BAC Information

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BAC

Clone NameB6Ng01-323N10
Chromosome4 (Build37)
Map Location 131,263,815 - 131,264,996
singlet/doubletsinglet
Overlap genenone
Upstream genePum1, Sdc3, Laptm5, Matn1, LOC622681, LOC100041575, Gm831, EG664832, LOC100039799
Downstream genePtpru, Mecr, Sfrs4, EG664865, EG623230, Epb4.1, LOC666480, LOC100039835, Oprd1, LOC664894, Ythdf2, LOC664903, Gmeb1, Rnu11, Taf12, 9530096D07Rik, LOC100039864, Trspap1, Rcc1, Snhg3, Phactr4, Med18, Sesn2, Atpif1, Dnajc8, Ptafr, Eya3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323N10.bB6Ng01-323N10.g
ACCGA112312GA112313
length1,186160
definitionB6Ng01-323N10.b B6Ng01-323N10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacctagcaatccaaagaatgcaggcaaggccctggtgcttcca
ttttgtagctggggaaacagaggcacagggagggaaggtgctgtgcccac
agtcacgctgacaaatgggaagctgaatctggacaccatttggcctcctt
atgcttaggctgagaatcttccttccttccacggaatccggtgtgcagaa
gacaccctcctccctccatctcccaggtaggccttggtactcttgctggt
aatgaccagaaatgggcagttatgggctctgctccccaagaactctcagg
tcaggagaggtagagacaacagcagccccccttcaggctctactcagccc
ttccctcccgtttgatgaaaggcagtgccaacctttctgagcctgggtct
cattagctcagaaagaggcagcaatgcccaatggtagaccatgaggagag
ccagatgtgggtcactctatgtgggtcacccacatcttacatatgatttt
acttgggcctgcatgaagctttattacctacaagacctcatctggctgat
gcccagtctttatgaaggaggctacttctttggtcctgaaacactccaag
tggaagctaaagtgtctcaggctgtaagaagaggggtgcagacaagaaag
gttttgctcttcaatgtggcacaatgggccaggcacagacagggaactag
cagagaagatgccatgtcccagggttgggccagtccttgttacatacaga
ctatatctctgctactcacagaaggaaaccgaggtccagagaggggaagt
ctcgattttatacaactaagcacaggtcggcttacttcttagttgtggtt
cttcaatgagaaatccttaatttttctccattctcaaaactgtaagcagg
cagcatgaagtggatccttgtttctatgtgctctatttgacacctagaga
gtaataaacttagaaatttaatcaaaacgagttttaatttctattagaaa
gcagaaaaatagaggctatgcatgcttaaaagtccacaaagcatcagttg
ccccgcatcttagtcattcttctagaacaaacccagcagtgattatcacc
ccccactgggcgtctaccccacaggattaagcttggcacttgaggaccta
atggtggttaggtcctgttatggttgaagtttctgc
tgacccacttccatggaacttgcctatttggcctaggctgggtgtgtggg
gaacttggagcatgactggattattgtaccttcaagtggtgactccagct
gtacccgctgtctcagattaaatggaggaggaggagatctgggaaagaag
ggaggtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_131263815_131264996
seq2: B6Ng01-323N10.b_49_1234

seq1  GAATTCAACCTAGCAATCCAAAGAATGCAGGCAAGGCCCTGGTGCTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTAGCAATCCAAAGAATGCAGGCAAGGCCCTGGTGCTTCCA  50

seq1  TTTTGTAGCTGGGGAAACAGAGGCACAGGGAGGGAAGGTGCTGTGCCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAGCTGGGGAAACAGAGGCACAGGGAGGGAAGGTGCTGTGCCCAC  100

seq1  AGTCACGCTGACAAATGGGAAGCTGAATCTGGACACCATTTGGCCTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACGCTGACAAATGGGAAGCTGAATCTGGACACCATTTGGCCTCCTT  150

seq1  ATGCTTAGGCTGAGAATCTTCCTTCCTTCCACGGAATCCGGTGTGCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAGGCTGAGAATCTTCCTTCCTTCCACGGAATCCGGTGTGCAGAA  200

seq1  GACACCCTCCTCCCTCCATCTCCCAGGTAGGCCTTGGTACTCTTGCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCTCCTCCCTCCATCTCCCAGGTAGGCCTTGGTACTCTTGCTGGT  250

seq1  AATGACCAGAAATGGGCAGTTATGGGCTCTGCTCCCCAAGAACTCTCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCAGAAATGGGCAGTTATGGGCTCTGCTCCCCAAGAACTCTCAGG  300

