BAC Information

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BAC

Clone NameB6Ng01-284L02
Chromosome4 (Build37)
Map Location 146,586,846 - 146,587,981
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546
Downstream geneLOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284L02.bB6Ng01-284L02.g
ACCGA083331GA083332
length1,1481,187
definitionB6Ng01-284L02.b B6Ng01-284L02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtgtacaaatacagatacttccaaggatctaagaggttattt
tagaaaaatattctggggctggagagatggctcaatggttaagagcactg
attgctcttccgaaggtcctgagttcaaatcccagcaaccacatgatggc
tcacaaccatctgtaatgagatctgacgccctcttctggtgtatctaaaa
gacaactacagtgtacttagatataataataaataaatcttttaaaaaat
agaaaaatattctggaacttataaaattaattaaaacatcaccaaaaccc
ccaggttcatagtatctcaaacttctccaaaatggtaagatatccatgac
agaattgtgagagtggcaggagaaaataaacccctgcccacaccttgttc
ttctcctgcccatttcccagcccaacagctgctctgaccttgaagttgaa
agtactagctgctgaatattctgtaaggcacagcaactgcagcttaagga
ggtaccacaaatactctgactactctcccactatcacttcctgaccatga
tgcagccgagatacattgtcttttatatatgaaggacaggcccccttcaa
tttagaaattgcctttcctctaatggacatgttcaagttcattctatgct
ttttggtaatatacatgaaggtaaggattagtttaatttcttaacaaaag
cttgttgattttcctatgaaagtaacttagcaagatcttacattacaaat
caccattgcactcagaaaactggtcctgcattcctgcaaagctgttagct
cagcttgggtatttaacccctgttttaatccctgagatttaaaacagaca
aatgttacacatgtcctgtcttttcgaaagtttgcctttatgcctgtatg
tatgtatgcttaattctcattgttatttatgcccttggcctaacctgggg
aaagtttcaaaaaataatgaatacaagtatttgttcattagtttataatt
gcccaaggcttcaaaaatcagaaaaataccaattgttaaacttaaaaccg
catattaaattcatgtttgactcttagtttcctcatagtccactgacatt
actataataaccacagggacatgcctatttgtagaattgagctatcaa
gaattcatacaggagagaaaccttacaaatgcagtgagtgtgacaaatgc
tttacccaaccatcccatcttagtattcatcgtagaattcattcaggaga
gaaaccttacaaatgtagtgaatgcgacaaatgctttactgacaaaggca
gtctgagagttcatcagagaattcatataggagagaaaccgtacaaatgc
agtgagtgtgacaaatgctttacccaaccatcccatcttagtattcatcg
tagaattcattcaggagagaaaccttacaaatgtagtgaatgcgacaaat
gctttactgacaaaggcagtctgagagttcatcagagaattcatacagga
gagaaaccgtaccaatgcagtgagtgtgacaaatgctttactgacaaaag
cagtcttagagttcatcatagaattcatgcaggagagaaaccttacaaat
gtagtgaatgcgacaaatgctttactgacaaaggctatctgagagttcat
catagaattcatgcaggagagaaatcttacaaatgtagtgaatgtgacaa
atgctttactcacaaaggctctctgagagttcatcatagaattcatgcag
gagagaaaccttataaatgcagtgaatgtgacaaatgctttaccggaaaa
tcacatcttagtattcatcagagaattcatacaggagagaaactgtacaa
atgcagtgaatgtgacaaatgctttacccaacaatgccatcttagtattc
atcagaaaattcattcagaagagaaccttacaaatgcaatgaatgcgaca
aatgctttactgacaaacacagtctgagaaggcatcagataattcataca
ggagagaaaccttacaaatgtaatgaatgtgacaaatcctttactgaaaa
tggctgtctgagaattcatcagagaattcatacaggagagaaacccttac
aaatgtagtgaatgtgacaaatgctttactaaaaaatccaggttgagatt
catcagagatttcatacaggagagaaacccttacaatgtagtgaatgtga
caaaatgtttttattcaaaaatgcagtatgataattcatcagagaatcat
aagagaagaaatcttacaaatgtaatgaatgtgacagcttactgagaaag
gtcagaaatggcactctgagaaactctcatactaccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146586846_146587981
seq2: B6Ng01-284L02.b_48_1195 (reverse)

seq1  TTGATGAGCTC-ATTCTAC-AATA-GCCTGTCCCTGTG--TATTATAGGT  45
      ||||| ||||| ||||||| |||| || ||||||||||  ||||||| ||
seq2  TTGAT-AGCTCAATTCTACAAATAGGCATGTCCCTGTGGTTATTATA-GT  48

seq1  AATGTCAGTGGACTATGA-GAAACTAAGAGTCAAACATGAATTTTAATAT  94
      |||||||||||||||||| |||||||||||||||||||||| ||||||||
seq2  AATGTCAGTGGACTATGAGGAAACTAAGAGTCAAACATGAA-TTTAATAT  97

