTTTGTTTTCTCTTTCTCTCTCCCTACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTTCTGTAAACTCCCTTTTTGTTTTCTCTTTCTCTCTCCCTACAA  750

seq1  TCTTAATTTGTGTAAATTTTCTGTATTAAGTGCCTCATATTTGTAAATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATTTGTGTAAATTTTCTGTATTAAGTGCCTCATATTTGTAAATAC  800

seq1  CTCACATGAAGCATATCTCTTATATCAGGAGAAGTAGTGTTAAAAAGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATGAAGCATATCTCTTATATCAGGAGAAGTAGTGTTAAAAAGCTT  850

seq1  ACAGAAACAGTGATTGTGCAGTCTTTAGCAAGGATATCTTGTCTGTAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACAGTGATTGTGCAGTCTTTAGCAAGGATATCTTGTCTGTAGAA  900

seq1  TGTTTTTCTATTCTTCCCACCAGCAAGCATTTCCCCAAGAAAGGAAGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCTATTCTTCCCACCAGCAAGCATTTCCCCAAGAAAGGAAGGAA  950

seq1  AACTTATTATTTGCATGTCTGAAAGCATC-TTTCTTCTACTTGAATACGT  999
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AACTTATTATTTGCATGTCTGAAAGCATCTTTTCTTCTACTTGAATACGT  1000

seq1  G-AATGAGAAAATG-TTTGAGTTTGGAAATCA-TTTTCTTT--CTCAATC  1044
      | |||||||||||| ||||||||||| ||||| ||||||||   ||||||
seq2  GAAATGAGAAAATGTTTTGAGTTTGG-AATCATTTTTCTTTTCTTCAATC  1049

seq1  TGCAGGTGTTTCTGGTGAAAAGCCTCATGCCATTTTCATTACTTTTT--G  1092
      |||| ||||||   |||||||| |||||| |||||||||  ||||||  |
seq2  TGCA-GTGTTTTCTGTGAAAAG-CTCATG-CATTTTCATACCTTTTTTGG  1096

seq1  GACATG-ACACATTTTAAAACTTTACGTGAGCCTTTTAAGTACGCTATTC  1141
       ||||| |||||||   |||| ||||||||| | ||||||||||||||||
seq2  AACATGAACACATT---AAAC-TTACGTGAGTC-TTTAAGTACGCTATTC  1141


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