seq1  TCAGGAGAGGTAGAGACAACAGCAGCCCCCCTTCAGGCTCTACTCAGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGAGGTAGAGACAACAGCAGCCCCCCTTCAGGCTCTACTCAGCCC  350

seq1  TTCCCTCCCGTTTGATGAAAGGCAGTGCCAACCTTTCTGAGCCTGGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCCCGTTTGATGAAAGGCAGTGCCAACCTTTCTGAGCCTGGGTCT  400

seq1  CATTAGCTCAGAAAGAGGCAGCAATGCCCAATGGTAGACCATGAGGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCTCAGAAAGAGGCAGCAATGCCCAATGGTAGACCATGAGGAGAG  450

seq1  CCAGATGTGGGTCACTCTATGTGGGTCACCCACATCTTACATATGATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGTGGGTCACTCTATGTGGGTCACCCACATCTTACATATGATTTT  500

seq1  ACTTGGGCCTGCATGAAGCTTTATTACCTACAAGACCTCATCTGGCTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGCCTGCATGAAGCTTTATTACCTACAAGACCTCATCTGGCTGAT  550

seq1  GCCCAGTCTTTATGAAGGAGGCTACTTCTTTGGTCCTGAAACACTCCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTCTTTATGAAGGAGGCTACTTCTTTGGTCCTGAAACACTCCAAG  600

seq1  TGGAAGCTAAAGTGTCTCAGGCTGTAAGAAGAGGGGTGCAGACAAGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTAAAGTGTCTCAGGCTGTAAGAAGAGGGGTGCAGACAAGAAAG  650

seq1  GTTTTGCTCTTCAATGTGGCACAATGGGCCAGGCACAGACAGGGAACTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCTCTTCAATGTGGCACAATGGGCCAGGCACAGACAGGGAACTAG  700

seq1  CAGAGAAGATGCCATGTCCCAGGGTTGGGCCAGTCCTTGTTACATACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAGATGCCATGTCCCAGGGTTGGGCCAGTCCTTGTTACATACAGA  750

seq1  CTATATCTCTGCTACTCACAGAAGGAAACCGAGGTCCAGAGAGGGGAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCTCTGCTACTCACAGAAGGAAACCGAGGTCCAGAGAGGGGAAGT  800

seq1  CTCGATTTTATACAACTAAGCACAGGTCGGCTTACTTCTTAGTTGTGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGATTTTATACAACTAAGCACAGGTCGGCTTACTTCTTAGTTGTGGTT  850

seq1  CTTCAATGAGAAATCCTTAATTTTTCTCCATTCTCAAAAACTGTAAGCAG  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTTCAATGAGAAATCCTTAATTTTTCTCCATTCTC-AAAACTGTAAGCAG  899

seq1  GCAGCATGAAGTGGATCCTTGTTTCTATGTGCTCTATTTGACACCTAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATGAAGTGGATCCTTGTTTCTATGTGCTCTATTTGACACCTAGAG  949

seq1  AGTAATAAAACTTAGAAATTTAATCAAAACGAGTTTTAATTTCTATTAGA  1000
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  AGTAAT-AAACTTAGAAATTTAATCAAAACGAGTTTTAATTTCTATTAG-  997

seq1  AAAGCAG-AAAATAGAGGCTATGCATGC-TAAAAGTCCAACAAAGCATCA  1048
      ||||||| |||||||||||||||||||| ||||||||| |||||||||||
seq2  AAAGCAGAAAAATAGAGGCTATGCATGCTTAAAAGTCC-ACAAAGCATCA  1046

seq1  GTTGCCCCGCATC-TAGTTCATCTTCTAGAAC-AACACAGCAAGTGA-TA  1095
      ||||||||||||| ||||   ||||||||||| ||| |||| ||||| ||
seq2  GTTGCCCCGCATCTTAGTCATTCTTCTAGAACAAACCCAGC-AGTGATTA  1095

seq1  TCA--CCCCACT-GGCGCCTACCCCACAGGGTTAGGC-TGGCACTGAAGG  1141
      |||  ||||||| |||| |||||||||||| ||| || |||||||  |||
seq2  TCACCCCCCACTGGGCGTCTACCCCACAGGATTAAGCTTGGCACTTGAGG  1145

seq1  AACTTAGTGTGTGTAAAGTGCTGTTATGGTTG-AGTTTCTGC  1182
      | || |  ||| || | || |||||||||||| |||||||||
seq2  ACCTAATGGTG-GTTAGGTCCTGTTATGGTTGAAGTTTCTGC  1186