BAC Information

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BAC

Clone NameB6Ng01-324D15
Chromosome4 (Build37)
Map Location 16,924,878 - 16,926,009
singlet/doubletsinglet
Overlap genenone
Upstream geneOsgin2, Ripk2, LOC667150, LOC383994, LOC100040154
Downstream geneLOC667212, LOC100040173, Mmp16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324D15.bB6Ng01-324D15.g
ACCGA112596GA112597
length1,2371,139
definitionB6Ng01-324D15.b B6Ng01-324D15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttgatagctgagtagcattccactgtgtgaatgtacc
acattttctatatccattcctctgttgagggacatctggcttcttttcag
ctcctggctattataaataaagctgctacgaacatagtgtagcatgtgtc
cttattacatattagagcatctgctgggtatattcccaggagtggtgtta
gtaggtccttaggtagtactatgtctgattttctgaggaagtaccaaact
gttttccagagtggttgttccagcttgcagtcccaccagcaaagtaggag
tgttcctctttctccacatcctcaccagcatctgctgttacctaagcttt
tgatcttagccattctgactgatgtgaggtggaatctcacggtcattttg
acttgcatttccctgatgactaaggatgctgaacatttctttaggtgctt
ctcagtcattcagtattcctcagttgagaattctttgtttagctctgtac
cccatttttaaatagggttaagggctggtgagatggctcagtgggtaaga
gcacccgactgctcttccaaaggtccggagttcaaatcccagcaatcaca
tggtggctcacaaacatccgtaatgagatctgactcccttttctggagtg
tctgaagacagctatagtgtacttacatataataaataaataaataaatt
taaatagggttatttggttctctggagtctaacttgttgagttctttgca
tatatttgatattaaccctcgatcagatttagtattggtaaagatctttt
cccaatttgttgtttgccattttgttctattgacagtatcctttgtctta
cagaagctttgtaattttataaggtcccatttgtcaattcttgatcttag
agcctaggctactggtgttctgttcaggaaaatttcccctgtgccctctg
cttgaggctctttaaccactttctttctgttagtttcagtgtatctggtt
ttatgtggaggtccttgatccactttgaacttgaccttgtacagaagaat
aagaactgaatttcagtcttctgcatgctaaacacctagttgaaacaggc
ctctgttttgtgaaagctgttcttttttttctcccatgggtggtttaagc
ctctcttttgcaagaatcaaggtaaatgtaagagttgatggtgtggttcc
attctcggactctctctcagattactaatctccatag
gaattccttttgcattggtcatttattgctaagcatgggacctaattaga
gtttcttgttatgataagactcctttgtagacaactaaatttttgtttgt
aaaacatgatcagtaagagacaactttggcttttcagttagtggtaaaga
tatatgtccactttactcagttaaatgtcccaacattacgacaacatttt
tttttctaatccagtccaggttggaaagaagtctccttagtgtcagatta
agccccatctcttaacaatatggacagatgagtgtgccatggccatgaga
tatttcataatgcagaaggaatttgttgttactttttggattgtactctt
ctaggctggaccgaattcataagcagattgaagtaagacctgttctttac
agatggtattttaatagatactggagtttgtctgtattatatctgtgccc
cttcttttaagaacaatgttacattatgttcctttggaaaaactgtgatt
tgacaactgatttcaataaaaatatttgcctctcttaaaaaaaataattc
ctcatctgatgaatactggtgcaggtcatatgactgaagcctcagtataa
gtgaggtcatgtgaatgtcagttgtactgtgttttggggttttattagat
attttctttatttacatttcaaatgttattccccattcctagtttcccct
tagaaaaccctctatccctctcccctcttcccctgctcaccaacccaccc
actccctcttcctggccctgcaagttccctatactggggcatacaacctt
cacaggaccaagggcttttcctcccactgatgaccaactaggcaatcatc
tgctatatatgcagctagaaccatgagtcccaccatgtgttttctttgaa
tggtggtttagttccagggagctctggaaatactgggttagttcatattg
ttgtcctcttaggtgataacaaaccctttcagcttcttgggttcttctct
agccttcttctttgggtaccctggtgctctgtcaatgggatggctgtgaa
catcatgtcctctatttgttcaagcactggcagagtctctcaggaagaca
gaaatatattcatgctcttgttcaacaagctcgtgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16924878_16926009
seq2: B6Ng01-324D15.g_65_1203 (reverse)

seq1  CCAACACGAGCTTGTTG-ACAAGAGCATG---ATATATCTGTC-TCCTGA  45
      | ||||||||||||||| |||||||||||   |||| |||||| ||||||
seq2  CAAACACGAGCTTGTTGAACAAGAGCATGAATATATTTCTGTCTTCCTGA  50

seq1  GAGGCTCTGCCAGTGCTTG-ACAAATAGA-GACATGGATGTTCACAGCCA  93
      ||| ||||||||||||||| ||||||||| ||||| ||||||||||||||
seq2  GAGACTCTGCCAGTGCTTGAACAAATAGAGGACAT-GATGTTCACAGCCA  99

