BAC Information

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BAC

Clone NameB6Ng01-306P22
Chromosome4 (Build37)
Map Location 56,807,534 - 56,808,727
singlet/doubletsinglet
Overlap geneIkbkap
Upstream geneActl7b, Actl7a
Downstream geneBC026590, Ctnnal1, D730040F13Rik, 6430704M03Rik, Epb4.1l4b, Ptpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306P22.g
ACCGA099886
length1,132
definitionB6Ng01-306P22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtttatagctatagaaatgtcttagaaaactagcaatctttaa
agcagtagaggagggccctggggacttttatgttgaatttatacagtcag
tagctaaggagaagcatctggaggctggcctgctcagagcttgtgtttca
gggcattatgtgtgcatgcatctgtctacctcttccacctgggcctcctc
attctggctcagtagcttctggtgccccagacacttggaaatgactgatt
tgttacatgaactcctaagctcaacagaccctgattatgatgacaaaaga
ctttgaagtgatcgcagaggagcagatccaccaggatgattttggagaag
gtaagcgtttcttggaaacattctgtgacctgttttacccattttcttac
tcataacattcgttgtcataagccgaaagttcatctcagttctttacaga
catgtcactaacctcccttcagatctgacaggtagctttctcgatattct
ggtgaatggaaatctatccatgaggtctcctggatatcacttaaacctga
ggaaagatttacactagaattacagggaaagaattattgaggttagaata
aggggagcatgtttagagtacagtgtattagtgggccacaagaaaggagt
aggggcagttagaaggcagtgttcttttccttccagctagactagatcag
ctttagatcagctagagttttgcttttctttttttttttaaccttgcagt
aaattagaggaaagatagttgaagtttgtgctttaagttctttgtgaggg
cagacataggctccagtctgcagatccctgctgtgagcccatcactcact
atcggtctgattggaagacttttcttatttaactctggtcctctactctc
ttggggacctgtcggaggaagctccaaggctgagcacagcagtaagccaa
ccacctccttctatgtgtggtggcaggagtgtccttgggaagggtggtat
tcaatcccactggacatgcatccatgcaagcagaactaagaaatggcctg
tgtgagccataattttattgaactggaaggtagcctgccctccaaacata
atggacaatgagggaagtcttggtccttggat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_56807534_56808727
seq2: B6Ng01-306P22.g_66_1197 (reverse)

seq1  ATCCAGAGCCAGCACAGACTTTCTGCTCCTAGAGGCAGACGAGGCCTCAT  50
                                                        
seq2  --------------------------------------------------  0

seq1  CCACAGGAGGCAACAGAAAGATGGTCCTGACACTATCC-AGGACCAAGAC  99
                                        |||| |||||||||||
seq2  ----------------------------------ATCCAAGGACCAAGAC  16

seq1  TTCCCTC-TTG-CCACTAATTCTGAA--GCAGACTACC-TACAATTCAAT  144
      ||||||| ||| ||| ||  | || |  |||| ||||| | || ||||||
seq2  TTCCCTCATTGTCCATTATGTTTGGAGGGCAGGCTACCTTCCAGTTCAAT  66

seq1  -AAATTATGGCTCAACACA-GCCATTTC-TAG-TCTGCTTGCAT-GATGC  189
       |||||||||||| ||||| |||||||| ||| ||||||||||| |||||
seq2  AAAATTATGGCTC-ACACAGGCCATTTCTTAGTTCTGCTTGCATGGATGC  115

seq1  ATGTCCAAGTGTGAT--GATA-CACCCT--CCAAGGACACT-CTGCCACC  233
      |||||| |||| |||   ||| ||||||  ||||||||||| ||||||||
seq2  ATGTCC-AGTGGGATTGAATACCACCCTTCCCAAGGACACTCCTGCCACC  164

seq1  ACACAT-GAAG--AGTGG-TGGC-TACTGCTGTGCTCAGCC-TGGAGCTT  277
      |||||| ||||   |||| |||| ||||||||||||||||| ||||||||
seq2  ACACATAGAAGGAGGTGGTTGGCTTACTGCTGTGCTCAGCCTTGGAGCTT  214

seq1  -CTCCGACAGGTCCCCAAGAG-GTAGAGGACCAGAGTTAAATAAGAAAAG  325
       |||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCTCCGACAGGTCCCCAAGAGAGTAGAGGACCAGAGTTAAATAAGAAAAG  264

