BAC Information

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BAC

Clone NameB6Ng01-292H17
Chromosome4 (Build37)
Map Location 110,253,688 - 110,254,791
singlet/doubletsinglet
Overlap genenone
Upstream geneCdkn2c, LOC100040307, Faf1, Dmrta2, Elavl4
Downstream geneLOC100040381, 2310026E23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292H17.bB6Ng01-292H17.g
ACCGA089109GA089110
length1,2171,099
definitionB6Ng01-292H17.b B6Ng01-292H17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccaaggtggtacggtctctggatggctcttccttcagtctctcc
tccattatttttgtctatgcatttcctttagacaggaacaattctgggtt
aaaaagtttgacatgggtggtggccccctctctcaactatgggccatgtc
tatctattggagatagtctcttcaagttctatttcacctctgttgggcat
ttcagttaatgtcatgcccactgggtcctgggagcctcccacatccttgg
tgtctgtgactatctagtggttgccccattctgaaccccatactgctcta
tattactattcattctcctgaccctctgggcttctctcctgtacccccat
gtctgatcatgcctcctcccttttccttcccgtgcccctctccccaacag
gtccctccctccctctgcctcccatgattattttgttcctccttataagt
gggactgaagattccttcttgttcatatgatctgtgaattgtatcatggc
tattctgaacttttggctagtagccacttatcagtgagtacataccatgt
atgtattttggggtctgggttacctcactcaggatgatattttctagttc
catgcatttgcctgcaaattttgtgaagccatttttaattgctaagtagt
aatccattgtgtaaaagtaccatattttctgtatccattcttctgttgag
ggacatctgggttgttcctagcttctggctattataaaaaaggctgctac
aaatatagtggaccacatgaccttggaatatggtagagcatcttttgggt
atatgcccaggagtggtatagctgggtcttcagacagaactattttccaa
atttctgagtatctgcaagattgatttccaaagtaattgtaccttttttg
caaccccaccagcaatggaggagtgttctttttcctacacatccttgcca
acatgtgctgtcacctgaatttttgagctttgccattctgattggtatga
gtagaatctcaggtttgttttgaatttgcatttccctgatgactaagaat
cacaacgtttactattcatatcatacacaaaataggtgaataccttggac
ttcttcttcaacttgttatccttgaacctccttatttctaattactctgg
ctgaatccggtactggttagaaataatacggagaaagggaaatagccgtg
tatcctgtggtccctgg
gaattcaggtactcatgggctctttcttgacactatgctgttcctggcat
cttagccttgatgtgccaggaagcatttgtgaaccccaaaagaccaccaa
agagccgtttccagtgtaatcacattagggtctctttattacaagtttga
ggttgggctctcctccaacctaaccctgacacagcaggatgggaaagtgg
aacagcctgaaccctcagcaggataaggttttatagggaatgggagtaca
tgagggggtgtccagcctggtgagtatttagtagaatgactattgtaagc
tgacaggtgggtgtcttgaagcaagactgaacaatcacaaatggtctgaa
agtacatctgaaacaatcagacattaattaacaatcagacattgtttaac
tgttgctaggaagtagctagggagtaattcttgatatgggccaaggacaa
gcttggtacttggtacttgggtatcaagtacctgggttcagctgcaggtc
aagttctggtcaagttctcaggcctctttttttttttctttttaagttag
aggctagtcccaagatagaataggtttggcctctctgcctcagcagaaga
ggaaggacagtgcacttttcaactaattgtcacaattctctggagtacca
cagacacagcactgaggaacatgccatttttttttttaagttttagaggc
tacctggtgggaactggatatagaaaggtatctgtatattggtaaatatg
atacttcagagtttcagcctatggggaaggtgagaaaagagctgaagctc
acacacagacccctccacccttggcaactctaagtccttgccttgtttct
tgcttctaccgaattttacattaccaagtctattggccatttccatggta
ttatcatgcacattcttctttttgaccatgtacagtggctctcctgactc
caggtttattccacaaaataacccagtaatcttcaaaatacttttccaaa
gtcttctgtggctcctgcaagcatccactttctatcagagtgacatatat
cctcttctctggtgctgttgctatgcagcctgggtgagtagatttgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_110253688_110254791
seq2: B6Ng01-292H17.g_65_1163

seq1  GAATTCAGGTACTCATGGGCTCTTTCTTGACACTATGCTGTTCCTGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTACTCATGGGCTCTTTCTTGACACTATGCTGTTCCTGGCAT  50

seq1  CTTAGCCTTGATGTGCCAGGAAGCATTTGTGAACCCCAAAAGACCACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCTTGATGTGCCAGGAAGCATTTGTGAACCCCAAAAGACCACCAA  100

