BAC Information

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BAC

Clone NameB6Ng01-305O15
Chromosome4 (Build37)
Map Location 132,658,051 - 132,758,782
singlet/doubletdoublet
Overlap geneWasf2
Upstream geneOprd1, LOC664894, Ythdf2, LOC664903, Gmeb1, Rnu11, Taf12, 9530096D07Rik, LOC100039864, Trspap1, Rcc1, Snhg3, Phactr4, Med18, Sesn2, Atpif1, Dnajc8, Ptafr, Eya3, Xkr8, Smpdl3b, Rpa2, BC013712, LOC100039917, Ppp1r8, Stx12, OTTMUSG00000010099, BC008163, Fgr, Ahdc1, LOC100041932
Downstream geneGpr3, Cd164l2, Fcnc-ps, Map3k6, Sytl1, D4Ertd196e, LOC100041990, LOC100042018, Wdtc1, Slc9a1, 4732473B16Rik, 2300002D11Rik, 1810019J16Rik, Nudc, Nr0b2, Gpatch3, Atpbd1b, Sfn, Zdhhc18, LOC545683, Pigv, Arid1a, Rps6ka1, 4930429E23Rik, LOC100042151, Hmgn2, Dhdds, Lin28, Aim1l, Cd52, Ubxd5, Sh3bgrl3, Ccdc21, EG665186
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305O15.bB6Ng01-305O15.g
ACCGA099084GA099085
length1,063697
definitionB6Ng01-305O15.b B6Ng01-305O15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,757,726 - 132,758,782)(132,658,051 - 132,658,747)
sequence
gaattccaggccagcctgatctacagagtgagttccaggtcagccaggat
tacacagagaaaccctgtcttaaaaaaagaaaggagagagagagagagag
agagagagagagagagagagagagagagagagagagagagagaaagagaa
agagagagagagaggcaggcattgtcgcacagtggctgatacctagaatt
ttaacacttaggaggctggggcaaaaggctcaccagtagtttgaggccag
cctggactacagagaccctgtctcaaaataaataaatatccacataaacc
aactaaccacagtcatggataataaacctgtgcgtgaactcagatgcact
acttgaggcaagcataaacgaactcaggtgagtgcacacactggtactcc
aggcctatgtgcacacctcactcatgcgtgcatacacagatgggcaagca
agcagccatgggctagggagaggctcctttgacttgtctcatgcctctgc
ataaaagcaagtcagggatttacccagtgcaggaggaagcaatggaggaa
tccacacagctttcaagatgcattgtccccagcctccctgctgagggtcc
aagtctagaacctcctcagagcttcccccaagtcttcatttggccctgtg
agtattttctgaagaaaaaagagctcccgactttgccactcggctccagt
ctccttatctctgggcccaacctcataaggtgctgtgttctcttgagcat
cactaagtgtgtttctattttgacatcggatgccagttggctgtgtggtg
ctgggcccgccgcaaagcccttctgtgcctttccacatctgtacaacagg
aaccaaaggctttaagtctgtcccgaaggaagcccactgacccctttaca
gatgtgctctacccgggtgtacatctgggagcgttattcacttgcaagac
accgactggaacaccacatgggaatgtctgcacctaagtatcaggctcaa
tgccttgctgaataaaggcagttgaagtcaaaccggaaagcaggggagct
ttgaacttggagc
gaattcaagaccagtctgggttatatagtgagatcttccttaaaagagaa
aaaaaaaaaaaaaaaacagggagacaggctggtttgagagaccaatgtca
gggaggcagttttggatgtaggcgtgtgcatatgtgtatacatgcatgga
tccacatgtatagaggtcagaggttactcttcaagtgtctgtcagtcact
ctcccctcatcttgtccttcccttcccccttagaatgcttcaagagcatt
tgagtgtcacccttgtcgtccagggaccacaccacttttcttcttcttct
tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc
ttcttcttcttcttcttcttcttcttcttctttttcttcttcttcttctt
cttcttctcacgccaattgtagggtgctgctgaagctcacactgccttat
tttttggcacagggttggttgctcactgagcctggagtttaccagttcaa
gtcccggggtgcctcccatcttcatttttctcgagattatagactcattt
tgctccttgtgtggcaagcattttgtcaattgaaccatctccccacatcc
cacctttaaattatttatctatgtgtgtgtgtgtgtgcctgtatgagttt
gtgtgcccacagacaccagaggagaggggtatcagatgcctcggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_132757726_132758782
seq2: B6Ng01-305O15.b_46_1108 (reverse)

