BAC Information

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BAC

Clone NameB6Ng01-330O08
Chromosome4 (Build37)
Map Location 22,325,998 - 22,326,737
singlet/doubletsinglet
Overlap geneFbxl4
Upstream genePrdm13, Ccnc, 2610029I01Rik, Usp45, 4930528A17Rik, 5730406M06Rik, Coq3, 6230409E13Rik, LOC100040379
Downstream genePou3f2, LOC664911, 1700025O08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330O08.g
ACCGA117416
length741
definitionB6Ng01-330O08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagtaatataattagcagaagaaatagaactgtaggagatccag
atcagggagtcacgggagaagcatctgagtcttaagaactgtgcctgttg
tgaaacaccacagacaatgacactaataagataggctatttgaatttaga
gtttaaaaggaatgggtgcctttaagaagagctgaaaacgattacaggag
acaagcaagtcatgcggaaatgtgtgggctactgggactttttcagtatt
taaagcaaatcaggaacaaccaaatttttttgtttaaaggggagaggtac
tggcaagatggttcaatcagataaaagttctagctgcattatcctaatta
cttgatttccatccccagagccagcaaaaaggcagaaagaaaactgactc
cacaaaatcactttctgaatacacacacatgcacatgaatttttcaaaga
ctaaaactttgctcaccaaagtttaacttatatttttaatgtttgagggg
tgcttccatctttctgaactgttttcatatcgtcggtgttcaaaaccatg
aggcaatatggtgggtactgttcaagtctgcctttgatagcagagaaaat
gctgaggtgtgggtatggtggtttgaataaaaatggcacccatagactcc
tatatttgaatgcttggtcattagggagtgccactacttgacaggattag
gaagtatggcctttgttggaggaagtgtgtgtggtggtttg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_22325998_22326737
seq2: B6Ng01-330O08.g_71_811

seq1  GAATTCAAGTAATATAATTAGCAGAAGAAATAGAACTGTAGGAGATCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAATATAATTAGCAGAAGAAATAGAACTGTAGGAGATCCAG  50

seq1  ATCAGGGAGTCACGGGAGAAGCATCTGAGTCTTAAGAACTGTGCCTGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGAGTCACGGGAGAAGCATCTGAGTCTTAAGAACTGTGCCTGTTG  100

seq1  TGAAACACCACAGACAATGACACTAATAAGATAGGCTATTTGAATTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACACCACAGACAATGACACTAATAAGATAGGCTATTTGAATTTAGA  150

seq1  GTTTAAAAGGAATGGGTGCCTTTAAGAAGAGCTGAAAACGATTACAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAAGGAATGGGTGCCTTTAAGAAGAGCTGAAAACGATTACAGGAG  200

seq1  ACAAGCAAGTCATGCGGAAATGTGTGGGCTACTGGGACTTTTTCAGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAAGTCATGCGGAAATGTGTGGGCTACTGGGACTTTTTCAGTATT  250

seq1  TAAAGCAAATCAGGAACAACCAAATTTTTTTGTTTAAAGGGGAGAGGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAAATCAGGAACAACCAAATTTTTTTGTTTAAAGGGGAGAGGTAC  300

seq1  TGGCAAGATGGTTCAATCAGATAAAAGTTCTAGCTGCATTATCCTAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGATGGTTCAATCAGATAAAAGTTCTAGCTGCATTATCCTAATTA  350

seq1  CTTGATTTCCATCCCCAGAGCCAGCAAAAAGGCAGAAAGAAAACTGACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTCCATCCCCAGAGCCAGCAAAAAGGCAGAAAGAAAACTGACTC  400

seq1  CACAAAATCACTTTCTGAATACACACACATGCACATGAATTTTTCAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATCACTTTCTGAATACACACACATGCACATGAATTTTTCAAAGA  450

seq1  CTAAAACTTTGCTCACCAAAGTTTAACTTATATTTTTAATGTTTGAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACTTTGCTCACCAAAGTTTAACTTATATTTTTAATGTTTGAGGGG  500

seq1  TGCTTCCATCTTTCTGAACTGTTTTCATATCGTCGGTGTTCAAAACCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCATCTTTCTGAACTGTTTTCATATCGTCGGTGTTCAAAACCATG  550

seq1  AGGCAATATGGTGGGTACTGTTCAAGTCTGCCTTTGATAGCAGAGAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATATGGTGGGTACTGTTCAAGTCTGCCTTTGATAGCAGAGAAAAT  600

seq1  GCTGAGGTGTGGGTATGGTGGTTTGAATAAAAATGGCACCCATAGACTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGTGTGGGTATGGTGGTTTGAATAAAAATGGCACCCATAGACTCC  650

seq1  TATATTTGAATGCTTGGTCATTAGGGAGTGCCACTACTTGACAGGATTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGAATGCTTGGTCATTAGGGAGTGCCACTACTTGACAGGATTAG  700

seq1  GAAGTATGGCC-TTGTTGGAGGAAGTGTGTGTGGTGGTTTG  740
      ||||||||||| |||||||||||||||||||||||||||||
seq2  GAAGTATGGCCTTTGTTGGAGGAAGTGTGTGTGGTGGTTTG  741


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