BAC Information

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BAC

Clone NameB6Ng01-312B05
Chromosome4 (Build37)
Map Location 16,217,080 - 16,351,211
singlet/doubletdoublet
Overlap geneLOC383994
Upstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150
Downstream geneLOC100040154, LOC667212, LOC100040173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312B05.bB6Ng01-312B05.g
ACCGA103634GA103635
length4321,043
definitionB6Ng01-312B05.b B6Ng01-312B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,350,774 - 16,351,211)(16,217,080 - 16,218,123)
sequence
tttgtttagctctgagccccattttttaatggggttatttgattttctgg
agtctaccttcttgagttctttatatatattggatattagtcccctatct
gatttaggattggtaaagaccctttcccaatctgttggtggcctttttgt
cttattgacagtgtcttttgggaggctacaccattcttatctaatcttca
ttacctacacccaaaaactaaccagtaccccccccccagagctccctgga
actaaaccaccaaccaaagaacacacctggtggcactcatggctctagtt
gcatatgtagcagaggatggaatcaataggaggagaggcccttggtcctg
cgaaggttctatgccccattgtaagtgaatgccaggaccaggaagcagag
tgggtcggttggggagcaggggaggggggagg

gaattctatttcacaatgcaaaatatctggtgtgactcataggttaaacc
tactattcataaaatttgttgaaaaggtgggcatgtctttgatggttaaa
attacaaaagtttttcaagaatccatagaccacgaaatacttttacagta
ttaaacatacgaataaaaatggtccacggaaatactaaaaatggcgaatg
tggaattacacgatagtacagtttttttcttttttccatgcttatattag
caaacccacttataaggagctgcatggataatgtttgtagttgaaatgca
tttttataaaaatatgctcagtcaaagcccacagattaaaccttgcaaac
tcgtattttagtaagatgtatgatcagaagacataaatattatgttgcag
aactgatgcatatgcatctcatttggttagtggcttccaggggattcatt
cttggaggtgagccttttttttttgtttgtttggttgtttgtttttgttt
taaaagacagtgtgcatttctgtgtgtgtgtgtttgtatgtgcatgttct
tgtgtgtgatggtaggtcatgcattctgatatgtttatgtgtagtaagaa
caacctttgagaattcatctgtatctttcttcattgtttgagacatggtc
tctctgtcaggtttttgctttaattttttagattataatataattacatc
attttcttccctttcctccttctaagctctcccatgcaatggttcttact
gtcttttaaattgatggattattttttttcttcattgttgttacattaaa
tgctatatatattcctaagcataacttactccgtctgagaaatgttactt
tatgtatgcttctgtggtaaccatttggtacgggataaccaattggtatg
cccttcctttggtaaggctctttctatagcattccttagttacctatagt
tttttttgtacacagttatggtcttgagttttcccctcattaactttggc
atgcatatttttgtcattgttactcatgtttagagagtcatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16350774_16351211
seq2: B6Ng01-312B05.b_47_484 (reverse)

seq1  CCTCCCCCCTCCCCTGCTCCCCAACCGACCCACTCTGCTTCCTGGTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCCTCCCCTGCTCCCCAACCGACCCACTCTGCTTCCTGGTCCTG  50

seq1  GCATTCACTTACAATGGGGCATAGAACCTTCGCAGGACCAAGGGCCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCACTTACAATGGGGCATAGAACCTTCGCAGGACCAAGGGCCTCTC  100

seq1  CTCCTATTGATTCCATCCTCTGCTACATATGCAACTAGAGCCATGAGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTATTGATTCCATCCTCTGCTACATATGCAACTAGAGCCATGAGTGC  150

seq1  CACCAGGTGTGTTCTTTGGTTGGTGGTTTAGTTCCAGGGAGCTCTGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGTGTGTTCTTTGGTTGGTGGTTTAGTTCCAGGGAGCTCTGGGGG  200

seq1  GGGGGTACTGGTTAGTTTTTGGGTGTAGGTAATGAAGATTAGATAAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTACTGGTTAGTTTTTGGGTGTAGGTAATGAAGATTAGATAAGAAT  250

seq1  GGTGTAGCCTCCCAAAAGACACTGTCAATAAGACAAAAAGGCCACCAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGCCTCCCAAAAGACACTGTCAATAAGACAAAAAGGCCACCAACA  300

seq1  GATTGGGAAAGGGTCTTTACCAATCCTAAATCAGATAGGGGACTAATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGAAAGGGTCTTTACCAATCCTAAATCAGATAGGGGACTAATATC  350

seq1  CAATATATATAAAGAACTCAAGAAGGTAGACTCCAGAAAATCAAATAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATATAAAGAACTCAAGAAGGTAGACTCCAGAAAATCAAATAACC  400

seq1  CCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATTC  438
      ||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAAAAATGGGGCTCAGAGCTAAACAAAGAATTC  438