seq1  GC-GTTTTAAGTTTAAACAATGGTA-TTTTCTGA-TTTTGAGGCCTTGG-  140
      || |||||||||||||  | ||||| |||||||| |||||| ||||||| 
seq2  GCGGTTTTAAGTTTAACAATTGGTATTTTTCTGATTTTTGAAGCCTTGGG  147

seq1  -CATTATAAACTAATGAAACAAATAC-TGTA-TCAT--ATTTTTGAAAGT  185
        |||||||||||||| ||||||||| |||| ||||   ||||||||| |
seq2  CAATTATAAACTAATG-AACAAATACTTGTATTCATTATTTTTTGAAACT  196

seq1  TTCCCCAGGTTAGGCCAA-GGCATAAATAACAATGAGAATTAAGCATACA  234
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTCCCCAGGTTAGGCCAAGGGCATAAATAACAATGAGAATTAAGCATACA  246

seq1  TACATACAGGCATAAAGGCAAACTTTCGAAAAGACAGGACATATGTAACA  284
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TACATACAGGCATAAAGGCAAACTTTCGAAAAGACAGGACATGTGTAACA  296

seq1  TTTGTCTGTTTTAAATCTCAGGGATTAAAACAGGGGTTAAATACCCAAGC  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGTTTTAAATCTCAGGGATTAAAACAGGGGTTAAATACCCAAGC  346

seq1  TGAGCTAACAGCTTTGCAGGAATGCAGGACCAGTTTTCTGAGTGCAATGG  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTAACAGCTTTGCAGGAATGCAGGACCAGTTTTCTGAGTGCAATGG  396

seq1  TGATTTGTAATGTAAGATCTTGCTAAGTTACTTTCATAGGAAAATCAACA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTAATGTAAGATCTTGCTAAGTTACTTTCATAGGAAAATCAACA  446

seq1  AGCTTTTGTTAAGAAATTAAACTAATCCTTACCTTCATGTATATTACCAA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTGTTAAGAAATTAAACTAATCCTTACCTTCATGTATATTACCAA  496

seq1  AAAGCATAGAATGAACTTGAACATGTCCATTAGAGGAAAGGCAATTTCTA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATAGAATGAACTTGAACATGTCCATTAGAGGAAAGGCAATTTCTA  546

seq1  AATTGAAGGGGGCCTGTCCTTCATATATAAAAGACAATGTATCTCGGCTG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAGGGGGCCTGTCCTTCATATATAAAAGACAATGTATCTCGGCTG  596

seq1  CATCATGGTCAGGAAGTGATAGTGGGAGAGTAGTCAGAGTATTTGTGGTA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGGTCAGGAAGTGATAGTGGGAGAGTAGTCAGAGTATTTGTGGTA  646

seq1  CCTCCTTAAGCTGCAGTTGCTGTGCCTTACAGAATATTCAGCAGCTAGTA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTAAGCTGCAGTTGCTGTGCCTTACAGAATATTCAGCAGCTAGTA  696

seq1  CTTTCAACTTCAAGGTCAGAGCAGCTGTTGGGCTGGGAAATGGGCAGGAG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAACTTCAAGGTCAGAGCAGCTGTTGGGCTGGGAAATGGGCAGGAG  746

seq1  AAGAACAAGGTGTGGGCAGGGGTTTATTTTCTCCTGCCACTCTCACAATT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAAGGTGTGGGCAGGGGTTTATTTTCTCCTGCCACTCTCACAATT  796

seq1  CTGTCATGGATATCTTACCATTTTGGAGAAGTTTGAGATACTATGAACCT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATGGATATCTTACCATTTTGGAGAAGTTTGAGATACTATGAACCT  846

seq1  GGGGGTTTTGGTGATGTTTTAATTAATTTTATAAGTTCCAGAATATTTTT  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTTTTGGTGATGTTTTAATTAATTTTATAAGTTCCAGAATATTTTT  896

seq1  CTATTTTTTAAAAGATTTATTTATTATTATATCTAAGTACACTGTAGTTG  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTTAAAAGATTTATTTATTATTATATCTAAGTACACTGTAGTTG  946

seq1  TCTTTTAGATACACCAGAAGAGGGCATCAGATCTCATTACAGATGGTTGT  984
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTTTTAGATACACCAGAAGAGGGCGTCAGATCTCATTACAGATGGTTGT  996

seq1  GAGCCATCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCA  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCA  1046

seq1  ATCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCAAGAATATTTTTC  1084
      ||||||||||||||||| ||||||||||||||||||| ||||||||||||
seq2  ATCAGTGCTCTTAACCATTGAGCCATCTCTCCAGCCCCAGAATATTTTTC  1096

seq1  TAAAATAACCTCTTAGATCCTTGGAAGTATCTGTATTTGTACACAGGAAT  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAACCTCTTAGATCCTTGGAAGTATCTGTATTTGTACACAGGAAT  1146

seq1  TC  1136
      ||
seq2  TC  1148