BAC Information

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BAC

Clone NameB6Ng01-309N19
Chromosome4 (Build37)
Map Location 7,580,061 - 7,581,199
singlet/doubletsinglet
Overlap genenone
Upstream geneTox, LOC100039421, LOC666700
Downstream geneCar8, LOC100039494, LOC100039505, LOC100039478, Rab2, EG666752
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309N19.bB6Ng01-309N19.g
ACCGA101996GA101997
length1,1371,174
definitionB6Ng01-309N19.b B6Ng01-309N19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttataaatttttttcttaagagggtatttgagccatgcctttat
ctttagttttaagaaaaactgtgcaggagaccgagacaaaagaacccaca
ctatagacctatagaacttttgtacagtgttgcaccaagagaaaactaag
actttattggcactagaacctgataaagcattgccaaatggcctcattct
gtcttgcttatttttttttccttatagtaagtatactttccccagtttag
aattgaggaatgtgtgtagtcctacttgaacattatttgtaagtccttgc
aaatctatcaggaaacagattagtagagaaataaatgaaacttcaaagta
aaaatttaagagaaaaagaagcatataaattctctaacatcctatgagag
gaggaaggaaaccatgcaaataaggagactggggtaaaatggatagagtg
taactgacaacaaacaaacaaacaaaacaaacaaacaaacaacacagcat
caatttgggttttataatcagtgaagctatccctgaggcttgcaggttgt
gattcagctagttcaacaatgcctatttactaccagaaaggtcaagcgtt
caatagttcttgaccagaatccagttcacaaggctggacatctcaactgg
tcctcagtatcccccaaaagtctataatgtcagtgatagaatgggcttga
cagtgagagcgagggcaagcaggcaaaaagcaaaggctatgaccctgatt
tagggtggggggtctggccctaaatgatcctatcaagaaaactctctcac
agatgtgctcagctcaactgcttgagctttagtggcatgtaacaagagaa
aaatatcatgaagcagaaaatactttagacacatatacaaccatatgcac
catatgattcacacagcagtaaacaccatagtcaatgaataattgacaat
tttttctcactcattgaaaatccatagtaagtagcatccataacgtagac
acaataggatatttgatctttctgataatcttggttatgcatccacagaa
ttaaaattattcgaacctagagaagtttgcttcgtggttagaaggacttg
ttgctctttgcagaatgacctgactcttgattattag
gaattctcacactagcaacttaacagcacatcagaaactctagaacaaat
agaagcaaatgtacccaagagcatggatggcagaaaacaatcaaactgag
ggctgaaatcaataaaatagaaagaaagagtgagagagagagagagagag
agagagagagagagaaatacaaagaatcaatacaagaaagaattggagaa
aaatcagtaaaatagaaaagcctttatctttattaagtaaaaggcaaaga
gaatatccaaatcaacaaaaccagtaacaaaaagcagtacatagcaacca
aaagcaaggaaatccaatgaactataaagtcatatttcaaaaacctatac
tccaaaaaactggaaaatttaaaacaaatggagaattttctcgatagatg
ccacataccaaagttaaatcaagatcatgtaaacaacttaaattggtcta
tttaatccctcagaaaatagaaatagttattcaaagactcccaaacagaa
aaagcccagaggcatagttttagtgaagaattctatgagactttgaaaga
agacctaaggccaatactccttaaattattccacaaaatagaaacagaaa
aaacattgccaaatttatatgaagtcagatttaccctgatatccaaacaa
catgaagatttctcaaagagaattatataccaatcatcaacttgatgcaa
atgtattcaataaaatgcttgaaatctgaatataagaacacatcaaaagg
aacatccactatgatcaaacaggcttcattccagaaatgcagggatggat
cagcacacaaaatttgtcaacataatttaccatataaataatataaaaga
agaaaaacccagatgattataccattagatgctcaaacaacatttaacaa
agcccaaaccctttcatgacaaatgccttgggagagatcagggatacaag
ggacaaacctaaacataataaaggcaattcaaagtaagtctatagccaca
tcaaattaaatggaggagaaggtttaaatcattcactaaaacaggaggga
caagggtgtcagtcttcataatcctattcatatattactcggacgttaag
ctagagcaataggacagctaatggatagtagggtggactccaattagaaa
gcccaagaaaattccaatagagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_7580061_7581199
seq2: B6Ng01-309N19.b_47_1183

seq1  GAATTCTTATAAATTTTTTTCTTAAGAGGGTATTTGAGCCATGCCTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATAAATTTTTTTCTTAAGAGGGTATTTGAGCCATGCCTTTAT  50

seq1  CTTTAGTTTTAAGAAAAACTGTGCAGGAGACCGAGACAAAAGAACCCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTTTTAAGAAAAACTGTGCAGGAGACCGAGACAAAAGAACCCACA  100

