BAC Information

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BAC

Clone NameB6Ng01-317N16
Chromosome4 (Build37)
Map Location 23,431,087 - 23,431,819
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664911, 1700025O08Rik, LOC625462
Downstream geneLOC383998, LOC100040464, LOC623873, LOC664973
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317N16.bB6Ng01-317N16.g
ACCGA107897GA107898
length1,214737
definitionB6Ng01-317N16.b B6Ng01-317N16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ccaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactgggttgttatcatgtagaagaatgcgaatcgatccatacttat
ctccttgtactaaggtcaaatctaagtggatcaggaacttcacataaaac
cagaagaccactgaaacttatagaggagaaagttgggaaagcccttgaga
aatggcacaggaaattctgaacgaaacagcatgctgtgctgtagatcata
ttgacatgacctatgactcagttctgcagttcaaaagaacactggttctc
tagaggaccaaagt
gaattccttagtggctatagatatgaaaacataaatactagtaacattat
aagcaggctggatttatgaacttgggaatttatatgtatagacatatact
atttatgtgataattaatacaaaatgcatcatggatttaaaagaagatca
aagaggggtatgtggaagggtatggagagagaaagggacagggaaaatgg
tataattatattataatctcataacataaaaggaataattagggtttttt
tttataaaacagtttttctgcatccagttcaagagttgttttttgtcttt
tgttgctgtttgcttgttttgcaattgcattaagttatttacaacaaatc
agttttgaatcagagaaacttaaagaagaaaacaatggctctggatttca
tttatgttaaactttttcccattgtgatgattctcccaccatttaaaaca
catcattgatgatgttcatacatataatacaggagatactgtctgtagac
tttctatcagattcattacagttgtaaaactttagcaataaaacaaaaat
gaacctagacactagaagcttaacattctccattcagttaaacaaaattc
acatatattgcatataaaatcatagtaaaattagttttaaaaatataaaa
acaagagttgttagtgtgtttggtagggtatgcttattctattacacttc
caacaaaaagattcgccacaaattttgtttgattatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_23431087_23431819
seq2: B6Ng01-317N16.g_68_804

seq1  GAATTCCTTAGTGGCTATAGATATGAAAACATAAATACTAGTAACATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGTGGCTATAGATATGAAAACATAAATACTAGTAACATTAT  50

seq1  AAGCAGGCTGGATTTATGAACTTGGGAATTTATATGTATAGACATATACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGCTGGATTTATGAACTTGGGAATTTATATGTATAGACATATACT  100

seq1  ATTTATGTGATAATTAATACAAAATGCATCATGGATTTAAAAGAAGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGTGATAATTAATACAAAATGCATCATGGATTTAAAAGAAGATCA  150

seq1  AAGAGGGGTATGTGGAAGGGTATGGAGAGAGAAAGGGACAGGGAAAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGGTATGTGGAAGGGTATGGAGAGAGAAAGGGACAGGGAAAATGG  200

seq1  TATAATTATATTATAATCTCATAACATAAAAGGAATAATTAGGGTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTATATTATAATCTCATAACATAAAAGGAATAATTAGGGTTTTTT  250

seq1  TTTATAAAACAGTTTTTCTGCATCCAGTTCAAGAGTTGTTTTTTGTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAACAGTTTTTCTGCATCCAGTTCAAGAGTTGTTTTTTGTCTTT  300

seq1  TGTTGCTGTTTGCTTGTTTTGCAATTGCATTAAGTTATTTACAACAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGTTTGCTTGTTTTGCAATTGCATTAAGTTATTTACAACAAATC  350

seq1  AGTTTTGAATCAGAGAAACTTAAAGAAGAAAACAATGGCTCTGGATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGAATCAGAGAAACTTAAAGAAGAAAACAATGGCTCTGGATTTCA  400

seq1  TTTATGTTAAACTTTTTCCCATTGTGATGATTCTCCCACCATTTAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTAAACTTTTTCCCATTGTGATGATTCTCCCACCATTTAAAACA  450

seq1  CATCATTGATGATGTTCATACATATAATACAGGAGATACTGTCTGTAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTGATGATGTTCATACATATAATACAGGAGATACTGTCTGTAGAC  500

seq1  TTTCTATCAGATTCATTACAGTTGTAAAACTTTAGCAATAAAACAAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATCAGATTCATTACAGTTGTAAAACTTTAGCAATAAAACAAAAAT  550

seq1  GAACCTAGACACTAGAAGCTTAACATTCTCCATTCAGTTAAACAAAATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTAGACACTAGAAGCTTAACATTCTCCATTCAGTTAAACAAAATTC  600

seq1  ACATATATTGCATATAAAATCATAGT-AAATTAGTTTT-AAAATATAAAA  648
      |||||||||||||||||||||||||| ||||||||||| |||||||||||
seq2  ACATATATTGCATATAAAATCATAGTAAAATTAGTTTTAAAAATATAAAA  650

seq1  ACAAGAGTTGTTAGTGTG-TTGGTAGGTTATGCTTATTCTATTACACTTA  697
      |||||||||||||||||| |||||||| ||||||||||||||||||||| 
seq2  ACAAGAGTTGTTAGTGTGTTTGGTAGGGTATGCTTATTCTATTACACTT-  699

seq1  CCAACAAAAAGATTCGTCACAAATTT--GTTGATTATG  733
      |||||||||||||||| |||||||||   |||||||||
seq2  CCAACAAAAAGATTCGCCACAAATTTTGTTTGATTATG  737