BAC Information

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BAC

Clone NameB6Ng01-303J18
Chromosome4 (Build37)
Map Location 151,375,394 - 151,520,582
singlet/doubletdoublet
Overlap geneKlhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn
Upstream geneUts2, Per3, Vamp3, Camta1, LOC100041960, Dnajc11, Thap3, Phf13
Downstream geneLOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2, LOC100042028, Nphp4, LOC667039, Gm833
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303J18.bB6Ng01-303J18.g
ACCGA097369GA097370
length1,0121,069
definitionB6Ng01-303J18.b B6Ng01-303J18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,375,394 - 151,376,404)(151,519,521 - 151,520,582)
sequence
gaattcactttgtagactaggttgccctcaaattcagaaatctgcctgcc
tctaccaaccaagtgctgggattaaaggcgtgtgccaccactgccccgct
ataaaattaagtttttaaaatgtttttgttggggctggagagatggctcc
gtggttaagagcactgactgctctttcagaggtcctgatttcaatcccca
gcaaccacatggtaactcacaaccatatatagtgtaatgccctcttctgg
catgcaggcatacatgcaggtagagtgtttatatacattaaataaataag
taaaaatgtttttattgtatgtgtatttacagatattgtgtctgtgtata
tctgtataccacatgtgtgcttggggcatctggagtccagaagaaaggta
tcagatctcctgaaactggacttaggaaaggttgtgtgcggccatgtggg
tgctggcaatcaaacccaggttctcaagtccatgctgttaaccactgagc
aatctctgcagctgtttaaaaaaaaaaaagggctgtcctgggctggaggc
agtgcacacctttagtcccagcactcaggacacaggcaggtggatcgaca
tgagtttgaagccagcctggtctgcagagtgagctctagggcagccgcag
ctatatggagagaccccctctcgaagaaaaaacactgagacaaaacccaa
ggggacagttttcacaacgatccaggttacctcgtgcctatctaaaatca
gaatttgaacaccaaatgaagtgccttatctttcttttaaccagggatca
ccaggcaagcagcttggagtgtaagttaattgtgttaggggtagttttgc
tgtgtagcccaacctggcctcaaactcaaaatctccttgagttagactcc
tgatgctgaaattacaggctacgctaccacaccttgtgcaaatagttttt
taacttcagttttttgtacttatcctgagtgagcctaagtgtcctggtag
gggttggggagc
gaattctccagggccacagagttcaataaaaggaccccacagcctagcca
cagcctagccccaaagctgtggctccctactctttcagggcttcctggcc
tgctgtgaagggttgtaaattattcagaagagctcagctctctctggtgc
ctcagtgaaggaggaagggtgccatccctacccgtgggaaactcgatcct
gcccagggagactgtgggtaagcatgggccatggtgctgacaggtcacag
caactctggagggccaggcagctttgggaagggcctgtgaacaccggttg
tgccccagtgaacaccggttatgacttggggcactgcacagagcttgccg
gtgcaggaacgcgctgcactctttttctagtctaccccagttcattgaac
tgaatctttccagaagcagaagttgccattgaacacctccctctttctcc
tctcagtaccccacagaaaggagaccccctaatctgagagtcctgggggc
tatgcctaggagtgagggagacgggtgggctgacagtcctcctggataag
gacacaagtggcacactgtacatataatgtctgcaaccccacctggggca
actgaaaagcctcgaggggctggcagacatctttgcttctaacagggttc
gtgagtccaaccgccccgccccaccccatcccacgtgcgtttgccaagtc
tgctttgggctgctggaggagggcctgggctttgccctgactttgagctt
tgagactggagagaggggaaggacctggggtctttctctcaggctcctga
gcccttatcatctttggacagtgtcctacatgtctctctgtgtcttttct
ttctgttggatcccataactaatgaagctgcaggctttatcttcctcgcc
gtgtgtgcccagtgcctccccacgcagttgcgcctttgtttgatgactga
tgaggagactgggaatcctggggtctattgcctgggtgacaggttactta
ctgcctggtgactcttagatgggaactctcttctcatctcccttgtgctc
atttggcaagtgcacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_151375394_151376404
seq2: B6Ng01-303J18.b_45_1056

seq1  GAATTCACTTTGTAGACTAGGTTGCCCTCAAATTCAGAAATCTGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACTAGGTTGCCCTCAAATTCAGAAATCTGCCTGCC  50

seq1  TCTACCAACCAAGTGCTGGGATTAAAGGCGTGTGCCACCACTGCCCCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCAACCAAGTGCTGGGATTAAAGGCGTGTGCCACCACTGCCCCGCT  100

seq1  ATAAAATTAAGTTTTTAAAATGTTTTTGTTGGGGCTGGAGAGATGGCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTAAGTTTTTAAAATGTTTTTGTTGGGGCTGGAGAGATGGCTCC  150

