BAC Information

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BAC

Clone NameB6Ng01-323E06
Chromosome4 (Build37)
Map Location 30,978,247 - 30,979,391
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665185, LOC619906, LOC100040864
Downstream geneLOC100040891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323E06.bB6Ng01-323E06.g
ACCGA111892GA111893
length1,2021,178
definitionB6Ng01-323E06.b B6Ng01-323E06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactgtttatctctgagccccatttttcaatggggttatttgatt
ttctgaagtccgccttcttgagttctttatatatattggatattagtcct
ctatctgatttaggattggtaaagctcctttcccaatctgttgatgcctt
ttttgtctcattgatggtgtcttttgccttacagaagctttgcagtttca
tgagggcccatttgtcaattctcaatcttacagcacaagccattgctgtt
ctattcaggaattttttcccctgtgccaatatcttcgaggcttttccaca
ctttctcctctataagtttcagtgtctctggttttatgtggagctccttg
atccacgtagattagaccttagtacaaggagataggattggatcaatttg
cattcttctacatgataaccatcagttgtgccagcaccatttgttgaaaa
tgctgtctttttttccactggatggttttagcttccttgtcgaagatcaa
gtgaccataggtgtgtgggttcatttctgggtcttcaattctattccatt
ggtctacttgtctgtcactataccagtaccatgccgtttttatcacagat
gctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttct
tttatccttgagaagagtttttgctatcctaggttttttattattccaga
tgaatttgcagattgttctttctaattcattgaagaattgagttggaatt
ttgatggggattgcattgaatctatagattgcttttggcaagatagccat
ttttacattgttgatcctgccaatccatgagcatgggagatctttccatc
ttctgagatcttctttaatttctttcttcagagacttgaagttcttatca
cacagttctttcacgtccttagttagagtcacgccaaggtatttatactt
tgtgacttttgagaacggtgttgttccctaatttctttctcagcctgttt
atccttgtgtacagaatgcattgacttgttttgagttaatttttaatatc
agctacctcacgaagcttgtttaccaggatagagttctctggtgattcca
ggttcactttatatatcctatcatattcactggcgaaagtgaattttgac
atctggacatttgttatcccatggaatccctttttgtgccgaatggctcc
tg

gaattcttttccactggacctcttgcttttggcatcagtgtttggcatgg
cacaacatggggccaggacaatgaaaatgcaatgaaatagaagtaatggg
gaattcttggcagagccgtcaacaaaatagaggcattttgaagcagggga
atggaagctctgttagtgagggtcttgccttcaggggagagaatggtacc
tggataaagtgttcctgttccctcatctccagctgccagctactttgtcc
atgctggaggaaggtgaacaagcaaacaggaaagaaagagagggggtgat
ttaaaagggatagaaatgtcctaatttatccggaagccattattcatgaa
atcgactttttgtgaccatcaacaatactttaggaataattatgggatga
ttttctaagttagttggatgtgaatttttcatggtttttgaatgtctact
tctccctctgttcttttttatgttttcccacactctctcaagttaatgat
ttcttcttctataatcattggtgatatatatgcatgtatgatatagacat
atatagtatatatatgcatgtatgatataggcatacatatatatatatga
tttctctatgtctgttctaaacatgtttgatttttaatgttggcaaattc
cttcaagagcaatcaattcagttgtatgtcaggaacaccaaagacattac
caattatggaacatggactctattccataatgttcttatcatatttaata
ttagcaagctcacttaatcttagaacttacaacacttttatgaaataagt
actattatattcatgtgatatctgggacaatagtagtttgcagtttttaa
atattgttgctaaccctctaatttcattatgctactaaatattaaattgg
gactttcaggtcttctctttttccttaaaagtggtttggttttttccttc
caccattatactacatgctcttgataatttttacataataaccttaatgg
aatcattcccttatggaggtacattataaggtaacatgggtttcctagca
ttccctttcaagcctaggtagaatacctggccaatcctccatttcccaca
gatgggttgggtggggagttagagggagccaggatcacaagaccagtgtg
agtcaagccattggtttaacctgtgccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30978247_30979391
seq2: B6Ng01-323E06.g_62_1239 (reverse)

seq1  GGGCACAGGTTAAAACAAATGCTTTGAATCTAACATGTC-TGTGATCTTG  49
      ||||||||||| |||| ||||  |||| ||  ||  ||| ||||||| ||
seq2  GGGCACAGGTT-AAACCAATGGCTTGACTCACACTGGTCTTGTGATCCTG  49

seq1  GCT-CCTCTA---CTCCAC---AACCATCTGT--GAAATGAAG--ATGGC  88
      ||| ||||||   | ||||   | ||||||||  |||||| ||   ||||
seq2  GCTCCCTCTAACTCCCCACCCAACCCATCTGTGGGAAATGGAGGATTGGC  99

seq1  --AGTA-TCTACTTAAGC-TGAAA-GGAATGCTAG--AAACCATGTTAC-  130
         ||| ||||| || || ||||| ||||||||||  || ||||||||| 
seq2  CAGGTATTCTACCTAGGCTTGAAAGGGAATGCTAGGAAACCCATGTTACC  149

