BAC Information

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BAC

Clone NameB6Ng01-283D14
Chromosome4 (Build37)
Map Location 86,369,313 - 86,551,104
singlet/doubletdoublet
Overlap geneEG624685, Dennd4c, Rps6, Asah3l
Upstream geneA930009N24, LOC668052, Adamtsl1, 4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp
Downstream geneSlc24a2, Mllt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283D14.bB6Ng01-283D14.g
ACCGA082239GA082240
length1,128695
definitionB6Ng01-283D14.b B6Ng01-283D14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,549,980 - 86,551,104)(86,369,313 - 86,370,005)
sequence
gaattccaatactccctgaactgcgccctctaacggccatctgttcatat
tgcatcctccctgtaagccccgaggttctccttcacagcaccatcacaag
ctaaaacagtatattatttgtgcagttatttgtctcatgtctgaaggtca
atggaactaggagccatacctgtttattcaccaatggatgcccactacct
agcaacaatccctcacccaaagcagggtttcagtgacgtttgctgatgga
tcaataaactaataaagaacaggcacaatttcagctgggcgccagaggct
taggtagaactatattatgtttatttaatgttgtttggttttgctgctgt
tgaaacatgcagtccaagctggcttcaaaacctctatgtagccccccatt
cttacctctgaagtacgcccaggtaatcccaaggattaaagactaggatt
acagactagctaaagccagactaggctatataataaagtgtgatcaaagg
acaggaaagggaagaaactggaggggaggaaggataagaaagggaatcta
aagaaagggaaactaagccaagtgtggtgatgtcagcacgcctttgatcc
cagcccttaggagacagaggcaggtgtacctctgagctcaagtccaccct
ggtctacaaagccagttccaggacagccaagactacataggtagaccttg
tctcttacaaacggaaacaaaaatgtaacttaaaaatgttttttctacac
atcattactttataaaaagtttccatgaacacccaacctaattacattta
gaaacgttggcttaaggatcacaggaaaacggagcaacatggcagagatg
tagtgaaagtaaagtgccagtcggggtcactggaggttggcagagtagag
ggaagtcagtgggagagccagagcccagagtggtgccttctgcatctccc
tctattccggaggatgcaggtcctgctacagctgctgatcaggatgccca
ggtcaactcaggactgccccaaacctgacttcaccaggttctagtctcat
tgtcatggatttcatcagagcatcaaagtgaaggttcaagtttcaggaga
aactagcaatgccaaaccgatatatgca
gaattcatagactatgttgctctgaatggtcttgaattcttggtaataaa
cctgcctctgcatccccaacactgggattcaggcgggaactactacactc
atgtacctacttgattctttttctttctttttttttttttttttttttgg
tttttttgagacagggtttctctgtatagccctggctgtcctggagctca
ctttgtagtcctggaactcactttgtagaccaggctggccttgaactcag
aaatccgcctgcctctgcctcctgagtgctgggattaaaggcgtgtgcca
ccacacccggcgattcttattgtatacctaaagccagtgccactgtgtgg
ttgccatgggccctacgctcagagaggaagggaaactttgacccagttcc
tgttcttgaaaactttgtgagttgatgcaggacactaacatttaacagta
cagagcggtttctaagtgttgtgatgtctccatcataaacaagtgaacca
aaagccacaaaagaatgaattatagaatgaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaagaaaggaaggaaagaaatagtcggagag
atggctcaaaggacctgggttcacgtcccagcacccacatgacagctcac
agcctgtctgttactctggctccagagtaatctgccacccttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_86549980_86551104
seq2: B6Ng01-283D14.b_46_1173 (reverse)

seq1  TGCATATATTCGTTTTGCATTGCTTGTTTCCTTCTGAAACTTGA--CCTC  48
      |||||||||  |||| |||||||| |||| || |||||||||||  | ||
seq2  TGCATATATCGGTTTGGCATTGCTAGTTT-CTCCTGAAACTTGAACCTTC  49