seq1  GCTCC-AGCTCAAAGCT-CCCTGCTTTCCGGTCTGGACTTCAACTGCCTT  48
      ||||| || |||||||| |||||||||||||| | |||||||||||||||
seq2  GCTCCAAGTTCAAAGCTCCCCTGCTTTCCGGT-TTGACTTCAACTGCCTT  49

seq1  TATTCAGCAAGGCATTGAGCCTGATAC-TAGGTGCAGACATTCCACTGTG  97
      ||||||||||||||||||||||||||| ||||||||||||||||  ||||
seq2  TATTCAGCAAGGCATTGAGCCTGATACTTAGGTGCAGACATTCCCATGTG  99

seq1  GTGTTCCAGTCGGTGTCTTTGCAGCTG-ATAACGCTCCCAGATGTACACC  146
      ||||||||||||||||| |||||  || ||||||||||||||||||||||
seq2  GTGTTCCAGTCGGTGTC-TTGCAAGTGAATAACGCTCCCAGATGTACACC  148

seq1  CGGGTAGAGCACATCTGTAAAGGGGTCAGT-GGCTTCC-TCGGGACAGAC  194
      |||||||||||||||||||||||||||||| ||||||| |||||||||||
seq2  CGGGTAGAGCACATCTGTAAAGGGGTCAGTGGGCTTCCTTCGGGACAGAC  198

seq1  TTAAAGCCTTTGGTTCCTGTTGTACAGATGTGGAAAGGCACAGAAGGGCT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCCTTTGGTTCCTGTTGTACAGATGTGGAAAGGCACAGAAGGGCT  248

seq1  TTGCGGCGGGCCCAGCACCACACAGCCAACTGGCATCCGATGTCAAAATA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGGCGGGCCCAGCACCACACAGCCAACTGGCATCCGATGTCAAAATA  298

seq1  GAAACAC-CTTAGTGATGCTCAAGAGAACACAGCACCTTATGAGGTTGGG  343
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACACTTAGTGATGCTCAAGAGAACACAGCACCTTATGAGGTTGGG  348

seq1  CCCAGAGATAAGGAGACTGGAGCCGAGTGGCAAAGTCGGGAGCTC-TTTT  392
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCCAGAGATAAGGAGACTGGAGCCGAGTGGCAAAGTCGGGAGCTCTTTTT  398

seq1  TCTTCAGAAAATACTCACAGGGCCAAATGAAGACTTGGGGGAAGCTCTGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGAAAATACTCACAGGGCCAAATGAAGACTTGGGGGAAGCTCTGA  448

seq1  GGAGGTTCTAGACTTGGACCCTCAGCAGGGAGGCTGGGGACAATGCATCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTTCTAGACTTGGACCCTCAGCAGGGAGGCTGGGGACAATGCATCT  498

seq1  TGAAAGCTGTGTGGATTCCTCCATTGCTTCCTCCTGCACTGGGTAAATCC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCTGTGTGGATTCCTCCATTGCTTCCTCCTGCACTGGGTAAATCC  548

seq1  CTGACTTGCTTTTATGCAGAGGCATGAGACAAGTCAAAGGAGCCTCTCCC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTTGCTTTTATGCAGAGGCATGAGACAAGTCAAAGGAGCCTCTCCC  598

seq1  TAGCCCATGGCTGCTTGCTTGCCCATCTGTGTATGCACGCATGAGTGAGG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCATGGCTGCTTGCTTGCCCATCTGTGTATGCACGCATGAGTGAGG  648

seq1  TGTGCACATAGGCCTGGAGTACCAGTGTGTGCACTCACCTGAGTTCGTTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACATAGGCCTGGAGTACCAGTGTGTGCACTCACCTGAGTTCGTTT  698

