BAC Information

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BAC

Clone NameB6Ng01-323B19
Chromosome4 (Build37)
Map Location 23,842,285 - 23,843,383
singlet/doubletsinglet
Overlap genenone
Upstream gene1700025O08Rik, LOC625462, LOC383998, LOC100040464, LOC623873
Downstream geneLOC664973, F730047E07Rik, Klhl32, 1110007M04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323B19.bB6Ng01-323B19.g
ACCGA111776GA111777
length961,093
definitionB6Ng01-323B19.b B6Ng01-323B19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatcttttaagggggttatttgatt
ttctggagtccaccctcttgagttctgggtgggtaggggagttggg

gaattcactaatgctgcacatttggctaggtttccaataccagtcatggt
tttttctcttgttgaatggagcttaggtccaataagagagtgctttttta
ttcatttacagtatttttgagatatctttatgagttgattatgttgtagg
ttctcacttgtgtttttatagagttgtatagagacaaagaatactggtag
cttaatgattactgcaagagctccatcagcgtgccatatagtgtcaaatt
ctagttcctattatttgatgtcattatgtatatttacccaatccctcatg
ctcccttaagtaaaacttttagttatctttaattattgtagaagaaaatg
caggcatgagtaagtaatcagcctaccttgcacactgcacttctaaatta
gaagcaaggcacacgatgctactgagtgccatgctcctggatatcagagt
attgaattctgaggtagctgagtagctagtaactggactgcggatgaatt
tacactatctattattcctttaatgtgattattccacataaagtctctgg
tggtatgagcacttacgtccaatctgaggtagtatgctaactaatcagtt
gataggtttctaatatataagtggttgcttacatgcaataaagcagacac
tgttctctgaaaccattttcagaacagtttatctctgccacctttacaga
cctatagacattgttttcttgtcagataatgcttcagtaatgacagcaaa
ttatgtatattcacagacttaaaaagcctatctgtgatcattaattaaaa
tatttttctcatgctacggttaataagccatgggaaataagcgagtaaat
agtacccctgcattgcctctgcatcgactcctgcctccatgttcctgcct
tgcttgagttcctgctctggctttgctcagtgatagattagctgtaatat
tataagccaaaataaactattccccccccaacttgcttgtcttcatgttg
ttcaccagagtatagtaccctaactatgacttgtatagacatggtgaata
ctagaagccaagatgtcaatggaaaaacatattgtttatagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_23842285_23843383
seq2: B6Ng01-323B19.g_62_1154 (reverse)

seq1  AGCTATAAAACAATATGTTTTCAATTTGACATCTTGGCTTCTAGTA-TCA  49
      |||||| ||||||||||||||    ||||||||||||||||||||| |||
seq2  AGCTAT-AAACAATATGTTTTTCCATTGACATCTTGGCTTCTAGTATTCA  49

seq1  CCATGTTCTATTAACAAGTCATAGTTAGGGTTACTAATACTCTGGTGAAA  99
      ||||| |||||  ||||||||||||||||| |||| ||||||||||| ||
seq2  CCATG-TCTAT--ACAAGTCATAGTTAGGG-TACT-ATACTCTGGTG-AA  93

seq1  CAACATGAAGACAAGCAAGTTGGGGGGGGAATAGTTTA-TTTGGCTTATA  148
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CAACATGAAGACAAGCAAGTTGGGGGGGGAATAGTTTATTTTGGCTTATA  143

seq1  ATATTACAGCCTAATCTATCACTGAGCAAAGCCAGAGCAGGAACTCAAGC  198
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACAG-CTAATCTATCACTGAGCAAAGCCAGAGCAGGAACTCAAGC  192

seq1  AAGGCAGGAACATGGAGGCAGGAGTCGATGCAGAGGCAATGCAGGGGTAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGAACATGGAGGCAGGAGTCGATGCAGAGGCAATGCAGGGGTAC  242

seq1  TATTTACTCGCTTATTTCCCATGGCTTATTAACCGTAGCATGAGAAAAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTCGCTTATTTCCCATGGCTTATTAACCGTAGCATGAGAAAAAT  292

seq1  ATTTTAATTAATGATCACAGATAGGCTTTTTAAGTCTGTGAATATACATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTAATGATCACAGATAGGCTTTTTAAGTCTGTGAATATACATA  342

seq1  ATTTGCTGTCATTACTGAAGCATTATCTGACAAGAAAACAATGTCTATAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGTCATTACTGAAGCATTATCTGACAAGAAAACAATGTCTATAG  392

seq1  GTCTGTAAAGGTGGCAGAGATAAACTGTTCTGAAAATGGTTTCAGAGAAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTAAAGGTGGCAGAGATAAACTGTTCTGAAAATGGTTTCAGAGAAC  442

seq1  AGTGTCTGCTTTATTGCATGTAAGCAACCACTTATATATTAGAAACCTAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTGCTTTATTGCATGTAAGCAACCACTTATATATTAGAAACCTAT  492

seq1  CAACTGATTAGTTAGCATACTACCTCAGATTGGACGTAAGTGCTCATACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGATTAGTTAGCATACTACCTCAGATTGGACGTAAGTGCTCATACC  542

seq1  ACCAGAGACTTTATGTGGAATAATCACATTAAAGGAATAATAGATAGTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGACTTTATGTGGAATAATCACATTAAAGGAATAATAGATAGTGT  592

seq1  AAATTCATCCGCAGTCCAGTTACTAGCTACTCAGCTACCTCAGAATTCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATCCGCAGTCCAGTTACTAGCTACTCAGCTACCTCAGAATTCAA  642

seq1  TACTCTGATATCCAGGAGCATGGCACTCAGTAGCATCGTGTGCCTTGCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGATATCCAGGAGCATGGCACTCAGTAGCATCGTGTGCCTTGCTT  692

seq1  CTAATTTAGAAGTGCAGTGTGCAAGGTAGGCTGATTACTTACTCATGCCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTAGAAGTGCAGTGTGCAAGGTAGGCTGATTACTTACTCATGCCT  742

seq1  GCATTTTCTTCTACAATAATTAAAGATAACTAAAAGTTTTACTTAAGGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCTTCTACAATAATTAAAGATAACTAAAAGTTTTACTTAAGGGA  792

seq1  GCATGAGGGATTGGGTAAATATACATAATGACATCAAATAATAGGAACTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGGGATTGGGTAAATATACATAATGACATCAAATAATAGGAACTA  842

seq1  GAATTTGACACTATATGGCACGCTGATGGAGCTCTTGCAGTAATCATTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGACACTATATGGCACGCTGATGGAGCTCTTGCAGTAATCATTAA  892

seq1  GCTACCAGTATTCTTTGTCTCTATACAACTCTATAAAAACACAAGTGAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCAGTATTCTTTGTCTCTATACAACTCTATAAAAACACAAGTGAGA  942

seq1  ACCTACAACATAATCAACTCATAAAGATATCTCAAAAATACTGTAAATGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAACATAATCAACTCATAAAGATATCTCAAAAATACTGTAAATGA  992

seq1  ATAAAAAAGCACTCTCTTATTGGACCTAAGCTCCATTCAACAAGAGAAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAGCACTCTCTTATTGGACCTAAGCTCCATTCAACAAGAGAAAA  1042

seq1  AACCATGACTGGTATTGGAAACCTAGCCAAATGTGCAGCATTAGTGAATT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGACTGGTATTGGAAACCTAGCCAAATGTGCAGCATTAGTGAATT  1092

seq1  C  1099
      |
seq2  C  1093


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