BAC Information

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BAC

Clone NameB6Ng01-308E18
Chromosome4 (Build37)
Map Location 22,599,519 - 22,600,638
singlet/doubletsinglet
Overlap genenone
Upstream genePrdm13, Ccnc, 2610029I01Rik, Usp45, 4930528A17Rik, 5730406M06Rik, Coq3, 6230409E13Rik, LOC100040379, Fbxl4, Pou3f2, LOC664911
Downstream gene1700025O08Rik, LOC625462, LOC383998, LOC100040464
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308E18.bB6Ng01-308E18.g
ACCGA100835GA100836
length1,1201,157
definitionB6Ng01-308E18.b B6Ng01-308E18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatttccaccagaatgtaagggctcccttctcttctcatcctc
atcctcatatagtgtttcctaatagattgaaattctgttagaatgttgag
gaaaaaacctcaatgtcgttttaatttataattctttaatgtatagagaa
aaacctgaattttcttcatccaatggcgagaagtgggcctttgctcctac
cttcttttatacatatgagatttgttttgattggcttgagcttgtggagg
tcttgcaaatgtcatagtaactataagctcatatgtgaagttaggaaatc
gttattccttgaagttaaccagcacctctaactcttagaggtttttgttc
ttgttgttgttcactctttcttagaatcctcaaccttcgtatcagaattc
tcctgtccaatcactttaagtattaatacaacaaggagtctgtgattgga
tagggaaaagggaggtggagcgaagagtttcagagacaaagacagaggag
aaaggaggagaagaaggaaggaagatggagcaggaagaagaagaagaccc
agattctgcgtggctttaaagagccacagatagatacataatataataag
aggactgaataattgggatagcttgtctaatctaggcgggcagcttgtat
cattaccacttggctctgaattattgtgtgtgcagatgcataaattgcta
gatttccccccataatgtagtctacctctttgcttagatgatgttcttct
tgtgcagaagttcattgaggtcctattcattaattggtgttaatggtgct
atcaaaattttattcagttgtgagagtagccaaccatgtctaatttaatt
taaagcccattccatgagaagaaattcatacctagagactagataaacaa
gagactatagacctagaggaccaaagaatagatagacaaaaccgggtaaa
ccaatattactgacctaaaataatgtaccattaaatgacccctaatgatt
attctggacattttattgatgccttaacagtcagtgtcataagaggcttc
ttctgtcagagatgcaaaaagacgcagcgacttccaggcagaacattaca
tgacaagagaagttcgaaat
gaattcccctgtactggagcatataaagtttgcaagaccactgggcttct
cttcccaatgatgggtgaataggccatcttctgctacatatgcagctaaa
gacatgagtactctagggggtactgattagttcatattgttgttccacct
atagggttgcaaaccccttcagctccttgggtactttctctagctcctcc
actggggaccctgtgttcatcctatagatgattgtgagcattcacttctg
aatttgccaggcactggcatagcctcacaagagacagctatatcagggtc
ctttcagcaaaatcttgctgtcatatgcaatagtgtctgtttggtggctg
attatgggatggatccctgagtggggcagtcagagatagtccattctttc
atcttagatccaaactttgtctctgtaactccttccatgggtattttgtt
ccctattttagggaggaatgaagtatccatgctttggtcttccttcttga
ttttcttgtgttttgcaaattgtatcttgggcattctaggtttcgggtat
ccacttatcagtgagtgcatatcaagtgacttcttttgtgattgggttac
ctcactcaggatgatgccctccagatcctccactatgttcattgcagcct
tatttataatagccagaagctggaaagaacccagatgtccctcaacagag
gaatgaatacagaaaatgtgatacatttacacaatggagaactactcagc
tattaaaaacaatgaatttatgaaattcttaggcaaatggatgtattttc
tttattgcttctatttccatttttagatcttgggccattttattcatttc
gttcacttgtttgactgtttatttctttaagtgatttatttgcttcccct
ttaagagcttctatttgtttgactgtcttcctgaatttctttaagaggat
taatatatcccatttaaaggcctctatcatctcaggagtagaatttgaag
gtcagcattctgctcttcagtctgatagatatcaggctcgttagtagaga
ctgattctgacggggtcaatatgccattgacctctgtggatactcgtgga
cttacttgtcaatctgatgtctggtgtagcctggcctaaggggtgtcctc
tgatgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_22599519_22600638
seq2: B6Ng01-308E18.b_45_1164

seq1  GAATTCACATTTCCACCAGAATGTAAGGGCTCCCTTCTCTTCTCATCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATTTCCACCAGAATGTAAGGGCTCCCTTCTCTTCTCATCCTC  50

seq1  ATCCTCATATAGTGTTTCCTAATAGATTGAAATTCTGTTAGAATGTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCATATAGTGTTTCCTAATAGATTGAAATTCTGTTAGAATGTTGAG  100