seq1  GTGGTTAAGAGCACTGACTGCTCTTTCAGAGGTCCTGATTTCAATCCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTAAGAGCACTGACTGCTCTTTCAGAGGTCCTGATTTCAATCCCCA  200

seq1  GCAACCACATGGTAACTCACAACCATATATAGTGTAATGCCCTCTTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCACATGGTAACTCACAACCATATATAGTGTAATGCCCTCTTCTGG  250

seq1  CATGCAGGCATACATGCAGGTAGAGTGTTTATATACATTAAATAAATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGCATACATGCAGGTAGAGTGTTTATATACATTAAATAAATAAG  300

seq1  TAAAAATGTTTTTATTGTATGTGTATTTACAGATATTGTGTCTGTGTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGTTTTTATTGTATGTGTATTTACAGATATTGTGTCTGTGTATA  350

seq1  TCTGTATACCACATGTGTGCTTGGGGCATCTGGAGTCCAGAAGAAAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATACCACATGTGTGCTTGGGGCATCTGGAGTCCAGAAGAAAGGTA  400

seq1  TCAGATCTCCTGAAACTGGACTTAGGAAAGGTTGTGTGCGGCCATGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCTCCTGAAACTGGACTTAGGAAAGGTTGTGTGCGGCCATGTGGG  450

seq1  TGCTGGCAATCAAACCCAGGTTCTCAAGTCCATGCTGTTAACCACTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCAATCAAACCCAGGTTCTCAAGTCCATGCTGTTAACCACTGAGC  500

seq1  AATCTCTGCAGCTGTTTAAAAAAAAAAAAGGGCTGTCCTGGGCTGGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTGCAGCTGTTTAAAAAAAAAAAAGGGCTGTCCTGGGCTGGAGGC  550

seq1  AGTGCACACCTTTAGTCCCAGCACTCAGGACACAGGCAGGTGGATCGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCACACCTTTAGTCCCAGCACTCAGGACACAGGCAGGTGGATCGACA  600

seq1  TGAGTTTGAAGCCAGCCTGGTCTGCAGAGTGAGCTCTAGGGCAGCCGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGAAGCCAGCCTGGTCTGCAGAGTGAGCTCTAGGGCAGCCGCAG  650

seq1  CTATATGGAGAGACCCCCTCTCGAAGAAAAAACACTGAGACAAAACCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGGAGAGACCCCCTCTCGAAGAAAAAACACTGAGACAAAACCCAA  700

seq1  GGGGACAGTTTTCACAACGATCCAGGTTACCTCGTGCCTATCTAAAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACAGTTTTCACAACGATCCAGGTTACCTCGTGCCTATCTAAAATCA  750

seq1  GAATTTGAACACCAAATGAAGTGCCTTATCTTTCTTTTAACCAGGGATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGAACACCAAATGAAGTGCCTTATCTTTCTTTTAACCAGGGATCA  800

seq1  CCAGGCAAGCAGCTTGGAGTGTAAGTTAATTGTGTTAGGGGTAGTTTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAAGCAGCTTGGAGTGTAAGTTAATTGTGTTAGGGGTAGTTTTGC  850

seq1  TGTGTAGCCCAACCTGGCCTCAAACTCAAAATCTCCTTGAGTTAGACTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGCCCAACCTGGCCTCAAACTCAAAATCTCCTTGAGTTAGACTCC  900

seq1  TGAATGCTGAAATTACAGGCCTACGCTACCACACCCTGTGCAAATAGTTT  950
      || |||||||||||||||| ||||||||||||||| ||||||||||||||
seq2  TG-ATGCTGAAATTACAGG-CTACGCTACCACACCTTGTGCAAATAGTTT  948

seq1  TTTAAC-TCAGTTTTTTGTACTTAT-CTGAGTGAGCCTAAGTGTCCTGGT  998
      |||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTAACTTCAGTTTTTTGTACTTATCCTGAGTGAGCCTAAGTGTCCTGGT  998

seq1  AGGGG-TGGGGAGC  1011
      ||||| ||||||||
seq2  AGGGGTTGGGGAGC  1012

seq1: chr4_151519521_151520582
seq2: B6Ng01-303J18.g_67_1135 (reverse)

seq1  GTGTGTGCACTTGCCAAATGGGCAC-AGGGAGATGAAGAAGAGAAGTTCC  49
      |||||||||||||||||||| |||| ||||||||| ||||||||  | ||
seq2  GTGTGTGCACTTGCCAAATGAGCACAAGGGAGATG-AGAAGAGAGTTCCC  49

seq1  ATCT-AGAGTCA-CAGGCAGTAAGTAACCTGTCA-CCAGGC-ATAGA-CC  94
      |||| ||||||| ||||||||||||||||||||| |||||| ||||| ||
seq2  ATCTAAGAGTCACCAGGCAGTAAGTAACCTGTCACCCAGGCAATAGACCC  99

