BAC Information

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BAC

Clone NameB6Ng01-314L04
Chromosome4 (Build37)
Map Location 73,010,093 - 73,118,740
singlet/doubletdoublet
Overlap geneOTTMUSG00000001246, LOC100039726, LOC667722
Upstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698
Downstream geneLOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774, Jmjd2c, LOC100040258
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314L04.bB6Ng01-314L04.g
ACCGA105555GA105556
length1,1181,077
definitionB6Ng01-314L04.b B6Ng01-314L04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,117,621 - 73,118,740)(73,010,093 - 73,011,156)
sequence
gaattccagtgctgtggcacaacttgaaaggttcagaggttaattacttt
atcatgggctaggttttgaccctcagaaacagccagtttggacacacatc
cacagtcacaacaaacatattatgacaatcgattaaaaaccattttgaat
ctatttacttaacaagtaaatagcatctaccaattcagatgctaagaata
ttatcacatagtatctcaagtctatggaaatcttcctccatttcactgta
catgcccttttgatggacccaccaatgcattttaaatttgacttggccta
tgacatactctgttctgtaaagctctcaaagcaaacatgaggtcatactg
ctaaccctgaagtctttcttaattcttcctgggcctgacctgtacaccat
ctatttaattctcttggctgttctaattttctaattttaattcttcttgt
agatacttaattctctttttctttgagaatacagtcccatggctatgtgc
tctaaggtgatctaatatatatatatatagcagaggacatgttcctttgc
aatattcctatctagtactgggtcccataccctaatcttacaagatctcc
aatccaggtaaaaaatccaggaccccatctgtctgtctttaaaaaatcct
catttagcctgtttgtacaactcctagggggctgccaccattgtccctga
gcccaaggaacccactgctgactttctgggaaatatctgtatgctcttcc
agcctcagttttataataaaaatgtcctgtttttattatacagagttgag
actcagacaggggggaatagctgcagatttaggcatttttgcccatggct
ctcagttactttcatttttcacctcgagagagtgattgtaacatatcaaa
ctttcccaagatgttgtaactgtcaccatatccaattttacattaggtgc
aaattccccaaatttgtagagcttcctctacagttacatttattcttgaa
tctatgagcagctttcattttaatgggtatctgtaacatctagttcctgg
atatcaagcagcctcctactaggtcttgccagtcaaattccagtttatca
aggaggagtaaagaaatg
gaattcatctatcaagagctataacatggttttcatgctgacatttcttc
ttcatctctactcttgtacatctttgttattctctgattctctgaataaa
cagacatggaggaggttggaacaaaacttaaatgaagattctttgccttt
ctataattccaagtagctttgaagaaaggttgcttgtaagaaaaggatgc
tgataaaaaaaaaatctagcaaatagaaaacactatactgtgcctacctt
ctgcagttatatgtcaacttatttcacattctcaccatagaatattgtct
accaggtgtagacagtaagtacataatcattgaagtcatcttattactat
gtttcggtagtagaacattagtaattgtttttctgcaaggttcctaggtt
atccaccttcaggtcatttgtcagatgagtagtgacaattatgagtttcg
tctcatggatggttcttaagtacaatcaggtactgttggtttacttctta
aggctctgttccaccatggcactagcatatctaacacagaggacacattg
caaactgaaggatttgtagcaggtctagtgtttctatttcctcttcagca
ccatggagaggagtgccttctgctattaagaatactagtcaatggagata
ggatggcacctgagtaacttctactttatgtgactgtatatcaagaattg
ctgtgagatcttgcatggaacttttagaaaatataggaatggattcttca
acttcacagcttttctttgaaaaatacttgtttccatcttgttactagta
agagacatatttaaattatatctttttttgggaatgtaaagtcattttta
ttctttaatttttaagtttatttatttttattgtttattttaattcattt
tcatttcagatgttgtcttagttagggttttactgctgtgaatagacacc
atgaccaaggcaagtctttaataaaaaaagcaacatttaatttggggctg
ggcttacagggttcaggaggtttcagttccattatcatcaaaggtgggag
cacggcagttatccagcaggcatagcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_73117621_73118740
seq2: B6Ng01-314L04.b_42_1159 (reverse)

seq1  CATTTCTTTCCTCCTTCCTTGATTAAACTGGAATTTTGACCTGGCAAGAC  50
      ||||||||| |||| ||||||| |||||||||| ||||| ||||||||||
seq2  CATTTCTTTACTCC-TCCTTGA-TAAACTGGAA-TTTGA-CTGGCAAGAC  46

seq1  CTAGTAGGAGCCTGCTTGATATCCAGGAACTAGATGTTACAGATA-CCAT  99
      |||||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  CTAGTAGGAGGCTGCTTGATATCCAGGAACTAGATGTTACAGATACCCAT  96

