BAC Information

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BAC

Clone NameB6Ng01-305J23
Chromosome4 (Build37)
Map Location 92,122,167 - 92,123,293
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
Downstream geneLOC620269, LOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305J23.bB6Ng01-305J23.g
ACCGA098868GA098869
length1,1221,178
definitionB6Ng01-305J23.b B6Ng01-305J23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttcctccatctgagctggaatatcaaactaaattcctcaggt
agatcctttttgtgttgtgttgcctctttcttttgtaaataaaaattgca
tttaatgactatagcaacatctgcaaatgtgagccccatatgaatgaccc
agagagggacatgttctgtacacaaagtccttgggatctgctgctggaaa
ttaatgcttcccattgaagactctcttatcaaaactgtgtaagattctag
gtaataataacatgcttttataatgatttaaacttgcacaatcaagcact
tgtctaagtttgggccatatttaaaagaaactctcccagaacataatagt
ccatatttgtatctgggacctcacagtacagtatcaggaaattttatctt
atatttaaaatgactaatgtgtattttgtaattaggtatatatcatttat
aatttttcatctttcttgaacatcttcctattaccacaactatctcatga
atataaaacctgagataaatatattacattttctaattaaaatattttat
actgacactattttaaaattccattttgctgaagagtatgcaatgattgc
actttataaaattatttccttcagaacatttcacaggtctttaccttttt
atgtaattgaatagcaattctggtactatactcataagacccataaaaat
gcatatatgtaaaactcttacaagtaatacagatatatgaacatatgatc
atgaatttgtagaattcaattgatgtaatcattgaagtgcttattacatt
atataatgacactgtatatattatgtcaaaaaaatcttaaaatattcatt
tggtgcccagaatgcagcaaatatacattcaaaatataaagaaattatga
gatgtattatttccagaaatatctaagataaacatgacaatgaatatata
gatatatagggaactttcccggatagcatttgaaatgtatatatgaaaat
atctataaataaataaataataggaaaaaggatatagtagaagaattaaa
taatcataaatatgtttagaaaatacatcctcttgacgttcagttatatc
tattaatttctagaaaataaag

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacattcttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
tagaatacccaagatataagatacaatttgctaaacaaatgaaactcaag
aagaatgaagactgaagtgtggacactatgcctctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaaggagctagagaaagtagccaaggagctaaagggatctgcaaccc
tatagtgaacaacattatgaactaccagtacctcgagctctgactctagc
tgtattatgtatccaaaggatgccttagtccggcatcactgaagaagaag
gtcatgaacacgcaacataattgccagttacggtagccagtctaaaaggg
taatgtggttgatcatggggtaatctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92122167_92123293
seq2: B6Ng01-305J23.b_46_1167 (reverse)

seq1  CTTTATTTTCTAGAAATT-ATAGATATTACTTGAACCTTCAGA-GATGTA  48
      |||||||||||||||||| |||||||| || ||||| |  ||| ||||||
seq2  CTTTATTTTCTAGAAATTAATAGATATAAC-TGAACGTCAAGAGGATGTA  49

seq1  -TTTCTAAACATATTTATGATTTAATTTTAATTTCTCTACTATATTCTTT  97
       |||||||||||||||||||||    |||||||  |||||||||| ||||
seq2  TTTTCTAAACATATTTATGATT---ATTTAATTCTTCTACTATATCCTTT  96

seq1  TTTCTTATTTATTTATTTATTTATTAGATATTTTCATTATATACATTTCA  147
      || ||   ||||||||||||||| |||||||||||| |||||||||||||
seq2  TTCCT--ATTATTTATTTATTTA-TAGATATTTTCA-TATATACATTTCA  142

seq1  AATGCTATCC-GGAAAGTTCCCTATATATCTATTATATTCATTGTCATGT  196
      |||||||||| ||||||||||||||||||||| |||||||||||||||||
seq2  AATGCTATCCGGGAAAGTTCCCTATATATCTA-TATATTCATTGTCATGT  191

