BAC Information

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BAC

Clone NameB6Ng01-317I03
Chromosome4 (Build37)
Map Location 28,120,043 - 28,120,947
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040691, Tpm3-rs2, LOC100040842
Downstream geneLOC100040735, LOC230044, LOC665141, LOC100040773, Epha7, LOC100040907
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317I03.bB6Ng01-317I03.g
ACCGA107633GA107634
length1,216901
definitionB6Ng01-317I03.b B6Ng01-317I03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgggaaaaaaattgaaaaaaa
atattcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctga
gattccatcttacacccgtcagaatggctaagatcaaaaattcagttgat
agcagatgctgacgaggatgtggagaaagaggaacactcctctattgttg
gtgggattgcaagcttgaacaaccactctggaaatcagtctggcagtttc
tcagaaaattggacatggtacgactggaagatcccgcaataccactcctg
ggaatatatccagaagatgttccaactagtaagaaagaaacatgttccac
tatgttcatagcagccttatttataatagccagaagctggaaaggaccca
gatgcccatcaacagaggaatggatacaaaaattgtggtacatttacaca
atggagtactattcagctattaaaaagaatgaatttatgaaattcctagt
caaatggttggacctggagggcattatcctgagtgagttaacccaatcac
aaaagaacagaaatgatatgttctcactgataagtagatattagctcaga
aacttagaatacccaagatacaagatacaatttgcaaaacacatgaaact
caagaagaacaaagaccaaagtgtggacactttgccccttcttagaattg
ggaacaatggagtactactcagctattaaaaagaatgaatttatgaaatt
cctagccaaatggatagacctggagggcatcatcctgagtgaggtaacac
attcacaaaggaactcacacaatatgtactcactgataagaggatattag
ccccaaacctaggatacccaagatataagataaaatttgctaaacacatg
aaactcaagaagaatgaagactgaagtgtggactctatgcccctccttag
aattggaacaaaacacccatggaaggagttacagagacaagtttggagtg
agatgaaagatgtcatgtagagactgcatatcaggatccaccccatatca
gcatcaacgctgacacatgcatacgtagcaagatttattgaaagaacaga
tgtagctgttctcttatgagaactatggctgggcctagcaaacaaactga
tgatccagtcactatgatgatcatgctcaatggaggactaggaaagatag
cccaaggagcctctaa
gaattctttcttcctacatattctttaattacgtgaggcctacacgggca
gcaattttcatatattttatgaggttggaataaatactgacaattgtctt
tgaatagaataattcagtagaaccttttgccatgctgccatagtttgtaa
acaagacacttaactggtgactaatggctacttgtgactattgaaaatgc
gcaaagtctagtaaaactgagcactgaattatagattttatttaaataaa
cagtgaattccacttgtaaaaaacgtaggtatagatggtcatctatcgct
agactattgtttgcagctgtacaaaacacagtgacaagctaaaacttctc
cagcaacacagcaatttacaaaggttcatattctatacaacttttcaaat
ttcatacttgtatttcatagagatcccgctatttagatttacttatattc
attatgttgacatgcagcttcttcattaaaggagtaccacaaataccttc
ctactttcttaaatttattctattatttattatcctaaaagagtattaaa
aaaaaaaaaacaaaaacaaaaaacagtgcaccaaaatgttatttccttag
cttggtgaaaagagttaactgggtttcattcagtccatgagcttttttgt
acttaacaagtattgtttacatttaatttatagtcatctattggatggaa
cacagggcctccaatgaagaagctagagaacgtactcaaggagctaatgg
ggtctggaaccctataggaggaaaaacaatatgaactaaccagtacctca
agagcttgtgtctctagttgcatatgtagcagagtatggcctagtaggcc
atcatggaggagagccattggtcttgtgaagattatatgcccagtacagg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_28120043_28120947
seq2: B6Ng01-317I03.g_67_967 (reverse)