seq1  TAAAATGAAAGCTGCTCATAGATTCAAG-ATAAATGTAACTGTAGAGGAA  148
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAAAATGAAAGCTGCTCATAGATTCAAGAATAAATGTAACTGTAGAGGAA  146

seq1  GCTCTACAAATTTGGGGAATTTGCACCTAATGTAAAATTGGATATGGTGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACAAATTTGGGGAATTTGCACCTAATGTAAAATTGGATATGGTGA  196

seq1  CAGTTACAACATCTTGGGAAAGTTTGATATGTTACAATCACTCTCTCGAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACAACATCTTGGGAAAGTTTGATATGTTACAATCACTCTCTCGAG  246

seq1  GTGAAAAATGAAAGTAACTGAGAGCCATGGGCAAAAATGCCTAAATCTGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAATGAAAGTAACTGAGAGCCATGGGCAAAAATGCCTAAATCTGC  296

seq1  AGCTATTCCCCCCTGTCTGAGTCTCAACTCTGTATAATAAAAACAGGACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTCCCCCCTGTCTGAGTCTCAACTCTGTATAATAAAAACAGGACA  346

seq1  TTTTTATTATAAAACTGAGGCTGGAAGAGCATACAGATATTTCCCAGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTATAAAACTGAGGCTGGAAGAGCATACAGATATTTCCCAGAAA  396

seq1  GTCAGCAGTGGGTTCCTTGGGCTCAGGGACAATGGTGGCAGCCCCCTAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCAGTGGGTTCCTTGGGCTCAGGGACAATGGTGGCAGCCCCCTAGG  446

seq1  AGTTGTACAAACAGGCTAAATGAGGATTTTTTAAAGACAGACAGATGGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTACAAACAGGCTAAATGAGGATTTTTTAAAGACAGACAGATGGGG  496

seq1  TCCTGGATTTTTTACCTGGATTGGAGATCTTGTAAGATTAGGGTATGGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATTTTTTACCTGGATTGGAGATCTTGTAAGATTAGGGTATGGGA  546

seq1  CCCAGTACTAGATAGGAATATTGCAAAGGAACATGTCCTCTGCTATATAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTACTAGATAGGAATATTGCAAAGGAACATGTCCTCTGCTATATAT  596

seq1  ATATATATTAGATCACCTTAGAGCACATAGCCATGGGACTGTATTCTCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTAGATCACCTTAGAGCACATAGCCATGGGACTGTATTCTCAA  646

seq1  AGAAAAAGAGAATTAAGTATCTACAAGAAGAATTAAAATTAGAAAATTAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGAGAATTAAGTATCTACAAGAAGAATTAAAATTAGAAAATTAG  696

seq1  AACAGCCAAGAGAATTAAATAGATGGTGTACAGGTCAGGCCCAGGAAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCAAGAGAATTAAATAGATGGTGTACAGGTCAGGCCCAGGAAGAA  746

seq1  TTAAGAAAGACTTCAGGGTTAGCAGTATGACCTCATGTTTGCTTTGAGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAAGACTTCAGGGTTAGCAGTATGACCTCATGTTTGCTTTGAGAG  796

seq1  CTTTACAGAACAGAGTATGTCATAGGCCAAGTCAAATTTAAAATGCATTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAGAACAGAGTATGTCATAGGCCAAGTCAAATTTAAAATGCATTG  846

seq1  GTGGGTCCATCAAAAGGGCATGTACAGTGAAATGGAGGAAGATTTCCATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTCCATCAAAAGGGCATGTACAGTGAAATGGAGGAAGATTTCCATA  896

seq1  GACTTGAGATACTATGTGATAATATTCTTAGCATCTGAATTGGTAGATGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAGATACTATGTGATAATATTCTTAGCATCTGAATTGGTAGATGC  946

seq1  TATTTACTTGTTAAGTAAATAGATTCAAAATGGTTTTTAATCGATTGTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTTGTTAAGTAAATAGATTCAAAATGGTTTTTAATCGATTGTCA  996

seq1  TAATATGTTTGTTGTGACTGTGGATGTGTGTCCAAACTGGCTGTTTCTGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGTTTGTTGTGACTGTGGATGTGTGTCCAAACTGGCTGTTTCTGA  1046

seq1  GGGTCAAAACCTAGCCCATGATAAAGTAATTAACCTCTGAACCTTTCAAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAAAACCTAGCCCATGATAAAGTAATTAACCTCTGAACCTTTCAAG  1096

seq1  TTGTGCCACAGCACTGGAATTC  1120
      ||||||||||||||||||||||
seq2  TTGTGCCACAGCACTGGAATTC  1118

seq1: chr4_73010093_73011156
seq2: B6Ng01-314L04.g_69_1145

seq1  GAATTCATCTATCAAGAGCTATAACATGGTTTTCATGCTGACATTTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTATCAAGAGCTATAACATGGTTTTCATGCTGACATTTCTTC  50

