BAC Information

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BAC

Clone NameB6Ng01-283C16
Chromosome4 (Build37)
Map Location 86,047,070 - 86,204,547
singlet/doubletdoublet
Overlap geneAdamtsl1, 4930500O09Rik
Upstream geneA930009N24, LOC668052
Downstream geneRraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283C16.bB6Ng01-283C16.g
ACCGA082195GA082196
length1,152904
definitionB6Ng01-283C16.b B6Ng01-283C16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,047,070 - 86,048,221)(86,203,645 - 86,204,547)
sequence
gaattccttacttctctcttggctgggcagctcagaaataatgagttccc
tgtacattttgtttccaaggagatagaaccaaaaattcattcgaggcctt
tctagaccctggcaggaaccgtgtacaatgtgtgactctttgaagtggta
tcaagacagataaatcagcataagtctgcgtgtctgttgtcctgccagct
tcctgagcccagtaaagggatttgggccaagcagaaggtggccatggtgc
tcctatatgcacaacaaatactgcacatcctcttaattccagccctataa
tcttgttcccaaccataagaaaccttcctagcccctcaaatcctccaaca
gttaattcacagtgatagaatggcgattccaggtatcacacggttatagt
gaagtgcttctgctaaggacactaaaatcatcccaatgacagtataactg
cagagagttaaaaacaataccaaaaaaagtgaagcagagtaatcaaagct
tttactaagaaaccattgcagaactctttgctttcagaacctaaccgtgc
tccatacaaaacttgatttggttatataaataatatgttttggtctctgt
atccatatgttccatattcagggattcaaccaggtacagatgaaaagtag
tcaggaaaaagaaacctggctttactcaacacacagtctctatgtgctgt
tactccttaaataacacggcatagcagctatttacatactatttgcataa
ctagatataactggaagcacactgaaggatatgtgtgttacatgtttcat
gttacatgttgattctgcaccatttgacacagaggctaagacattttctg
ccttcaacacccaaaggggtccagaaactgtcttcccagacgtaccaaag
gggtaagtgttccatttggggacggacataaaatttgtttatattttcat
aattcatgggactcctgccgtgcagagagctgccttttgctctgctatgt
taaaacaaaaaagacagccgggcgtgtggcgcacacctttaagcccagca
ctcgggaggcagaagcagcagatttctgagtcaagtcagctggatctaca
aagttgagttcaggaacagccaggctataccgagaaatccctgttctcga
aa

gaattcagggtcaatattctggaggtccgggcatgcatttcctccagacg
gacaatgtgtcctagggatggaaagtgccacccgacaagatacttttcat
tgtctttgcattatgtgaccgtgctgttggttaactctgggactcggagg
cttcctaaagccctccaaggtatcttccatcttccttccaagttccagtg
ggagagtccctgtcttgggtctgccaggtgagatactaggtgaagtctga
cctcacaggaggcccttatgatgtcattgccacctcaagatgccctcctc
tgtgactttgaaggtcatagaggactcagtcctgggccctgtggcttgca
ggggccaggctgtgctggcaggtgggtgcttcccactggccgcagtggca
gcagcttacagacgtgagccggcctggcttgctgtctgtgctaagtgctg
cctgtttgcccaaggccagcctcaggaaaggaatagactacagaattttg
caaaagggccacctaagtttccttctgagcaaaacagcatcggtcaaggc
accgaagaagtgtgatcgttgtcccaggcagctgggatcctctaggcgat
tgccttagtggaaagtccgaggtgaaggatggggaagaggacttgcatct
gcaacctgtgctcctgcgggtaaggtagtcctcccaagggcaatctgggg
aggggagcctgattttcacactccctagggtgccaagcccctttcctgga
acgaagacaggatgtgtcttcttcatcccgctgcttcgctaggcagcatc
gcactggattcgggttttaaactgcaacattgttgactaatatttgatgc
acacatgtcgaatcagcgctgatcaggtagtgtgtgtgtgtgtgttttgt
gtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_86047070_86048221
seq2: B6Ng01-283C16.b_44_1195

seq1  GAATTCCTTACTTCTCTCTTGGCTGGGCAGCTCAGAAATAATGAGTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTACTTCTCTCTTGGCTGGGCAGCTCAGAAATAATGAGTTCCC  50

seq1  TGTACATTTTGTTTCCAAGGAGATAGAACCAAAAATTCATTCGAGGCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATTTTGTTTCCAAGGAGATAGAACCAAAAATTCATTCGAGGCCTT  100

seq1  TCTAGACCCTGGCAGGAACCGTGTACAATGTGTGACTCTTTGAAGTGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACCCTGGCAGGAACCGTGTACAATGTGTGACTCTTTGAAGTGGTA  150

