BAC Information

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BAC

Clone NameB6Ng01-296B12
Chromosome4 (Build37)
Map Location 6,405,251 - 6,405,981
singlet/doubletsinglet
Overlap genenone
Upstream gene1700012H17Rik, LOC669309, 3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf
Downstream geneLOC100039397, LOC100039414, Tox, LOC100039421, LOC666700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296B12.bB6Ng01-296B12.g
ACCGA091790GA091791
length9881,191
definitionB6Ng01-296B12.b B6Ng01-296B12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataatgttttgaagtgtgatagacattatacaaaatgagagaa
gtctgaaggcccatcccccaccacgccaggttcttgatgctttgtcacca
ggctgtcagcacttggtctccaggggtgttgcttattcacgaatgtctca
gaatgttcagcctctcagcgggtagcagcatctttactatggaaaactat
ggaaaaagaataaggtcagaaagtggactggagtctgcactcagagcaca
ctatatgccacagcactccgtacccaaataccgccaggagagggctagtc
ttccaggagtgctgacacaacctgtgagcacaggtaagaccaccacttct
gttccaagggacccgcctgagctcacaggacacaggaactaaggaacagc
ctgggatgtagtcctttttgtttctatctgcgcccttgagctgaccctgt
accacagctctccatacccaagtttctcccagatcgaactggtctcccaa
gagggctgacacacaggtttgcaggaggaacaagctacagccataggcaa
caagaccagcaaataccagagataatcagatggtaagagacaagagtaag
aacataagcaacagaaacgaaggcttcttggcataatcagaattcagttc
tcccaccatagcaagccctggataccccaacacaccaaaaaaaaaaaaaa
aaaaaaaaaaaaaagcaagactctgatttaaaatcacatctcatgataat
gatagaggactgtaaaatagggcataaataacaccttaaagaaatacagg
aaaacacaggtaaataggtagaagcccttaaagaggaaacacaaaaatcc
cttaaagaattacaggaaaacaagaccaaacagtgaaggaattgaacaga
accatcaaggatctaaaatgaaaatagaatcaataaagaaatcacaaagg
gacaaccctgaagttagaaaacctagaaaagagatcag

gaattctttgaaaacctggattacaaatagaaaagcctaaaaaatgcata
aattcctatatacatatgacttgccaaaattaaatcaagacataaacaaa
aacaaataacaatgcaaaaaagaaaacaatattgcagcagtactatacat
caaagaaatatacaggaccaggtggattgacccatagattctgtaagatt
ggaaagaactaacacattgaactattccagcaaaaggaagagaacaccgc
caaacttgttctgcgatgtcaacacattgccaacataaggatataataaa
aaagaaaactataggttaattctctgacaaatatagatacaaatactcac
acaatgttagtttggtttttggcaacttgatgcaagccacagtcatctag
gactagagaatgtctgtgggggaactgaacctgtccaactggactgtaag
aaagactgtggagcagtttcttgattactgattgatctgcaagggcccat
ctatgggcaagtgtttctggcacatataagaaagcaaactgagtgtccta
ggggaagcaagtctgtgggcagtattctcccatgccttctctttcagtgc
ctgcctctaggattttgcctagagtttctgccttgacttcttataagtca
ggatatgtaagccacgtaaacctgttcctcctcgagtggcttttggtcac
ggcaatggacctaaccaacaaacacaccatgatcaattgtggcttttggt
catggcaatggacctaaccaacatacgcaccatgatcaatttgcttttga
tgtaagcatgcaaatgtggctcagtatatgtaagcaaaaaatgtataata
caccacattaataaaataagaataggaattacatgaaggaatttaacaac
atttaattttaaaggaatgagtagcaatttaccagcatataacactctac
ctgcaagatgatagagtagatattcagtaaatgctttttcttgtttgggt
ttgttttgtctttcctaaatcagataaaatctgaaaacttggaaatagaa
agacatataaaaacaccaattaaatatgtatataaaaactctaggcaata
ttaaataaagtagaaactggaaactatctcaaatccgaatgagtcgggtg
ttcattctcttccatactctattcttaccaatgtggtaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_6405251_6405981
seq2: B6Ng01-296B12.b_47_777

seq1  GAATTCCATAATGTTTTGAAGTGTGATAGACATTATACAAAATGAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAATGTTTTGAAGTGTGATAGACATTATACAAAATGAGAGAA  50

seq1  GTCTGAAGGCCCATCCCCCACCACGCCAGGTTCTTGATGCTTTGTCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGGCCCATCCCCCACCACGCCAGGTTCTTGATGCTTTGTCACCA  100

seq1  GGCTGTCAGCACTTGGTCTCCAGGGGTGTTGCTTATTCACGAATGTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCAGCACTTGGTCTCCAGGGGTGTTGCTTATTCACGAATGTCTCA  150

seq1  GAATGTTCAGCCTCTCAGCGGGTAGCAGCATCTTTACTATGGAAAACTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTCAGCCTCTCAGCGGGTAGCAGCATCTTTACTATGGAAAACTAT  200

seq1  GGAAAAAGAATAAGGTCAGAAAGTGGACTGGAGTCTGCACTCAGAGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGAATAAGGTCAGAAAGTGGACTGGAGTCTGCACTCAGAGCACA  250

seq1  CTATATGCCACAGCACTCCGTACCCAAATACCGCCAGGAGAGGGCTAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGCCACAGCACTCCGTACCCAAATACCGCCAGGAGAGGGCTAGTC  300

seq1  TTCCAGGAGTGCTGACACAACCTGTGAGCACAGGTAAGACCACCACTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGAGTGCTGACACAACCTGTGAGCACAGGTAAGACCACCACTTCT  350

seq1  GTTCCAAGGGACCCGCCTGAGCTCACAGGACACAGGAACTAAGGAACAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAAGGGACCCGCCTGAGCTCACAGGACACAGGAACTAAGGAACAGC  400

seq1  CTGGGATGTAGTCCTTTTTGTTTCTATCTGCGCCCTTGAGCTGACCCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATGTAGTCCTTTTTGTTTCTATCTGCGCCCTTGAGCTGACCCTGT  450

seq1  ACCACAGCTCTCCATACCCAAGTTTCTCCCAGATCGAACTGGTCTCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGCTCTCCATACCCAAGTTTCTCCCAGATCGAACTGGTCTCCCAA  500

seq1  GAGGGCTGACACACAGGTTTGCAGGAGGAACAAGCTACAGCCATAGGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTGACACACAGGTTTGCAGGAGGAACAAGCTACAGCCATAGGCAA  550

seq1  CAAGACCAGCAAATACCAGAGATAATCAGATGGTAAGAGACAAGAGTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACCAGCAAATACCAGAGATAATCAGATGGTAAGAGACAAGAGTAAG  600

seq1  AACATAAGCAACAGAAACGAAGGCTTCTTGGCATAATCAGAATTCAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAGCAACAGAAACGAAGGCTTCTTGGCATAATCAGAATTCAGTTC  650

seq1  TCCCACCATAGCAAGCCCTGGATACCCCAACACACCAAAAAAAAAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCATAGCAAGCCCTGGATACCCCAACACACCAAAAAAAAAAAAAA  700

seq1  AAAAAAAAAAAAAAGCAAGACTCTGATTTAA  731
      |||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAGCAAGACTCTGATTTAA  731


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