seq1  TCCATTGGACAGAGCA-CAGGGTACCCAAAGAAGAA-GCTAGAGAAAGAA  141
      |||  | ||||||||| ||||||||||||||||||| ||||||| |||||
seq2  TCCCATTGACAGAGCACCAGGGTACCCAAAGAAGAAGGCTAGAG-AAGAA  148

seq1  CCCAAGAAGCTGAAGGGGTTTGTAATCACCTAGGAGGAACAACAATATGA  191
      |||||||||||||| |||||||| |||||||| |||| ||||||||||||
seq2  CCCAAGAAGCTGAAAGGGTTTGTTATCACCTAAGAGG-ACAACAATATGA  197

seq1  ACTAA-CCAGTATTTCCAGAGCTCCCTGGAACTAAACCACCATTCAAAGA  240
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACCCAGTATTTCCAGAGCTCCCTGGAACTAAACCACCATTCAAAGA  247

seq1  AAACACATGGTGGGACTCATGGTTCTAGCTGCATATATAGCAGATGATTG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATGGTGGGACTCATGGTTCTAGCTGCATATATAGCAGATGATTG  297

seq1  CCTAGTTGGTCATCAGTGGGAGGAAAGCCCCTTGGTCCTGTGAAGGTTGT  340
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  CCTAGTTGGTCATCAGTGGGAGGAAAAGCCCTTGGTCCTGTGAAGGTTGT  347

seq1  ATGCCCCAGTATAGGGAACTTGCAGGGCCAGGAAGAGGGAGTGGGTGGGT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCAGTATAGGGAACTTGCAGGGCCAGGAAGAGGGAGTGGGTGGGT  397

seq1  TGGTGAGCAGGGGAAGAGGGGAGAGGGATAGAGGGTTTTCTAAGGGGAAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGCAGGGGAAGAGGGGAGAGGGATAGAGGGTTTTCTAAGGGGAAA  447

seq1  CTAGGAATGGGGAATAACATTTGAAATGTAAATAAAGAAAATATCTAATA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAATGGGGAATAACATTTGAAATGTAAATAAAGAAAATATCTAATA  497

seq1  AAACCCCAAAACACAGTACAACTGACATTCACATGACCTCACTTATACTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCAAAACACAGTACAACTGACATTCACATGACCTCACTTATACTG  547

seq1  AGGCTTCAGTCATATGACCTGCACCAGTATTCATCAGATGAGGAATTATT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCAGTCATATGACCTGCACCAGTATTCATCAGATGAGGAATTATT  597

seq1  TTTTTTAAGAGAGGCAAATATTTTTATTGAAATCAGTTGTCAAATCACAG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAGAGAGGCAAATATTTTTATTGAAATCAGTTGTCAAATCACAG  647

seq1  TTTTTCCAAAGGAACATAATGTAACATTGTTCTTAAAAGAAGGGGCACAG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCAAAGGAACATAATGTAACATTGTTCTTAAAAGAAGGGGCACAG  697

seq1  ATATAATACAGACAAACTCCAGTATCTATTAAAATACCATCTGTAAAGAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATACAGACAAACTCCAGTATCTATTAAAATACCATCTGTAAAGAA  747

seq1  CAGGTCTTACTTCAATCTGCTTATGAATTCGGTCCAGCCTAGAAGAGTAC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTTACTTCAATCTGCTTATGAATTCGGTCCAGCCTAGAAGAGTAC  797

seq1  AATCCAAAAAGTAACAACAAATTCCTTCTGCATTATGAAATATCTCATGG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAAAAGTAACAACAAATTCCTTCTGCATTATGAAATATCTCATGG  847

seq1  CCATGGCACACTCATCTGTCCATATTGTTAAGAGATGGGGCTTAATCTGA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCACACTCATCTGTCCATATTGTTAAGAGATGGGGCTTAATCTGA  897

seq1  CACTAAGGAGACTTCTTTCCAACCTGGACTGGATTAGAAAAAAAAATGTT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGGAGACTTCTTTCCAACCTGGACTGGATTAGAAAAAAAAATGTT  947

seq1  GTCGTAATGTTGGGACATTTAACTGAGTAAAGTGGACATATATCTTTACC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTAATGTTGGGACATTTAACTGAGTAAAGTGGACATATATCTTTACC  997

seq1  ACTAACTGAAAAGCCAAAGTTGTCTCTTACTGATCATGTTTTACAAACAA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTGAAAAGCCAAAGTTGTCTCTTACTGATCATGTTTTACAAACAA  1047

seq1  AAATTTAGTTGTCTACAAAGGAGTCTTATCATAACAAGAAACTCTAATTA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGTTGTCTACAAAGGAGTCTTATCATAACAAGAAACTCTAATTA  1097

seq1  GGTCCCATGCTTAGCAATAAATGACCAATGCAAAAGGAATTC  1132
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCATGCTTAGCAATAAATGACCAATGCAAAAGGAATTC  1139