seq1  TCAAGACAGATAAATCAGCATAAGTCTGCGTGTCTGTTGTCCTGCCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACAGATAAATCAGCATAAGTCTGCGTGTCTGTTGTCCTGCCAGCT  200

seq1  TCCTGAGCCCAGTAAAGGGATTTGGGCCAAGCAGAAGGTGGCCATGGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGCCCAGTAAAGGGATTTGGGCCAAGCAGAAGGTGGCCATGGTGC  250

seq1  TCCTATATGCACAACAAATACTGCACATCCTCTTAATTCCAGCCCTATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATATGCACAACAAATACTGCACATCCTCTTAATTCCAGCCCTATAA  300

seq1  TCTTGTTCCCAACCATAAGAAACCTTCCTAGCCCCTCAAATCCTCCAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTCCCAACCATAAGAAACCTTCCTAGCCCCTCAAATCCTCCAACA  350

seq1  GTTAATTCACAGTGATAGAATGGCGATTCCAGGTATCACACGGTTATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTCACAGTGATAGAATGGCGATTCCAGGTATCACACGGTTATAGT  400

seq1  GAAGTGCTTCTGCTAAGGACACTAAAATCATCCCAATGACAGTATAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCTTCTGCTAAGGACACTAAAATCATCCCAATGACAGTATAACTG  450

seq1  CAGAGAGTTAAAAACAATACCAAAAAAAGTGAAGCAGAGTAATCAAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTTAAAAACAATACCAAAAAAAGTGAAGCAGAGTAATCAAAGCT  500

seq1  TTTACTAAGAAACCATTGCAGAACTCTTTGCTTTCAGAACCTAACCGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAAGAAACCATTGCAGAACTCTTTGCTTTCAGAACCTAACCGTGC  550

seq1  TCCATACAAAACTTGATTTGGTTATATAAATAATATGTTTTGGTCTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACAAAACTTGATTTGGTTATATAAATAATATGTTTTGGTCTCTGT  600

seq1  ATCCATATGTTCCATATTCAGGGATTCAACCAGGTACAGATGAAAAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATATGTTCCATATTCAGGGATTCAACCAGGTACAGATGAAAAGTAG  650

seq1  TCAGGAAAAAGAAACCTGGCTTTACTCAACACACAGTCTCTATGTGCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAAAAGAAACCTGGCTTTACTCAACACACAGTCTCTATGTGCTGT  700

seq1  TACTCCTTAAATAACACGGCATAGCAGCTATTTACATACTATTTGCATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTTAAATAACACGGCATAGCAGCTATTTACATACTATTTGCATAA  750

seq1  CTAGATATAACTGGAAGCACACTGAAGGATATGTGTGTTACATGTTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATATAACTGGAAGCACACTGAAGGATATGTGTGTTACATGTTTCAT  800

seq1  GTTACATGTTGATTCTGCACCATTTGACACAGAGGCTAAGACATTTTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATGTTGATTCTGCACCATTTGACACAGAGGCTAAGACATTTTCTG  850

seq1  CCTTCAACACCCAAAGGGGTCCAGAAACTGTCTTCCCAGACGTACC-AAG  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCTTCAACACCCAAAGGGGTCCAGAAACTGTCTTCCCAGACGTACCAAAG  900

seq1  GGGTAAGTGTTCCATTTGGGGACGGACATAAAATTTGTTTATATTTTCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAGTGTTCCATTTGGGGACGGACATAAAATTTGTTTATATTTTCAT  950

seq1  AATTCAT-GGACTCCTGCCGTGCAGAGAGCTGCC-TTTGCTCTGCTATGT  997
      ||||||| |||||||||||||||||||||||||| |||||||||||||||
seq2  AATTCATGGGACTCCTGCCGTGCAGAGAGCTGCCTTTTGCTCTGCTATGT  1000

seq1  TAAAAACAAAAAAGACAGCCGGGCGTGGTGGCGCACACCTTTAAGCCCAG  1047
      | |||||||||||||||||||||||| |||||||||||||||||||||||
seq2  T-AAAACAAAAAAGACAGCCGGGCGT-GTGGCGCACACCTTTAAGCCCAG  1048

seq1  CACTCGGGAGGCAGAAGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGGT  1097
      ||||||||||||||||||| ||||||||||||| |||| | ||||  | |
seq2  CACTCGGGAGGCAGAAGCA-GCAGATTTCTGAG-TCAA-GTCAGCTGGAT  1095