seq1  CCCTGTACTGGGGCATATAATCTTCACAAGACCAATGGCCTCTCCTCCCA  50
      ||||||||| |||||||||||||||||||||||||||| |||||||||  
seq2  CCCTGTACT-GGGCATATAATCTTCACAAGACCAATGG-CTCTCCTCC--  46

seq1  TTGATGGCCTACTAGGCCATACTCTGCTACATATGCAACTAGAGACACAA  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGCCTACTAGGCCATACTCTGCTACATATGCAACTAGAGACACAA  96

seq1  GCTCTTGAGGTACTGGTTAGTTCATATTGTTTTTCCTCCTATAGGGTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGAGGTACTGGTTAGTTCATATTGTTTTTCCTCCTATAGGGTTCC  146

seq1  AGACCCCATTAGCTCCTTGAGTACGTTCTCTAGCTTCTTCATTGGAGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCCATTAGCTCCTTGAGTACGTTCTCTAGCTTCTTCATTGGAGGCC  196

seq1  CTGTGTTCCATCCAATAGATGACTATAAATTAAATGTAAACAATACTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCCATCCAATAGATGACTATAAATTAAATGTAAACAATACTTGT  246

seq1  TAAGTACAAAAAAGCTCATGGACTGAATGAAACCCAGTTAACTCTTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACAAAAAAGCTCATGGACTGAATGAAACCCAGTTAACTCTTTTCA  296

seq1  CCAAGCTAAGGAAATAACATTTTGGTGCACTGTTTTTTGTTTTTGTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTAAGGAAATAACATTTTGGTGCACTGTTTTTTGTTTTTGTTTTT  346

seq1  TTTTTTTTAATACTCTTTTAGGATAATAAATAATAGAATAAATTTAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAATACTCTTTTAGGATAATAAATAATAGAATAAATTTAAGAA  396

seq1  AGTAGGAAGGTATTTGTGGTACTCCTTTAATGAAGAAGCTGCATGTCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAAGGTATTTGTGGTACTCCTTTAATGAAGAAGCTGCATGTCAAC  446

seq1  ATAATGAATATAAGTAAATCTAAATAGCGGGATCTCTATGAAATACAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAATATAAGTAAATCTAAATAGCGGGATCTCTATGAAATACAAGT  496

seq1  ATGAAATTTGAAAAGTTGTATAGAATATGAACCTTTGTAAATTGCTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTTGAAAAGTTGTATAGAATATGAACCTTTGTAAATTGCTGTGT  546

seq1  TGCTGGAGAAGTTTTAGCTTGTCACTGTGTTTTGTACAGCTGCAAACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGAAGTTTTAGCTTGTCACTGTGTTTTGTACAGCTGCAAACAAT  596

seq1  AGTCTAGCGATAGATGACCATCTATACCTACGTTTTTTACAAGTGGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGCGATAGATGACCATCTATACCTACGTTTTTTACAAGTGGAATT  646

seq1  CACTGTTTATTTAAATAAAATCTATAATTCAGTGCTCAGTTTTACTAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTTATTTAAATAAAATCTATAATTCAGTGCTCAGTTTTACTAGAC  696

seq1  TTTGCGCATTTTCAATAGTCACAAGTAGCCATTAGTCACCAGTTAAGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCGCATTTTCAATAGTCACAAGTAGCCATTAGTCACCAGTTAAGTGT  746

seq1  CTTGTTTACAAACTATGGCAGCATGGCAAAAGGTTCTACTGAATTATTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTACAAACTATGGCAGCATGGCAAAAGGTTCTACTGAATTATTCT  796

seq1  ATTCAAAGACAATTGTCAGTATTTATTCCAACCTCATAAAATATATGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAGACAATTGTCAGTATTTATTCCAACCTCATAAAATATATGAAA  846

seq1  ATTGCTGCCCGTGTAGGCCTCACGTAATTAAAGAATATGTAGGAAGAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGCCCGTGTAGGCCTCACGTAATTAAAGAATATGTAGGAAGAAAG  896

seq1  AATTC  905
      |||||
seq2  AATTC  901