seq1  ATGCTTGCCTCAAGTAGTGCATCTGAGTTCACGCACAGGTTTATTATCCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGCCTCAAGTAGTGCATCTGAGTTCACGCACAGGTTTATTATCCA  748

seq1  TGACTGTGGTTAGTTGGTTTATGTGGATATTTATTTATTTTGAGACAGGG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTGGTTAGTTGGTTTATGTGGATATTTATTTATTTTGAGACAGGG  798

seq1  TCTCTGTAGTCCAGGCTGGCCTCAAACTACTGGTGAGCCTTTTGCCCCAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTAGTCCAGGCTGGCCTCAAACTACTGGTGAGCCTTTTGCCCCAG  848

seq1  CCTCCTAAGTGTTAAAATTCTAGGTATCAGCCACTGTGCGACAATGCCTG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTAAGTGTTAAAATTCTAGGTATCAGCCACTGTGCGACAATGCCTG  898

seq1  CCTCTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC  948

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTCTTTTTTTAAGACA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTCTTTTTTTAAGACA  998

seq1  GGGTTTCTCTGTGTAATCCTGGCTGACCTGGAACTCACTCTGTAGATCAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTCTGTGTAATCCTGGCTGACCTGGAACTCACTCTGTAGATCAG  1048

seq1  GCTGGCCTGGAATTC  1057
      |||||||||||||||
seq2  GCTGGCCTGGAATTC  1063

seq1: chr4_132658051_132658747
seq2: B6Ng01-305O15.g_67_763

seq1  GAATTCAAGACCAGTCTGGGTTATATAGTGAGATCTTCCTTAAAAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACCAGTCTGGGTTATATAGTGAGATCTTCCTTAAAAGAGAA  50

seq1  AAAAAAAAAAAAAAAACAGGGAGACAGGCTGGTTTGAGAGACCAATGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAACAGGGAGACAGGCTGGTTTGAGAGACCAATGTCA  100

seq1  GGGAGGCAGTTTTGGATGTAGGCGTGTGCATATGTGTATACATGCATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGTTTTGGATGTAGGCGTGTGCATATGTGTATACATGCATGGA  150

seq1  TCCACATGTATAGAGGTCAGAGGTTACTCTTCAAGTGTCTGTCAGTCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATGTATAGAGGTCAGAGGTTACTCTTCAAGTGTCTGTCAGTCACT  200

seq1  CTCCCCTCATCTTGTCCTTCCCTTCCCCCTTAGAATGCTTCAAGAGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCATCTTGTCCTTCCCTTCCCCCTTAGAATGCTTCAAGAGCATT  250

seq1  TGAGTGTCACCCTTGTCGTCCAGGGACCACACCACTTTTCTTCTTCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTCACCCTTGTCGTCCAGGGACCACACCACTTTTCTTCTTCTTCT  300

seq1  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC  350

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTT  400

seq1  CTTCTTCTCACGCCAATTGTAGGGTGCTGCTGAAGCTCACACTGCCTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTCACGCCAATTGTAGGGTGCTGCTGAAGCTCACACTGCCTTAT  450

seq1  TTTTTGGCACAGGGTTGGTTGCTCACTGAGCCTGGAGTTTACCAGTTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGCACAGGGTTGGTTGCTCACTGAGCCTGGAGTTTACCAGTTCAA  500

seq1  GTCCCGGGGTGCCTCCCATCTTCATTTTTCTCGAGATTATAGACTCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCGGGGTGCCTCCCATCTTCATTTTTCTCGAGATTATAGACTCATTT  550

seq1  TGCTCCTTGTGTGGCAAGCATTTTGTCAATTGAACCATCTCCCCACATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTGTGTGGCAAGCATTTTGTCAATTGAACCATCTCCCCACATCC  600

seq1  CACCTTTAAATTATTTATCTATGTGTGTGTGTGTGTGCCTGTATGAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTAAATTATTTATCTATGTGTGTGTGTGTGTGCCTGTATGAGTTT  650

seq1  GTGTGCCCACAGACACCAGAGGAGAGGGGTATCAGATGCCTCGGAGC  697
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCCACAGACACCAGAGGAGAGGGGTATCAGATGCCTCGGAGC  697