seq1  CTACAAAG-TGAGTTCCAGGACAGCCAGGGCTATACAGAGAAA-CCCTG-  1144
      |||||||| |||||||  | ||||||| |||||||| |||||| ||||| 
seq2  CTACAAAGTTGAGTTCAGGAACAGCCA-GGCTATACCGAGAAATCCCTGT  1144

seq1  TCTCGAAA  1152
      ||||||||
seq2  TCTCGAAA  1152


seq1: chr4_86203645_86204547
seq2: B6Ng01-283C16.g_66_969 (reverse)

seq1  ACACAC-ACACACACACACACACACTACCTGATCAGCGCTGATTCGACAT  49
      |||||| | |||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAAAACACACACACACACACTACCTGATCAGCGCTGATTCGACAT  50

seq1  GTGTGCATCAAATATTAGTCAACAATGTTGCAGTTTAAAACCCGAATCCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATCAAATATTAGTCAACAATGTTGCAGTTTAAAACCCGAATCCA  100

seq1  GTGCGATGCTGCCTAGCGAAGCAGCGGGATGAAGAAGACACATCCTGTCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGATGCTGCCTAGCGAAGCAGCGGGATGAAGAAGACACATCCTGTCT  150

seq1  TCGTTCCAGGAAAGGGGCTTGGCACCCTAGGGAGTGTGAAAATCAGGCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCCAGGAAAGGGGCTTGGCACCCTAGGGAGTGTGAAAATCAGGCTC  200

seq1  CCCTCCCCAGATTGCCCTTGGGAGGACTACCTTACCCGCAGGAGCACAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCAGATTGCCCTTGGGAGGACTACCTTACCCGCAGGAGCACAGG  250

seq1  TTGCAGATGCAAGTCCTCTTCCCCATCCTTCACCTCGGACTTTCCACTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGATGCAAGTCCTCTTCCCCATCCTTCACCTCGGACTTTCCACTAA  300

seq1  GGCAATCGCCTAGAGGATCCCAGCTGCCTGGGACAACGATCACACTTCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATCGCCTAGAGGATCCCAGCTGCCTGGGACAACGATCACACTTCTT  350

seq1  CGGTGCCTTGACCGATGCTGTTTTGCTCAGAAGGAAACTTAGGTGGCCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGCCTTGACCGATGCTGTTTTGCTCAGAAGGAAACTTAGGTGGCCCT  400

seq1  TTTGCAAAATTCTGTAGTCTATTCCTTTCCTGAGGCTGGCCTTGGGCAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAAATTCTGTAGTCTATTCCTTTCCTGAGGCTGGCCTTGGGCAAA  450

seq1  CAGGCAGCACTTAGCACAGACAGCAAGCCAGGCCGGCTCACGTCTGTAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGCACTTAGCACAGACAGCAAGCCAGGCCGGCTCACGTCTGTAAG  500

seq1  CTGCTGCCACTGCGGCCAGTGGGAAGCACCCACCTGCCAGCACAGCCTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCACTGCGGCCAGTGGGAAGCACCCACCTGCCAGCACAGCCTGG  550

seq1  CCCCTGCAAGCCACAGGGCCCAGGACTGAGTCCTCTATGACCTTCAAAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCAAGCCACAGGGCCCAGGACTGAGTCCTCTATGACCTTCAAAGT  600

seq1  CACAGAGGAGGGCATCTTGAGGTGGCAATGACATCATAAGGGCCTCCTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGGAGGGCATCTTGAGGTGGCAATGACATCATAAGGGCCTCCTGT  650

seq1  GAGGTCAGACTTCACCTAGTATCTCACCTGGCAGACCCAAGACAGGGACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGACTTCACCTAGTATCTCACCTGGCAGACCCAAGACAGGGACT  700

seq1  CTCCCACTGGAACTTGGAAGGAAGATGGAAGATACCTTGGAGGGCTTTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACTGGAACTTGGAAGGAAGATGGAAGATACCTTGGAGGGCTTTAG  750

seq1  GAAGCCTCCGAGTCCCAGAGTTAACCAACAGCACGGTCACATAATGCAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTCCGAGTCCCAGAGTTAACCAACAGCACGGTCACATAATGCAAA  800

seq1  GACAATGAAAAGTATCTTGTCGGGTGGCACTTTCCATCCCTAGGACACAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGAAAAGTATCTTGTCGGGTGGCACTTTCCATCCCTAGGACACAT  850

seq1  TGTCCGTCTGGAGGAAATGCATGCCCGGACCTCCAGAATATTGACCCTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCGTCTGGAGGAAATGCATGCCCGGACCTCCAGAATATTGACCCTGA  900

seq1  ATTC  903
      ||||
seq2  ATTC  904


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