seq1  CTATAGACCTATAGAACTTTTGTACAGTGTTGCACCAAGAGAAAACTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGACCTATAGAACTTTTGTACAGTGTTGCACCAAGAGAAAACTAAG  150

seq1  ACTTTATTGGCACTAGAACCTGATAAAGCATTGCCAAATGGCCTCATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTGGCACTAGAACCTGATAAAGCATTGCCAAATGGCCTCATTCT  200

seq1  GTCTTGCTTATTTTTTTTTCCTTATAGTAAGTATACTTTCCCCAGTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGCTTATTTTTTTTTCCTTATAGTAAGTATACTTTCCCCAGTTTAG  250

seq1  AATTGAGGAATGTGTGTAGTCCTACTTGAACATTATTTGTAAGTCCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGGAATGTGTGTAGTCCTACTTGAACATTATTTGTAAGTCCTTGC  300

seq1  AAATCTATCAGGAAACAGATTAGTAGAGAAATAAATGAAACTTCAAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATCAGGAAACAGATTAGTAGAGAAATAAATGAAACTTCAAAGTA  350

seq1  AAAATTTAAGAGAAAAAGAAGCATATAAATTCTCTAACATCCTATGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAAGAGAAAAAGAAGCATATAAATTCTCTAACATCCTATGAGAG  400

seq1  GAGGAAGGAAACCATGCAAATAAGGAGACTGGGGTAAAATGGATAGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGAAACCATGCAAATAAGGAGACTGGGGTAAAATGGATAGAGTG  450

seq1  TAACTGACAACAAACAAACAAACAAAACAAACAAACAAACAACACAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGACAACAAACAAACAAACAAAACAAACAAACAAACAACACAGCAT  500

seq1  CAATTTGGGTTTTATAATCAGTGAAGCTATCCCTGAGGCTTGCAGGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGGGTTTTATAATCAGTGAAGCTATCCCTGAGGCTTGCAGGTTGT  550

seq1  GATTCAGCTAGTTCAACAATGCCTATTTACTACCAGAAAGGTCAAGCGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGCTAGTTCAACAATGCCTATTTACTACCAGAAAGGTCAAGCGTT  600

seq1  CAATAGTTCTTGACCAGAATCCAGTTCACAAGGCTGGACATCTCAACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTTCTTGACCAGAATCCAGTTCACAAGGCTGGACATCTCAACTGG  650

seq1  TCCTCAGTATCCCCCAAAAGTCTATAATGTCAGTGATAGAATGGGCTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGTATCCCCCAAAAGTCTATAATGTCAGTGATAGAATGGGCTTGA  700

seq1  CAGTGAGAGCGAGGGCAAGCAGGCAAAAAGCAAAGGCTATGACCCTGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGAGCGAGGGCAAGCAGGCAAAAAGCAAAGGCTATGACCCTGATT  750

seq1  TAGGGTGGGGGGTCTGGCCCTAAATGATCCTATCAAGAAAACTCTCTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTGGGGGGTCTGGCCCTAAATGATCCTATCAAGAAAACTCTCTCAC  800

seq1  AGATGTGCTCAGCTCAACTGCTTGAGCTTTAGTGGCATGTAACAAGAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGCTCAGCTCAACTGCTTGAGCTTTAGTGGCATGTAACAAGAGAA  850

seq1  AAATATCATGAAGCAGAAAATACTTTAGACACATATACAACCATATGCAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAATATCATGAAGCAGAAAATACTTTAGACACATATACAACCATATGC-A  899

seq1  CCATATGATTCACACAGCAGTAAACACCATAGTCAATGAATAATTGACA-  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCATATGATTCACACAGCAGTAAACACCATAGTCAATGAATAATTGACAA  949

seq1  -TTTTTCTCACTCATTGAAAATCCATAGTAAGTAGCATCCATAAACGTAG  998
       ||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTTTTCTCACTCATTGAAAATCCATAGTAAGTAGCATCCAT-AACGTAG  998

seq1  ACACAAAATAAGATAATTTGAATCTTTCTGATAATTCTTGGTTATGCAT-  1047
      ||||  |||| ||| ||||| ||||||||||||| |||||||||||||| 
seq2  ACAC--AATAGGAT-ATTTG-ATCTTTCTGATAA-TCTTGGTTATGCATC  1043

seq1  CACAGATTAAAAATTAATTCGAAACCTAGAG-AGTTGGCTCCGTGGTTAA  1096
      |||||| | |||||| ||||| ||||||||| |||| ||| |||||||| 
seq2  CACAGAATTAAAATT-ATTCG-AACCTAGAGAAGTTTGCTTCGTGGTTAG  1091

seq1  GAGGACTTGGTGCTC-TTGCAG-ATGACCTGACT-TTGATTATTAG  1139
       |||||||| ||||| |||||| ||||||||||| |||||||||||
seq2  AAGGACTTGTTGCTCTTTGCAGAATGACCTGACTCTTGATTATTAG  1137