BAC Information

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BAC

Clone NameB6Ng01-324B07
Chromosome4 (Build37)
Map Location 91,838,948 - 91,990,773
singlet/doubletdoublet
Overlap geneLOC68280
Upstream geneLOC100042274, Elavl2, LOC664864, LOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik
Downstream geneLOC620269, LOC384125
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324B07.bB6Ng01-324B07.g
ACCGA112489GA112490
length819894
definitionB6Ng01-324B07.b B6Ng01-324B07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,989,955 - 91,990,773)(91,838,948 - 91,839,830)
sequence
gaattctgaaaatgtaattttaaagactgttgacattcattgggtattat
gaaaatcattctagttaatacattgggcatttaattagcaatacttcaga
gttaggtaagaggtctgtaatggataactgactttgaaatagattttatt
attggaaatatcatgaaacatattcagaaatgaatcagtaaattaataat
gactttctaggaaaacatccatagaagaggaggaagaggaaaatatccta
aagactactgaggtcattgaaacataattaaaaagtaaaaaataataggt
caggatttaataggtcagaatttcatcttcaaaacttgtcagcacaaagt
ccatttcttaactattatgcacatcctattttaccttcctaattgacaga
tatgcctttctaatttacagatatgaccaaatgtgaactatcaataaaaa
tacaaccagcaatatattttgcctaagttgtattccattatattttatga
agatagtgtagagagtgtatgtctgctattgtgtcttattatatgtgagt
gatggttctatgagattaaaagaaattgggtctcacttaactataattga
atcttgaaagatccccttcccaagcttagcattcctagaaggagagctcc
atagcgtaatttgaaaggagaaacaccagttctcagcacaggtacaatct
caagacctgcagatcttttgacattgtgtgagtgtcctaaaaacatctct
gaaattggccaatatgtcctatcattttcattatgtgttagtgtgtatgt
gtatgtatatgtgtgtttg
gaattcttttagatatataagaatctgatggtcaagagctgctgcaattt
aaggtcagttgtgtttgggtagaaccctgataatgaccccatgaccctac
agtaaagatatagagagaaattagaattagttttgaaaaacaacatcatg
tgctggaaatgtagaagagaatggttttttacagagagaagagagagaaa
gaaagagagagagagggagggagagagagagagaaagagaaagaggaaca
ttgcactacattaatcagaaatattatacatggtcaatgacagtctgatt
aagaaaagtaccttagggttgtaggtcagattctggaataaaaaacactg
aacactaatttgagtgaaatatattgaattgaaagaggtaggtagttctt
tttctgttattaaaaatagtttatttttctaatatgacagacacatcctg
attatgattttccctccctctagttcttacatttccccccaccttccctc
acattctgatctaccctctatctttcttatattagaaacaacacagactt
ctaacaggtaataataaaagagaaaaagataaaacaaaaccaagcatatt
agaataggacaaatagaaggaaaggagcccaagaaaagacacaggaaaac
aaaatatagatgccaaatcccatttgttttgcacgctcgggagtccccac
caaaaatcaaaactgggaaaggaataatgtacatacaaagtaggataaag
cagcactgttttaaaataaaataaaataaaataaaatataataaattaca
ataaatagattaataacagaaaacccctcacagggatactatgaggttaa
gaaccctcttaaagatgtttgatctttgttttctgctagtcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_91989955_91990773
seq2: B6Ng01-324B07.b_49_867 (reverse)

seq1  CAAACACACATATACATACACATACACACTAACACATAATGAAAATGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACACATATACATACACATACACACTAACACATAATGAAAATGATA  50

seq1  GGACATATTGGCCAATTTCAGAGATGTTTTTAGGACACTCACACAATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATATTGGCCAATTTCAGAGATGTTTTTAGGACACTCACACAATGTC  100

seq1  AAAAGATCTGCAGGTCTTGAGATTGTACCTGTGCTGAGAACTGGTGTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATCTGCAGGTCTTGAGATTGTACCTGTGCTGAGAACTGGTGTTTC  150

seq1  TCCTTTCAAATTACGCTATGGAGCTCTCCTTCTAGGAATGCTAAGCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCAAATTACGCTATGGAGCTCTCCTTCTAGGAATGCTAAGCTTGG  200

seq1  GAAGGGGATCTTTCAAGATTCAATTATAGTTAAGTGAGACCCAATTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGATCTTTCAAGATTCAATTATAGTTAAGTGAGACCCAATTTCTT  250

seq1  TTAATCTCATAGAACCATCACTCACATATAATAAGACACAATAGCAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTCATAGAACCATCACTCACATATAATAAGACACAATAGCAGACA  300

seq1  TACACTCTCTACACTATCTTCATAAAATATAATGGAATACAACTTAGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTCTCTACACTATCTTCATAAAATATAATGGAATACAACTTAGGCA  350

seq1  AAATATATTGCTGGTTGTATTTTTATTGATAGTTCACATTTGGTCATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTGCTGGTTGTATTTTTATTGATAGTTCACATTTGGTCATATC  400

seq1  TGTAAATTAGAAAGGCATATCTGTCAATTAGGAAGGTAAAATAGGATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTAGAAAGGCATATCTGTCAATTAGGAAGGTAAAATAGGATGTG  450

seq1  CATAATAGTTAAGAAATGGACTTTGTGCTGACAAGTTTTGAAGATGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAGTTAAGAAATGGACTTTGTGCTGACAAGTTTTGAAGATGAAAT  500

seq1  TCTGACCTATTAAATCCTGACCTATTATTTTTTACTTTTTAATTATGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTATTAAATCCTGACCTATTATTTTTTACTTTTTAATTATGTTT  550