seq1  -TATAATGTAC--TCATAAGGGAAATGA-TCCAT--AAGTTA-TATGT-A  172
       ||||||||||   |||||||| ||||| |||||  | |||| ||||| |
seq2  TTATAATGTACCTCCATAAGGG-AATGATTCCATTAAGGTTATTATGTAA  198

seq1  AAATTATCAAGAGCATGTAGTATAAT-GTGGAAGG--AAAACCAAA-CAC  218
      |||||||||||||||||||||||||| ||||||||  ||||||||| |||
seq2  AAATTATCAAGAGCATGTAGTATAATGGTGGAAGGAAAAAACCAAACCAC  248

seq1  TTTTAAGGAAAAAGAGAAGACCTG-AAGT-CCAATTTAATATTTAGTAGC  266
      |||||||||||||||||||||||| |||| ||||||||||||||||||||
seq2  TTTTAAGGAAAAAGAGAAGACCTGAAAGTCCCAATTTAATATTTAGTAGC  298

seq1  ATAATGAAATTAGA-GGTTAGCAACAATATTTAAAAACTGCAAACTACTA  315
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATAATGAAATTAGAGGGTTAGCAACAATATTTAAAAACTGCAAACTACTA  348

seq1  TTGTCCCAGATATCACATGAATATAATAGTACTTATTTCATAAAAGTGTT  365
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCAGATATCACATGAATATAATAGTACTTATTTCATAAAAGTGTT  398

seq1  GTAAGTTCTAAGATTAAGTGAGCTTGCTAATATTAAATATGATAAGAACA  415
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTCTAAGATTAAGTGAGCTTGCTAATATTAAATATGATAAGAACA  448

seq1  TTATGGAATAGAGTCCATGTTCCATAATTGGTAATGTCTTTGGTGTTCCT  465
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAATAGAGTCCATGTTCCATAATTGGTAATGTCTTTGGTGTTCCT  498

seq1  GACATACAACTGAATTGATTGCTCTTGAAGGAATTTGCCAACATTAAAAA  515
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACAACTGAATTGATTGCTCTTGAAGGAATTTGCCAACATTAAAAA  548

seq1  TCAAACATGTTTAGAACAGACATAGAGAAATCATATATATATATGTATGC  565
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACATGTTTAGAACAGACATAGAGAAATCATATATATATATGTATGC  598

seq1  CTATATCATACATGCATATATATACTATATATGTCTATATCATACATGCA  615
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCATACATGCATATATATACTATATATGTCTATATCATACATGCA  648

seq1  TATATATCACCAATGATTATAGAAGAAGAAATCATTAACTTGAGAGAGTG  665
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATCACCAATGATTATAGAAGAAGAAATCATTAACTTGAGAGAGTG  698

seq1  TGGGAAAACATAAAAAAGAACAGAGGGAGAAGTAGACATTCAAAAACCAT  715
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAACATAAAAAAGAACAGAGGGAGAAGTAGACATTCAAAAACCAT  748

seq1  GAAAAATTCACATCCAACTAACTTAGAAAATCATCCCATAATTATTCCTA  765
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTCACATCCAACTAACTTAGAAAATCATCCCATAATTATTCCTA  798

seq1  AAGTATTGTTGATGGTCACAAAAAGTCGATTTCATGAATAATGGCTTCCG  815
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTGTTGATGGTCACAAAAAGTCGATTTCATGAATAATGGCTTCCG  848

seq1  GATAAATTAGGACATTTCTATCCCTTTTAAATCACCCCCTCTCTTTCTTT  865
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATTAGGACATTTCTATCCCTTTTAAATCACCCCCTCTCTTTCTTT  898

seq1  CCTGTTTGCTTGTTCACCTTCCTCCAGCATGGACAAAGTAGCTGGCAGCT  915
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGCTTGTTCACCTTCCTCCAGCATGGACAAAGTAGCTGGCAGCT  948

seq1  GGAGATGAGGGAACAGGAACACTTTATCCAGGTACCATTCTCTCCCCTGA  965
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGAGGGAACAGGAACACTTTATCCAGGTACCATTCTCTCCCCTGA  998

seq1  AGGCAAGACCCTCACTAACAGAGCTTCCATTCCCCTGCTTCAAAATGCCT  1015
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGACCCTCACTAACAGAGCTTCCATTCCCCTGCTTCAAAATGCCT  1048

seq1  CTATTTTGTTGACGGCTCTGCCAAGAATTCCCCATTACTTCTATTTCATT  1065
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTGTTGACGGCTCTGCCAAGAATTCCCCATTACTTCTATTTCATT  1098

seq1  GCATTTTCATTGTCCTGGCCCCATGTTGTGCCATGCCAAACACTGATGCC  1115
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCATTGTCCTGGCCCCATGTTGTGCCATGCCAAACACTGATGCC  1148

seq1  AAAAGCAAGAGGTCCAGTGGAAAAGAATTC  1145
      ||||||||||||||||||||||||||||||
seq2  AAAAGCAAGAGGTCCAGTGGAAAAGAATTC  1178


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