seq1  TTCATCTCTACTCTTGTACATCTTTGTTATTCTCTGATTCTCTGAATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCTACTCTTGTACATCTTTGTTATTCTCTGATTCTCTGAATAAA  100

seq1  CAGACATGGAGGAGGTTGGAACAAAACTTAAATGAAGATTCTTTGCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATGGAGGAGGTTGGAACAAAACTTAAATGAAGATTCTTTGCCTTT  150

seq1  CTATAATTCCAAGTAGCTTTGAAGAAAGGTTGCTTGTAAGAAAAGGATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATTCCAAGTAGCTTTGAAGAAAGGTTGCTTGTAAGAAAAGGATGC  200

seq1  TGATAAAAAAAAAATCTAGCAAATAGAAAACACTATACTGTGCCTACCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAAAAAAAATCTAGCAAATAGAAAACACTATACTGTGCCTACCTT  250

seq1  CTGCAGTTATATGTCAACTTATTTCACATTCTCACCATAGAATATTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTTATATGTCAACTTATTTCACATTCTCACCATAGAATATTGTCT  300

seq1  ACCAGGTGTAGACAGTAAGTACATAATCATTGAAGTCATCTTATTACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTGTAGACAGTAAGTACATAATCATTGAAGTCATCTTATTACTAT  350

seq1  GTTTCGGTAGTAGAACATTAGTAATTGTTTTTCTGCAAGGTTCCTAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCGGTAGTAGAACATTAGTAATTGTTTTTCTGCAAGGTTCCTAGGTT  400

seq1  ATCCACCTTCAGGTCATTTGTCAGATGAGTAGTGACAATTATGAGTTTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCTTCAGGTCATTTGTCAGATGAGTAGTGACAATTATGAGTTTCG  450

seq1  TCTCATGGATGGTTCTTAAGTACAATCAGGTACTGTTGGTTTACTTCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGGATGGTTCTTAAGTACAATCAGGTACTGTTGGTTTACTTCTTA  500

seq1  AGGCTCTGTTCCACCATGGCACTAGCATATCTAACACAGAGGACACATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTGTTCCACCATGGCACTAGCATATCTAACACAGAGGACACATTG  550

seq1  CAAACTGAAGGATTTGTAGCAGGTCTAGTGTTTCTATTTCCTCTTCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGAAGGATTTGTAGCAGGTCTAGTGTTTCTATTTCCTCTTCAGCA  600

seq1  CCATGGAGAGGAGTGCCTTCTGCTATTAAGAATACTAGTCAATGGAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAGAGGAGTGCCTTCTGCTATTAAGAATACTAGTCAATGGAGATA  650

seq1  GGATGGCACCTGAGTAACTTCTACTTTATGTGACTGTATATCAAGAATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCACCTGAGTAACTTCTACTTTATGTGACTGTATATCAAGAATTG  700

seq1  CTGTGAGATCTTGCATGGAACTTTTAGAAAATATAGGAATGGATTCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGATCTTGCATGGAACTTTTAGAAAATATAGGAATGGATTCTTCA  750

seq1  ACTTCACAGCTTTTCTTTGAAAAATACTTGTTTCCATCTTGTTACTAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACAGCTTTTCTTTGAAAAATACTTGTTTCCATCTTGTTACTAGTA  800

seq1  AGAGACATATTTAAATTATATC-TTTTTTGGGAATGTAAAGTCATTTTTA  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGAGACATATTTAAATTATATCTTTTTTTGGGAATGTAAAGTCATTTTTA  850

seq1  TTCTTTAATTTTTAAGTTTATTTATTTTTATTGTTTATTTT-ATTCATTT  898
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCTTTAATTTTTAAGTTTATTTATTTTTATTGTTTATTTTAATTCATTT  900

seq1  TCATTTCAGATGTTGTCTTAGTTAGGGTTTTACTGCTGTGAATAGACACC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCAGATGTTGTCTTAGTTAGGGTTTTACTGCTGTGAATAGACACC  950

seq1  ATGACCAAGGCAAGTCT----TATAAAAAGCAACATTTAA-TTGGGGCT-  992
      |||||||||||||||||    || |||||||||||||||| |||||||| 
seq2  ATGACCAAGGCAAGTCTTTAATAAAAAAAGCAACATTTAATTTGGGGCTG  1000

seq1  GGCTTACA-GGTTCA-GAGG-TTCAG-TCCATTATCATC-AAGGTGGGAG  1037
      |||||||| |||||| |||| ||||| |||||||||||| ||||||||||
seq2  GGCTTACAGGGTTCAGGAGGTTTCAGTTCCATTATCATCAAAGGTGGGAG  1050

seq1  CACGGCAG-TATCCAGGCAGGCATAGCG  1064
      |||||||| |||||| ||||||||||||
seq2  CACGGCAGTTATCCA-GCAGGCATAGCG  1077