seq1  ACTTTGATGCTCTGATGAAATCCATGACAATGAGACTAGAACCTGGTGGA  98
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACTTTGATGCTCTGATGAAATCCATGACAATGAGACTAGAACCTGGTGAA  99

seq1  GTCAGGTTTGGGGCAGTCCTGAGTTGACCTGGGCATCCTGATCAGCAGCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTTTGGGGCAGTCCTGAGTTGACCTGGGCATCCTGATCAGCAGCT  149

seq1  GTAGCAGGACCTGCATCCTCCGGAATAGAGGGAGATGCAG-AGGCACCAC  197
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTAGCAGGACCTGCATCCTCCGGAATAGAGGGAGATGCAGAAGGCACCAC  199

seq1  TCTGGGCTCTGGCTCT-CCACTGACTTCCCTCTACTCTGCCAACCTCCAG  246
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTGGGCTCTGGCTCTCCCACTGACTTCCCTCTACTCTGCCAACCTCCAG  249

seq1  TGACCCCGACTGGCACTTTACTTTCACTACATCTCTGCCATGTTGCTCCG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCCGACTGGCACTTTACTTTCACTACATCTCTGCCATGTTGCTCCG  299

seq1  TTTTCCTGTGATCCTTAAGCCAACGTTTCTAAATGTAATTAGGTTGGGTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGTGATCCTTAAGCCAACGTTTCTAAATGTAATTAGGTTGGGTG  349

seq1  TTCATGGAAACTTTTTATAAAGTAATGATGTGTAGAAAAAACATTTTTAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGAAACTTTTTATAAAGTAATGATGTGTAGAAAAAACATTTTTAA  399

seq1  GTTACATTTTTGTTTCCGTTTGTAAGAGACAAGGTCTACCTATGTAGTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATTTTTGTTTCCGTTTGTAAGAGACAAGGTCTACCTATGTAGTCT  449

seq1  TGGCTGTCCTGGAACTGGCTTTGTAGACCAGGGTGGACTTGAGCTCAGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCCTGGAACTGGCTTTGTAGACCAGGGTGGACTTGAGCTCAGAG  499

seq1  GTACACCTGCCTCTGTCTCCTAAGGGCTGGGATCAAAGGCGTGCTGACAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACCTGCCTCTGTCTCCTAAGGGCTGGGATCAAAGGCGTGCTGACAT  549

seq1  CACCACACTTGGCTTAGTTTCCCTTTCTTTAGATTCCCTTTCTTATCCTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACTTGGCTTAGTTTCCCTTTCTTTAGATTCCCTTTCTTATCCTT  599

seq1  CCTCCCCTCCAGTTTCTTCCCTTTCCTGTCCTTTGATCACACTTTATTAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTCCAGTTTCTTCCCTTTCCTGTCCTTTGATCACACTTTATTAT  649

seq1  ATAGCCTAGTCTGGCTTTAGCTAGTCTGTAATCCTAGTCTTTAATCCTTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTAGTCTGGCTTTAGCTAGTCTGTAATCCTAGTCTTTAATCCTTG  699

seq1  GGATTACCTGGGCGTACTTCAGAGGTAAGAATGGGGGGCTACATAGAGGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTACCTGGGCGTACTTCAGAGGTAAGAATGGGGGGCTACATAGAGGT  749

seq1  TTTGAAGCCAGCTTGGACTGCATGTTTCAACAGCAGCAAAACCAAACAAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGCCAGCTTGGACTGCATGTTTCAACAGCAGCAAAACCAAACAAC  799

seq1  ATTAAATAAACATAATATAGTTCTACCTAAGCCTCTGGCGCCCAGCTGAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATAAACATAATATAGTTCTACCTAAGCCTCTGGCGCCCAGCTGAA  849

