BAC Information

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BAC

Clone NameB6Ng01-295D19
Chromosome4 (Build37)
Map Location 83,527,128 - 83,528,206
singlet/doubletsinglet
Overlap genenone
Upstream geneCer1, Frem1, LOC667985, 1810054D07Rik, Snapc3, Psip1, LOC100040611, 4930473A06Rik
Downstream geneLOC668010, Bnc2, LOC100040660, LOC624465, LOC100040284
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295D19.bB6Ng01-295D19.g
ACCGA091156GA091157
length1,0231,074
definitionB6Ng01-295D19.b B6Ng01-295D19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccctgtactggggcatataaagtttgcaagaccaaggggcctct
cttcccaatgatggctgactaggccatcttctgctacatatgcacttaga
gacacaagctctgggggtactaattagttcatattgttgttccacctata
gggttgcagaccccttcagctcttggatactttttctttttttttttcca
ttttttattaggtatttagctcatttacatttccaatgctataccaaaag
gcccccgtagccacccaccccactcccatacccacccacttccccttttt
ggccctggcgttcccctgtactggggcatataaagtttgcatgtccaatg
ggcctctctttccagtgatggccgactaggccatcttttgatacatatgc
agctagagtcaagagctccggggtactggttagttcataatgttgttcca
cctatagggttgcagatccctttagctacttgggtactttctctagctcc
tccattggaagccctgtgatccatccattagctgactgtgagcatccact
tctgtgtttgctaggccccggaatagtctcacaagagacagctacatctg
ggtcctttcgataaaatcttgctagtgtatgcaatggtgtcagcgtttgg
atgctgattatggggtggatccctggatatggcagtctctacatggtcca
tcctttcatctcagctccaaactttgtctctgtaactccttccaagggtg
ttttgttcccacttctaaggaggggcatagtgtccacacttcagtcttca
tttttcttgagtttcatgtgtttagcaaattgtatcttatatcttgggta
tccctaggttttgggctaatatccacttatcagtgaatacatattgtgtg
aattcctttgtgaatgtgttacctcactcaggatgatgccctccaggtcc
atccatttggctaggaatttcataaattcattctttttaatagctgagta
gtacctccattgtgtagatgtac
gaattcagacctgtgaaagtctgaatggaaagtttataagtagaacagat
tttttttttagccttttttatatctaatcccaaacaatgagattctttct
atttaattgcaattctcaagactatgcgctgtatgggtgtgacggtcagc
ttcctatctctatggtgaagcaccttccataagaaaggaagaaaggctta
gcttagctgctgccttagaggtttcagtccacaatcatttaacccttttg
ttgctaatctcatggcaaccaggaataaaagtgggcaaaggaagagacac
agagggagaggagccattaacatacacatatgcttgcacatgcacacaca
cacacacacacacacacactttctagaaacacaatacttgtttgcattcc
tacctggaaccactaacacttgcacagagctgtcttcaccctagatccaa
ttcaaacaggccggaagctatacttgcatatgctactttttccgagagct
agaagtatgttctttctcattaaccatgtcagtcctcagagattcaaatt
gcctgtagtaccacacattgggctgagggcctacgatgtccgtgactttg
ccttcttcttgtcttgttgcgcacctcatatatactattccgaaaacaaa
tggccagttttatctgacatgaaaccatcctgtagtctagtcaaatgccc
acaactgcaagcccctggcttccactctgcgttgtattaaaacatttatt
tatgctgctatggtggttcagggtgagagactggtttctgaattgaattc
ttggtttccttgcttcaaattccctccttttcattcagttgaaggctaaa
gacacaatagtaattcccttttcaaaagtcagacatacaggtgcatatga
gtgcacacatgtacacatgctatagccctcctccctgacagacacaatgt
ccttgcttctctatctcagacatatgggttataaagttgctctctcttga
gagctctgcaagtgcctgacaataacagaagtgatgctcacagccatcat
ggacagagcacggggttccccaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_83527128_83528206
seq2: B6Ng01-295D19.g_69_1142 (reverse)

seq1  ATTGGGG-ACCCCGTGCTCTGTCCAATGGATGGCTGTGAGCATCCACTTC  49
      ||||||| |||||||||||||||||   ||||||||||||||| ||||||
seq2  ATTGGGGAACCCCGTGCTCTGTCCA--TGATGGCTGTGAGCAT-CACTTC  47

seq1  TGTATTTGTCAGGCACTTGCAGAGCCTCTCAAGAGAGAACCACCTTTAAT  99
      |||  ||||||||||||||||||| |||||||||||| | || |||||  
seq2  TGTTATTGTCAGGCACTTGCAGAG-CTCTCAAGAGAG-AGCAACTTTATA  95