seq1  GAAAAAACCTCAATGTCGTTTTAATTTATAATTCTTTAATGTATAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAACCTCAATGTCGTTTTAATTTATAATTCTTTAATGTATAGAGAA  150

seq1  AAACCTGAATTTTCTTCATCCAATGGCGAGAAGTGGGCCTTTGCTCCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGAATTTTCTTCATCCAATGGCGAGAAGTGGGCCTTTGCTCCTAC  200

seq1  CTTCTTTTATACATATGAGATTTGTTTTGATTGGCTTGAGCTTGTGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTATACATATGAGATTTGTTTTGATTGGCTTGAGCTTGTGGAGG  250

seq1  TCTTGCAAATGTCATAGTAACTATAAGCTCATATGTGAAGTTAGGAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCAAATGTCATAGTAACTATAAGCTCATATGTGAAGTTAGGAAATC  300

seq1  GTTATTCCTTGAAGTTAACCAGCACCTCTAACTCTTAGAGGTTTTTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCCTTGAAGTTAACCAGCACCTCTAACTCTTAGAGGTTTTTGTTC  350

seq1  TTGTTGTTGTTCACTCTTTCTTAGAATCCTCAACCTTCGTATCAGAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGTTCACTCTTTCTTAGAATCCTCAACCTTCGTATCAGAATTC  400

seq1  TCCTGTCCAATCACTTTAAGTATTAATACAACAAGGAGTCTGTGATTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCCAATCACTTTAAGTATTAATACAACAAGGAGTCTGTGATTGGA  450

seq1  TAGGGAAAAGGGAGGTGGAGCGAAGAGTTTCAGAGACAAAGACAGAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAAAGGGAGGTGGAGCGAAGAGTTTCAGAGACAAAGACAGAGGAG  500

seq1  AAAGGAGGAGAAGAAGGAAGGAAGATGGAGCAGGAAGAAGAAGAAGACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGGAGAAGAAGGAAGGAAGATGGAGCAGGAAGAAGAAGAAGACCC  550

seq1  AGATTCTGCGTGGCTTTAAAGAGCCACAGATAGATACATAATATAATAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTGCGTGGCTTTAAAGAGCCACAGATAGATACATAATATAATAAG  600

seq1  AGGACTGAATAATTGGGATAGCTTGTCTAATCTAGGCGGGCAGCTTGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGAATAATTGGGATAGCTTGTCTAATCTAGGCGGGCAGCTTGTAT  650

seq1  CATTACCACTTGGCTCTGAAATTATTGTGTGTGCAGATGCATAAATTGCT  700
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CATTACCACTTGGCTCTG-AATTATTGTGTGTGCAGATGCATAAATTGCT  699

seq1  AGATTTCCCCCCATAATGTAGTCTACCTCTTTGCTTAGATGATGTTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCCCCCCATAATGTAGTCTACCTCTTTGCTTAGATGATGTTCTTC  749

seq1  TTGTGCAGAAGTTCATTGAGGTCCTATTCATTAATTGGTGTTAATGGTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCAGAAGTTCATTGAGGTCCTATTCATTAATTGGTGTTAATGGTGC  799

seq1  TATCAAAATTTTATTCAGTTGTGAGAGTAGCCAACCATGTCTAATTTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAATTTTATTCAGTTGTGAGAGTAGCCAACCATGTCTAATTTAAT  849

seq1  TTAAAGCCCATTCCATGAGAAGAAATTCATACCTAGAGACTAGATAAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCCCATTCCATGAGAAGAAATTCATACCTAGAGACTAGATAAACA  899

seq1  AGAGACTATAGACCTAGAGGACCAAAGAATAGATAGACAAAACCGGGTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTATAGACCTAGAGGACCAAAGAATAGATAGACAAAACCGGGTAA  949

seq1  AACCAAATATTACTGACCTAAAATAATGTACCAATAAAATGACCCCTAAT  1000
      |  | ||||||||||||||||||||||||||| || ||||||||||||||
seq2  A--CCAATATTACTGACCTAAAATAATGTACC-ATTAAATGACCCCTAAT  996

seq1  GA-TATTCTGGACA-TTTATTGATGCCTTAACCAGTCAGTGTCAT-AGAG  1047
      || ||||||||||| |||||||||||||||| ||||||||||||| ||||
seq2  GATTATTCTGGACATTTTATTGATGCCTTAA-CAGTCAGTGTCATAAGAG  1045

seq1  GCTTCCTCTGTCAGAAGATGCAAAAAGACGCAGCGACTCACAGCCAG-AC  1096
      ||||| |||||||| |||||||||||||||||||||||  ||| ||| ||
seq2  GCTTCTTCTGTCAG-AGATGCAAAAAGACGCAGCGACTTCCAGGCAGAAC  1094

seq1  ATTACATGACAAGAGA--GTCGAAAT  1120
      ||||||||||||||||   |||||||
seq2  ATTACATGACAAGAGAAGTTCGAAAT  1120