seq1  CAATGACCTCAGTAGTCTTTAGGATATTTTCCTCTTCCTCCTCTTCTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACCTCAGTAGTCTTTAGGATATTTTCCTCTTCCTCCTCTTCTATG  600

seq1  GATGTTTTCCTAGAAAGTCATTATTAATTTACTGATTCATTTCTGAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTCCTAGAAAGTCATTATTAATTTACTGATTCATTTCTGAATAT  650

seq1  GTTTCATGATATTTCCAATAATAAAATCTATTTCAAAGTCAGTTATCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATGATATTTCCAATAATAAAATCTATTTCAAAGTCAGTTATCCAT  700

seq1  TACAGACCTCTTACCTAACTCTGAAGTATTGCTAATTAAATGCCCAATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACCTCTTACCTAACTCTGAAGTATTGCTAATTAAATGCCCAATGT  750

seq1  ATTAACTAGAATGATTTTCATAATACCCAATGAATGTCAACAGTCTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTAGAATGATTTTCATAATACCCAATGAATGTCAACAGTCTTTAA  800

seq1  AATTACATTTTCAGAATTC  819
      |||||||||||||||||||
seq2  AATTACATTTTCAGAATTC  819

seq1: chr4_91838948_91839830
seq2: B6Ng01-324B07.g_65_958

seq1  GAATTCTTTTAGATATATAAGAATCTGATGGTCAAGAGCTGCTGCAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAGATATATAAGAATCTGATGGTCAAGAGCTGCTGCAATTT  50

seq1  AAGGTCAGTTGTGTTTGGGTAGAACCCTGATAATGACCCCATGACCCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCAGTTGTGTTTGGGTAGAACCCTGATAATGACCCCATGACCCTAC  100

seq1  AGTAAAGATATAGAGAGAAATTAGAATTAGTTTTGAAAAACAACATCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGATATAGAGAGAAATTAGAATTAGTTTTGAAAAACAACATCATG  150

seq1  TGCTGGAAATGTAGAAGAGAATGGTTTTTTACAGAGAGAAGAGAGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAAATGTAGAAGAGAATGGTTTTTTACAGAGAGAAGAGAGAGAAA  200

seq1  GAAAGAGAGAGAGAGGGAGGGAGAGAGAGAGAGAAAGAGAAAGAGGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAGAGAGAGGGAGGGAGAGAGAGAGAGAAAGAGAAAGAGGAACA  250

seq1  TTGCACTACATTAATCAGAAATATTATACATGGTCAATGACAGTCTGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTACATTAATCAGAAATATTATACATGGTCAATGACAGTCTGATT  300

seq1  AAGAAAAGTACCTTAGGGTTGTAGGTCAGATTCTGGAATAAAAAACACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGTACCTTAGGGTTGTAGGTCAGATTCTGGAATAAAAAACACTG  350

seq1  AACACTAATTTGAGTGAAATATATTGAATTGAAAGAGGTAGGTAGTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTAATTTGAGTGAAATATATTGAATTGAAAGAGGTAGGTAGTTCTT  400

seq1  TTTCTGTTATTAAAAATAGTTTATTTTTCTAATATGACAGACACATCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTATTAAAAATAGTTTATTTTTCTAATATGACAGACACATCCTG  450

seq1  ATTATGATTTTCCCTCCCTCTAGTTCTTACATTTCCCCCCACCTTCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGATTTTCCCTCCCTCTAGTTCTTACATTTCCCCCCACCTTCCCTC  500

seq1  ACATTCTGATCTACCCTCTATCTTTCTTATATTAGAAACAACACAGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTGATCTACCCTCTATCTTTCTTATATTAGAAACAACACAGACTT  550

seq1  CTAACAGGTAATAATAAAAGAGAAAAAGATAAAACAAAACCAAGCATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGGTAATAATAAAAGAGAAAAAGATAAAACAAAACCAAGCATATT  600

seq1  AGAATAGGACAAATAGAAGGAAAGGAGCCCAAGAAAAGACACAGGAAA--  648
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  AGAATAGGACAAATAGAAGGAAAGGAGCCCAAGAAAAGACACAGGAAAAC  650

seq1  CAAATATAGATGCCAAATCCCATTTG-TTTGCACGCTCGGGAGT-CCCAC  696
       ||||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  AAAATATAGATGCCAAATCCCATTTGTTTTGCACGCTCGGGAGTCCCCAC  700

seq1  CAAAAATCAAAACTGG--AAGGAATAATGTACATACAAAGTAGGATAAAG  744
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  CAAAAATCAAAACTGGGAAAGGAATAATGTACATACAAAGTAGGATAAAG  750

seq1  CAGCACTG-TTTAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAA  793
      |||||||| ||||||||||||||||||||||||||||| |||||| || |
seq2  CAGCACTGTTTTAAAATAAAATAAAATAAAATAAAATATAATAAATTACA  800

seq1  ATAAAAAGATTAAAAACAGAAAACCCCTTACA-GGATACTATGA-GTTAA  841
      ||||| ||||||| |||||||||||||| ||| ||||||||||| |||||
seq2  ATAAATAGATTAATAACAGAAAACCCCTCACAGGGATACTATGAGGTTAA  850

seq1  GAACCCTC-TAAAGATG-TTGATCTTTGTTTTCTGCTAGCCATC  883
      |||||||| |||||||| ||||||||||||||||||||| ||||
seq2  GAACCCTCTTAAAGATGTTTGATCTTTGTTTTCTGCTAGTCATC  894