seq1  AGAGCCGTTTCCAGTGTAATCACATTAGGGTCTCTTTATTACAAGTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCGTTTCCAGTGTAATCACATTAGGGTCTCTTTATTACAAGTTTGA  150

seq1  GGTTGGGCTCTCCTCCAACCTAACCCTGACACAGCAGGATGGGAAAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGCTCTCCTCCAACCTAACCCTGACACAGCAGGATGGGAAAGTGG  200

seq1  AACAGCCTGAACCCTCAGCAGGATAAGGTTTTATAGGGAATGGGAGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCTGAACCCTCAGCAGGATAAGGTTTTATAGGGAATGGGAGTACA  250

seq1  TGAGGGGGTGTCCAGCCTGGTGAGTATTTAGTAGAATGACTATTGTAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGGTGTCCAGCCTGGTGAGTATTTAGTAGAATGACTATTGTAAGC  300

seq1  TGACAGGTGGGTGTCTTGAAGCAAGACTGAACAATCACAAATGGTCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGGTGGGTGTCTTGAAGCAAGACTGAACAATCACAAATGGTCTGAA  350

seq1  AGTACATCTGAAACAATCAGACATTAATTAACAATCAGACATTGTTTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATCTGAAACAATCAGACATTAATTAACAATCAGACATTGTTTAAC  400

seq1  TGTTGCTAGGAAGTAGCTAGGGAGTAATTCTTGATATGGGCCAAGGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTAGGAAGTAGCTAGGGAGTAATTCTTGATATGGGCCAAGGACAA  450

seq1  GCTTGGTACTTGGTACTTGGGTATCAAGTACCTGGGTTCAGCTGCAGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTACTTGGTACTTGGGTATCAAGTACCTGGGTTCAGCTGCAGGTC  500

seq1  AAGTTCTGGTCAAGTTCTCAGGCCTCTTTTTTTTTTTCTTTTTAAGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGGTCAAGTTCTCAGGCCTCTTTTTTTTTTTCTTTTTAAGTTAG  550

seq1  AGGCTAGTCCCAAGATAGAATAGGTTTGGCCTCTCTGCCTCAGCAGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGTCCCAAGATAGAATAGGTTTGGCCTCTCTGCCTCAGCAGAAGA  600

seq1  GGAAGGACAGTGCACTTTTCAACTAATTGTCACAATTCTCTGGAGTACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGACAGTGCACTTTTCAACTAATTGTCACAATTCTCTGGAGTACCA  650

seq1  CAGACACAGCACTGAGGAACATGCCATTTTTTTTTTTAAGTTTTAGAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACAGCACTGAGGAACATGCCATTTTTTTTTTTAAGTTTTAGAGGC  700

seq1  TACCTGGTGGGAACTGGATATAGAAAGGTATCTGTATATTGGTAAATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGTGGGAACTGGATATAGAAAGGTATCTGTATATTGGTAAATATG  750

seq1  ATACTTCAGAGTTTCAGCCTATGGGGAAGGTGAGAAAAGAGCTGAAGCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCAGAGTTTCAGCCTATGGGGAAGGTGAGAAAAGAGCTGAAGCTC  800

seq1  ACACACAGACCCCTCCACCCTTGGCAACTCTAAGTCCTTGCCTTGTTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAGACCCCTCCACCCTTGGCAACTCTAAGTCCTTGCCTTGTTTCT  850

seq1  TGCTTCTACCGAATTTTACATTACCAAGTCTATTGGCCATTTCCATGGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTACCGAATTTTACATTACCAAGTCTATTGGCCATTTCCATGGTA  900

seq1  TTATCATGCACATTCTTCTTTTTGACCATGTACAGTGGCTCTCCTGACTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATGCACATTCTTCTTTTTGACCATGTACAGTGGCTCTCCTGACTC  950

seq1  CAGGTTTATTCCACAAAATAA-CCAGTAATCTTCAAAATACTTTTCCAAA  999
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAGGTTTATTCCACAAAATAACCCAGTAATCTTCAAAATACTTTTCCAAA  1000

seq1  GTCTTCTGTTGGCTTCCTGCAAGCAT-CACTTTCTATCAGGAAGTGGACA  1048
      |||||||| |||| |||||||||||| |||||||||||||  ||| ||||
seq2  GTCTTCTG-TGGC-TCCTGCAAGCATCCACTTTCTATCAG--AGT-GACA  1045

seq1  TATATCCTCTTCTTCTGTTGCTGTTGCTAATGCAG-CTTGGTGAGTTAGA  1097
      |||||||||||| |||| |||||||||| |||||| || |||||| ||||
seq2  TATATCCTCTTC-TCTGGTGCTGTTGCT-ATGCAGCCTGGGTGAG-TAGA  1092

seq1  TTTGTCA  1104
      |||||||
seq2  TTTGTCA  1099