seq1  TTATCTTAGATATTTCTGGAAATAATACATCTCATAATTTCTTTATATTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTAGATATTTCTGGAAATAATACATCTCATAATTTCTTTATATTT  241

seq1  TGAATGTATATTTGCTGCATTCTGGGCACCAAATGAATATTTTAAGATTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTATATTTGCTGCATTCTGGGCACCAAATGAATATTTTAAGATTT  291

seq1  TTTTGACATAATATATACAGTGTCATTATATAATGTAATAAGCACTTCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACATAATATATACAGTGTCATTATATAATGTAATAAGCACTTCAA  341

seq1  TGATTACATCAATTGAATTCTACAAATTCATGATCATATGTTCATATATC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACATCAATTGAATTCTACAAATTCATGATCATATGTTCATATATC  391

seq1  TGTATTACTTGTAAGAGTTTTACATATATGCATTTTTATGGGTCTTATGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTACTTGTAAGAGTTTTACATATATGCATTTTTATGGGTCTTATGA  441

seq1  GTATAGTACCAGAATTGCTATTCAATTACATAAAAAGGTAAAGACCTGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGTACCAGAATTGCTATTCAATTACATAAAAAGGTAAAGACCTGTG  491

seq1  AAATGTTCTGAAGGAAATAATTTTATAAAGTGCAATCATTGCATACTCTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCTGAAGGAAATAATTTTATAAAGTGCAATCATTGCATACTCTT  541

seq1  CAGCAAAATGGAATTTTAAAATAGTGTCAGTATAAAATATTTTAATTAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAATGGAATTTTAAAATAGTGTCAGTATAAAATATTTTAATTAGA  591

seq1  AAATGTAATATATTTATCTCAGGTTTTATATTCATGAGATAGTTGTGGTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATATATTTATCTCAGGTTTTATATTCATGAGATAGTTGTGGTA  641

seq1  ATAGGAAGATGTTCAAGAAAGATGAAAAATTATAAATGATATATACCTAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAGATGTTCAAGAAAGATGAAAAATTATAAATGATATATACCTAA  691

seq1  TTACAAAATACACATTAGTCATTTTAAATATAAGATAAAATTTCCTGATA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAATACACATTAGTCATTTTAAATATAAGATAAAATTTCCTGATA  741

seq1  CTGTACTGTGAGGTCCCAGATACAAATATGGACTATTATGTTCTGGGAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGTGAGGTCCCAGATACAAATATGGACTATTATGTTCTGGGAGA  791

seq1  GTTTCTTTTAAATATGGCCCAAACTTAGACAAGTGCTTGATTGTGCAAGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTAAATATGGCCCAAACTTAGACAAGTGCTTGATTGTGCAAGT  841

seq1  TTAAATCATTATAAAAGCATGTTATTATTACCTAGAATCTTACACAGTTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCATTATAAAAGCATGTTATTATTACCTAGAATCTTACACAGTTT  891

seq1  TGATAAGAGAGTCTTCAATGGGAAGCATTAATTTCCAGCAGCAGATCCCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGAGAGTCTTCAATGGGAAGCATTAATTTCCAGCAGCAGATCCCA  941

seq1  AGGACTTTGTGTACAGAACATGTCCCTCTCTGGGTCATTCATATGGGGCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTTGTGTACAGAACATGTCCCTCTCTGGGTCATTCATATGGGGCT  991

seq1  CACATTTGCAGATGTTGCTATAGTCATTAAATGCAATTTTTATTTACAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTGCAGATGTTGCTATAGTCATTAAATGCAATTTTTATTTACAAA  1041

seq1  AGAAAGAGGCAACACAACACAAAAAGGATCTACCTGAGGAATTTAGTTTG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGGCAACACAACACAAAAAGGATCTACCTGAGGAATTTAGTTTG  1091

seq1  ATATTCCAGCTCAGATGGAGGAAAGGAATTC  1127
      |||||||||||||||||||||||||||||||
seq2  ATATTCCAGCTCAGATGGAGGAAAGGAATTC  1122


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