seq1  TCTTCCAATCAGACCGATAGTGAGTGATGGGCTCACAGCAGGGATCTGCA  375
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAATCAGACCGATAGTGAGTGATGGGCTCACAGCAGGGATCTGCA  314

seq1  GACTGGAGCCTATGTCTGCCCTCACAAAGAAACTTAAAGCACAAACTTCA  425
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GACTGGAGCCTATGTCTGCCCTCACAAAG-AACTTAAAGCACAAACTTCA  363

seq1  ACTATCTTTCCTCTAATTTACTGCAAGGTTAAAAAAAAAAAGAAAAGCAA  475
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTTTCCTCTAATTTACTGCAAGGTTAAAAAAAAAAAGAAAAGCAA  413

seq1  AACTCTAGCTGATCTAAAGCTGATCTAGTCTAGCTGGAAGGAAAAGAACA  525
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAGCTGATCTAAAGCTGATCTAGTCTAGCTGGAAGGAAAAGAACA  463

seq1  CTGCCTTCTAACTGCCCCTACTCCTTTCTTGTGGCCCACTAATACACTGT  575
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCTAACTGCCCCTACTCCTTTCTTGTGGCCCACTAATACACTGT  513

seq1  ACTCTAAACATGCTCCCCTTATTCTAACCTCAATAATTCTTTCCCTGTAA  625
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAAACATGCTCCCCTTATTCTAACCTCAATAATTCTTTCCCTGTAA  563

seq1  TTCTAGTGTAAATCTTTCCTCAGGTTTAAGTGATATCCAGGAGACCTCAT  675
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTGTAAATCTTTCCTCAGGTTTAAGTGATATCCAGGAGACCTCAT  613

seq1  GGATAGATTTCCATTCACCAGAATATCGAGAAAGCTACCTGTCAGATCTG  725
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGATTTCCATTCACCAGAATATCGAGAAAGCTACCTGTCAGATCTG  663

seq1  AAGGGAGGTTAGTGACATGTCTGTAAAGAACTGAGATGAACTTTCGGCTT  775
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGGTTAGTGACATGTCTGTAAAGAACTGAGATGAACTTTCGGCTT  713

seq1  ATGACAACGAATGTTATGAGTAAGAAAATGGGTAAAACAGGTCACAGAAT  825
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAACGAATGTTATGAGTAAGAAAATGGGTAAAACAGGTCACAGAAT  763

seq1  GTTTCCAAGAAACGCTTACCTTCTCCAAAATCATCCTGGTGGATCTGCTC  875
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAAGAAACGCTTACCTTCTCCAAAATCATCCTGGTGGATCTGCTC  813

seq1  CTCTGCGATCACTTCAAAGTCTTTTGTCATCATAATCAGGGTCTGTTGAG  925
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCGATCACTTCAAAGTCTTTTGTCATCATAATCAGGGTCTGTTGAG  863

seq1  CTTAGGAGTTCATGTAACAAATCAGTCATTTCCAAGTGTCTGGGGCACCA  975
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAGTTCATGTAACAAATCAGTCATTTCCAAGTGTCTGGGGCACCA  913

seq1  GAAGCTACTGAGCCAGAATGAGGAGGCCCAGGTGGAAGAGGTAGACAGAT  1025
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTACTGAGCCAGAATGAGGAGGCCCAGGTGGAAGAGGTAGACAGAT  963

seq1  GCATGCACACATAATGCCCTGAAACACAAGCTCTGAGCAGGCCAGCCTCC  1075
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCACACATAATGCCCTGAAACACAAGCTCTGAGCAGGCCAGCCTCC  1013

seq1  AGATGCTTCTCCTTAGCTACTGACTGTATAAATTCAACATAAAAGTCCCC  1125
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTTCTCCTTAGCTACTGACTGTATAAATTCAACATAAAAGTCCCC  1063

seq1  AGGGCCCTCCTCTACTGCTTTAAAGATTGCTAGTTTTCTAAGACATTTCT  1175
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCTCCTCTACTGCTTTAAAGATTGCTAGTTTTCTAAGACATTTCT  1113

seq1  ATAGCTATAAACTGAATTC  1194
      |||||||||||||||||||
seq2  ATAGCTATAAACTGAATTC  1132