seq1  CAGGATT-CCAGTCTCCTCATCAGTCATCAAACAAAGGCGCAACTGCGT-  142
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  CAGGATTCCCAGTCTCCTCATCAGTCATCAAACAAAGGCGCAACTGCGTG  149

seq1  GGGAGGCACTGGGCACACACGGCGAGGAAGATAAAGCCTGCAGCTTCATT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCACTGGGCACACACGGCGAGGAAGATAAAGCCTGCAGCTTCATT  199

seq1  AGTTATGGGATCCAACAGAAAGAAAAGACACAGAGAGACATGTAGGACAC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGGGATCCAACAGAAAGAAAAGACACAGAGAGACATGTAGGACAC  249

seq1  TGTCCAAAGATGATAAGGGCTCAGGAGCCTGAGAGAAAGACCCCAGGTCC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAAGATGATAAGGGCTCAGGAGCCTGAGAGAAAGACCCCAGGTCC  299

seq1  TTCCCCTCTCTCCAGTCTCAAAGCTCAAAGTCAGGGCAAAGCCCAGGCCC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCTCTCCAGTCTCAAAGCTCAAAGTCAGGGCAAAGCCCAGGCCC  349

seq1  TCCTCCAGCAGCCCAAAGCAGACTTGGCAAACGCACGTGGGATGGGGTGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGCAGCCCAAAGCAGACTTGGCAAACGCACGTGGGATGGGGTGG  399

seq1  GGCGGGGCGGTTGGACTCACGAACCCTGTTAGAAGCAAAGATGTCTGCCA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGCGGTTGGACTCACGAACCCTGTTAGAAGCAAAGATGTCTGCCA  449

seq1  GCCCCTCGAGGCTTTTCAGTTGCCCCAGGTGGGGTTGCAGACATTATATG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTCGAGGCTTTTCAGTTGCCCCAGGTGGGGTTGCAGACATTATATG  499

seq1  TACAGTGTGCCACTTGTGTCCTTATCCAGGAGGACTGTCAGCCCACCCGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGTGCCACTTGTGTCCTTATCCAGGAGGACTGTCAGCCCACCCGT  549

seq1  CTCCCTCACTCCTAGGCATAGCCCCCAGGACTCTCAGATTAGGGGGTCTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCACTCCTAGGCATAGCCCCCAGGACTCTCAGATTAGGGGGTCTC  599

seq1  CTTTCTGTGGGGTACTGAGAGGAGAAAGAGGGAGGTGTTCAATGGCAACT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTGGGGTACTGAGAGGAGAAAGAGGGAGGTGTTCAATGGCAACT  649

seq1  TCTGCTTCTGGAAAGATTCAGTTCAATGAACTGGGGTAGACTAGAAAAAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCTGGAAAGATTCAGTTCAATGAACTGGGGTAGACTAGAAAAAG  699

seq1  AGTGCAGCGCGTTCCTGCACCGGCAAGCTCTGTGCAGTGCCCCAAGTCAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGCGCGTTCCTGCACCGGCAAGCTCTGTGCAGTGCCCCAAGTCAT  749

seq1  AACCGGTGTTCACTGGGGCACAACCGGTGTTCACAGGCCCTTCCCAAAGC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGGTGTTCACTGGGGCACAACCGGTGTTCACAGGCCCTTCCCAAAGC  799

seq1  TGCCTGGCCCTCCAGAGTTGCTGTGACCTGTCAGCACCATGGCCCATGCT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCCCTCCAGAGTTGCTGTGACCTGTCAGCACCATGGCCCATGCT  849

seq1  TACCCACAGTCTCCCTGGGCAGGATCGAGTTTCCCACGGGTAGGGATGGC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACAGTCTCCCTGGGCAGGATCGAGTTTCCCACGGGTAGGGATGGC  899

seq1  ACCCTTCCTCCTTCACTGAGGCACCAGAGAGAGCTGAGCTCTTCTGAATA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCCTCCTTCACTGAGGCACCAGAGAGAGCTGAGCTCTTCTGAATA  949

seq1  ATTTACAACCCTTCACAGCAGGCCAGGAAGCCCTGAAAGAGTAGGGAGCC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAACCCTTCACAGCAGGCCAGGAAGCCCTGAAAGAGTAGGGAGCC  999

seq1  ACAGCTTTGGGGCTAGGCTGTGGCTAGGCTGTGGGGTCCTTTTATTGAAC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTGGGGCTAGGCTGTGGCTAGGCTGTGGGGTCCTTTTATTGAAC  1049

seq1  TCTGTGGCCCTGGAGAATTC  1062
      ||||||||||||||||||||
seq2  TCTGTGGCCCTGGAGAATTC  1069