seq1: chr4_16217080_16218123
seq2: B6Ng01-312B05.g_66_1108

seq1  GAATTCTATTTCACAATGCAAAATATCTGGTGTGACTCATAGGTTAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTCACAATGCAAAATATCTGGTGTGACTCATAGGTTAAACC  50

seq1  TACTATTCATAAAATTTGTTGAAAAGGTGGGCATGTCTTTGATGGTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTCATAAAATTTGTTGAAAAGGTGGGCATGTCTTTGATGGTTAAA  100

seq1  ATTACAAAAGTTTTTCAAGAATCCATAGACCACGAAATACTTTTACAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAAAGTTTTTCAAGAATCCATAGACCACGAAATACTTTTACAGTA  150

seq1  TTAAACATACGAATAAAAATGGTCCACGGAAATACTAAAAATGGCGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACATACGAATAAAAATGGTCCACGGAAATACTAAAAATGGCGAATG  200

seq1  TGGAATTACACGATAGTACAGTTTTTTTCTTTTTTCCATGCTTATATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTACACGATAGTACAGTTTTTTTCTTTTTTCCATGCTTATATTAG  250

seq1  CAAACCCACTTATAAGGAGCTGCATGGATAATGTTTGTAGTTGAAATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCACTTATAAGGAGCTGCATGGATAATGTTTGTAGTTGAAATGCA  300

seq1  TTTTTATAAAAATATGCTCAGTCAAAGCCCACAGATTAAACCTTGCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAAAAATATGCTCAGTCAAAGCCCACAGATTAAACCTTGCAAAC  350

seq1  TCGTATTTTAGTAAGATGTATGATCAGAAGACATAAATATTATGTTGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTATTTTAGTAAGATGTATGATCAGAAGACATAAATATTATGTTGCAG  400

seq1  AACTGATGCATATGCATCTCATTTGGTTAGTGGCTTCCAGGGGATTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATGCATATGCATCTCATTTGGTTAGTGGCTTCCAGGGGATTCATT  450

seq1  CTTGGAGGTGAGCCTTTTTTTTTTGTTTGTTTGGTTGTTTGTTTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGGTGAGCCTTTTTTTTTTGTTTGTTTGGTTGTTTGTTTTTGTTT  500

seq1  TAAAAGACAGTGTGCATTTCTGTGTGTGTGTGTTTGTATGTGCATGTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGACAGTGTGCATTTCTGTGTGTGTGTGTTTGTATGTGCATGTTCT  550

seq1  TGTGTGTGATGGTAGGTCATGCATTCTGATATGTTTATGTGTAGTAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGATGGTAGGTCATGCATTCTGATATGTTTATGTGTAGTAAGAA  600

seq1  CAACCTTTGAGAATTCATCTGTATCTTTCTTCATTGTTTGAGACATGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTTGAGAATTCATCTGTATCTTTCTTCATTGTTTGAGACATGGTC  650

seq1  TCTCTGTCAGGTTTTTGCTTTAATTTTTTAGATTATAATATAATTACATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCAGGTTTTTGCTTTAATTTTTTAGATTATAATATAATTACATC  700

seq1  ATTTTCTTCCCTTTCCTCCTTCTAAGCTCTCCCATGCAATGGTTCTTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTCCCTTTCCTCCTTCTAAGCTCTCCCATGCAATGGTTCTTACT  750

seq1  GTCTTTTAAATTGATGGATTA-TTTTTTTCTTCATTGTTGTTACATTAAA  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTCTTTTAAATTGATGGATTATTTTTTTTCTTCATTGTTGTTACATTAAA  800

seq1  TGCTATATATATTCCTAAGCATAACTTACTCCGTCTGAGAAATGTTACTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATATATTCCTAAGCATAACTTACTCCGTCTGAGAAATGTTACTT  850

seq1  TATGTATGCTTCTGTGGTAACCATTTGGTACGGGATAACCAATTGGTATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGCTTCTGTGGTAACCATTTGGTACGGGATAACCAATTGGTATG  900

seq1  CCCTTCCTTTGGTAAGGCTCTTTCTATAGCATTCCTTAGTTACCTATAG-  948
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCCTTCCTTTGGTAAGGCTCTTTCTATAGCATTCCTTAGTTACCTATAGT  950

seq1  TTTTTTTGTACACAGTTATGGTCTTGAAGTTTTCCCCTCATTAACTTTGG  998
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTTTTTGTACACAGTTATGGTCTTG-AGTTTTCCCCTCATTAACTTTGG  999

seq1  CATGCATATTTTTGTCATTGTTTACCTCATGTTTAGAGAGTCATAT  1044
      ||||||||||||||||||||||   |||||||||||||||||||||
seq2  CATGCATATTTTTGTCATTGTT--ACTCATGTTTAGAGAGTCATAT  1043


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