seq1  ATTGTGCCTGTTCTTTATTAGTTTATTGATCCATCAGCAAACGTCACTGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGCCTGTTCTTTATTAGTTTATTGATCCATCAGCAAACGTCACTGA  899

seq1  AACCCTGCTTTGGGTGAGGGATTGTTGCTAGGTAGTGGGCATCCATTGGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCTTTGGGTGAGGGATTGTTGCTAGGTAGTGGGCATCCATTGGT  949

seq1  GAATAAACAGGTATGGCTCCTAGTTCCATTGACCTTCAGACATGAGACAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAACAGGTATGGCTCCTAGTTCCATTGACCTTCAGACATGAGACAA  999

seq1  ATAACTGCACAAATAATATACTGTTTTAGCTTGTGATGGTGCTGTGAAGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGCACAAATAATATACTGTTTTAGCTTGTGATGGTGCTGTGAAGG  1049

seq1  AGAACCTCGGGGCTTACAGGGAGGATGCAATATGAACAGATGGCCGTTAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTCGGGGCTTACAGGGAGGATGCAATATGAACAGATGGCCGTTAG  1099

seq1  AGGGCGCAGTTCAGGGAGTATTGGAATTC  1125
      |||||||||||||||||||||||||||||
seq2  AGGGCGCAGTTCAGGGAGTATTGGAATTC  1128

seq1: chr4_86369313_86370005
seq2: B6Ng01-283D14.g_61_755

seq1  GAATTCATAGACTATGTTGCTCTGAATGGTCTTGAATTCTTGGTAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGACTATGTTGCTCTGAATGGTCTTGAATTCTTGGTAATAAA  50

seq1  CCTGCCTCTGCATCCCCAACACTGGGATTCAGGCGGGAACTACTACACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCTGCATCCCCAACACTGGGATTCAGGCGGGAACTACTACACTC  100

seq1  ATGTACCTACTTGATTCTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCTACTTGATTCTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTGG  150

seq1  TTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAGCTCA  200

seq1  CTTTGTAGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAG  250

seq1  AAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGTGTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGTGTGCCA  300

seq1  CCACACCCGGCGATTCTTATTGTATACCTAAAGCCAGTGCCACTGTGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCCGGCGATTCTTATTGTATACCTAAAGCCAGTGCCACTGTGTGG  350

seq1  TTGCCATGGGCCATACGCTCAGAGAGGAAGGGAAACTTTGACCCAGTTCC  400
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTGCCATGGGCCCTACGCTCAGAGAGGAAGGGAAACTTTGACCCAGTTCC  400

seq1  TGTTCTTGAGAACTTTGTGAGTTGATGCAGGACACTAACATTTAACAGTA  450
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGAAAACTTTGTGAGTTGATGCAGGACACTAACATTTAACAGTA  450

seq1  CAGAGCGGTTTCTAAGTGTTGTGATGTCTCCATCATAAACAAGTGAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCGGTTTCTAAGTGTTGTGATGTCTCCATCATAAACAAGTGAACCA  500

seq1  AAAGCCACAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  550
      ||||||||||||||| |||  | |||| ||||||||||||||||||||||
seq2  AAAGCCACAAAAGAATGAATTATAGAATGAAAGAAAGAAAGAAAGAAAGA  550

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAAGAAAGAGTCGGAGAG  600
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAAGAAATAGTCGGAGAG  600

seq1  ATGGCTCAGAGGACCTGGGTTCAGGTCCCAGCACCCACATGACAGCTCAC  650
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  ATGGCTCAAAGGACCTGGGTTCACGTCCCAGCACCCACATGACAGCTCAC  650

seq1  AG-CTGTCTGTAACTCTGGCTCCAGAGT-ATCTGCCACCCTTACA  693
      || |||||||| |||||||||||||||| ||||||||||||||||
seq2  AGCCTGTCTGTTACTCTGGCTCCAGAGTAATCTGCCACCCTTACA  695