seq1  AACCATATTGTCTGAGATAGAGAAGCAAGGACATTTGTGTCTGTCAGGGA  149
      | ||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  ACCCATA-TGTCTGAGATAGAGAAGCAAGGACA-TTGTGTCTGTCAGGGA  143

seq1  GGAGGGCTATAGCATGTGTACATGTGTGCACTCATATGCACCTGTATGTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCTATAGCATGTGTACATGTGTGCACTCATATGCACCTGTATGTC  193

seq1  TGACTTTTGAAAA-GGAATTACTATTGTGTCTTTAGCCTTCAACTGAATG  248
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGACTTTTGAAAAGGGAATTACTATTGTGTCTTTAGCCTTCAACTGAATG  243

seq1  AAAAGGAGGGAATTTGAAGCAAGGAAACCAAGAATTCAATTCAGAAACCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGGGAATTTGAAGCAAGGAAACCAAGAATTCAATTCAGAAACCA  293

seq1  GTCTCTCACCCTGAACCACCATAGCAGCATAAATAAATGTTTTAATACAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCACCCTGAACCACCATAGCAGCATAAATAAATGTTTTAATACAA  343

seq1  CGCAGAGTGGAAGCCAGGGGCTTGCAGTTGTGGGCATTTGACTAGACTAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGAGTGGAAGCCAGGGGCTTGCAGTTGTGGGCATTTGACTAGACTAC  393

seq1  AGGATGGTTTCATGTCAGATAAAACTGGCCATTTGTTTTCGGAATAGTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGTTTCATGTCAGATAAAACTGGCCATTTGTTTTCGGAATAGTAT  443

seq1  ATATGAGGTGCGCAACAAGACAAGAAGAAGGCAAAGTCACGGACATCGTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGGTGCGCAACAAGACAAGAAGAAGGCAAAGTCACGGACATCGTA  493

seq1  GGCCCTCAGCCCAATGTGTGGTACTACAGGCAATTTGAATCTCTGAGGAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTCAGCCCAATGTGTGGTACTACAGGCAATTTGAATCTCTGAGGAC  543

seq1  TGACATGGTTAATGAGAAAGAACATACTTCTAGCTCTCGGAAAAAGTAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGGTTAATGAGAAAGAACATACTTCTAGCTCTCGGAAAAAGTAGC  593

seq1  ATATGCAAGTATAGCTTCCGGCCTGTTTGAATTGGATCTAGGGTGAAGAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAAGTATAGCTTCCGGCCTGTTTGAATTGGATCTAGGGTGAAGAC  643

seq1  AGCTCTGTGCAAGTGTTAGTGGTTCCAGGTAGGAATGCAAACAAGTATTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTGCAAGTGTTAGTGGTTCCAGGTAGGAATGCAAACAAGTATTG  693

seq1  TGTTTCTAGAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGCAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTAGAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGCAAGC  743

seq1  ATATGTGTATGTTAATGGCTCCTCTCCCTCTGTGTCTCTTCCTTTGCCCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTATGTTAATGGCTCCTCTCCCTCTGTGTCTCTTCCTTTGCCCA  793

seq1  CTTTTATTCCTGGTTGCCATGAGATTAGCAACAAAAGGGTTAAATGATTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTCCTGGTTGCCATGAGATTAGCAACAAAAGGGTTAAATGATTG  843

seq1  TGGACTGAAACCTCTAAGGCAGCAGCTAAGCTAAGCCTTTCTTCCTTTCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGAAACCTCTAAGGCAGCAGCTAAGCTAAGCCTTTCTTCCTTTCT  893

seq1  TATGGAAGGTGCTTCACCATAGAGATAGGAAGCTGACCGTCACACCCATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGGTGCTTCACCATAGAGATAGGAAGCTGACCGTCACACCCATA  943

seq1  CAGCGCATAGTCTTGAGAATTGCAATTAAATAGAAAGAATCTCATTGTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCATAGTCTTGAGAATTGCAATTAAATAGAAAGAATCTCATTGTTT  993

seq1  GGGATTAGATATAAAAAAGGCTAAAAAAAAAATCTGTTCTACTTATAAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTAGATATAAAAAAGGCTAAAAAAAAAATCTGTTCTACTTATAAAC  1043

seq1  TTTCCATTCAGACTTTCACAGGTCTGAATTC  1079
      |||||||||||||||||||||||||||||||
seq2  TTTCCATTCAGACTTTCACAGGTCTGAATTC  1074