BAC Information

Click to search

BAC

Clone NameB6Ng01-343M02
Chromosome4 (Build37)
Map Location 45,816,886 - 45,817,774
singlet/doubletsinglet
Overlap geneAldh1b1
Upstream geneZcchc7, D4Wsu132e, Grhpr, Zbtb5, 1700055D18Rik, Polr1e, Fbxo10, 1110019J04Rik, Frmpd1, Rg9mtd3, Exosc3, LOC666325, Wdr32, Mcart1, Shb, LOC100040140, LOC100040557, Gm829, LOC100040567, LOC100040580
Downstream geneIgfbpl1, 1300002K09Rik, Tdrd7, Tmod1, BC057893, AU014645, Xpa, LOC624430, LOC666379, LOC666389, Foxe1, 5830415F09Rik, Hemgn, LOC100040643, Anp32b, Nans, Trim14, Coro2a, Tbc1d2, Gabbr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343M02.bB6Ng01-343M02.g
ACCGA126453GA126454
length484890
definitionB6Ng01-343M02.b B6Ng01-343M02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcacagagagaaagggctcctacaaagggaaaggcttcctgtagaagaaa
aggatgccgtggagggaagggttccacagtgttggggattggttctaatg
ctttgagtccattgggaatcttcgcgtccaagcactaaaggtccttgtcc
ttaattgttttatgattgatcaataaagaagctggtggccaatggctgag
cagagagagccagggcaggatgcctacggtggtgcgggctaggacacaga
gggggaagagaaagagaaatcgccacgaagcggtaggatacggatgcgga
tgcagatggacgtaggagctgcaggagataagtccaaccagccatgtgag
agatttcgggtaagtgaccactggccatttccccaattgggcctagggta
gcaggtggaggattagaagtgcccagccattgagctaggcagcatattaa
aaataagcttgtgtgtgtgtgtgtgtgtgtgtgt
gaattcctgagattggccatcttggaggcccagccctgtcctgcagctcc
gtgacatctagccagtggagggcaaaatctgatttcagcctgagttccca
gtgaagtgttacaagaagtgtcaaccaataaagtagtccagccagagctt
ttctacttaaagcagagacggtggctgggcccagagtgcagcccatttca
tccctcggtcccacctctctgatgagttatagccaagaagccttaggagt
ctccataaggcatattcaaaaccactgactggccataaaaaggagtgatg
ggctgatcccggggccacagggatcctcaaaaacagaacgatcagtgaag
gacgccggccccacatcgatcagtgtttggctgggacccgggggagggga
atggggaaggaccactcgtggatgtggggctcctcttgggggaggttttg
aaaatgttgtggaattgggcaatggacacagttggacaactttgcagtca
tactgatttactatcaaattatgcacttaattaaggtatgggaattaatt
tcacttgaaaattaaaataagctcagtgtcctatttgcaaatctgtatca
ctgttttcctttacgctgaacactttactgtctctggcccagacaggacc
catcgagtaattgctacctcctccccacccccgcccccaactccctccca
tgtttccaggtttctttttgatttctcttggctgatgactaagtacaaag
actcatgggaaatgctatactttcctgcccaggggacgtctgtatgtgtc
atttagggacttccactgtcaccctcctaacctctactgaatcacctcat
caggaggcctttgctagcttcgaacctcagagtacacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_45816886_45817774
seq2: B6Ng01-343M02.g_67_956

seq1  GAATTCCTGAGATTGGCCATCTTGGAGGCCCAGCCCTGTCCTGCAGCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAGATTGGCCATCTTGGAGGCCCAGCCCTGTCCTGCAGCTCC  50

seq1  GTGACATCTAGCCAGTGGAGGGCAAAATCTGATTTCAGCCTGAGTTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATCTAGCCAGTGGAGGGCAAAATCTGATTTCAGCCTGAGTTCCCA  100

seq1  GTGAAGTGTTACAAGAAGTGTCAACCAATAAAGTAGTCCAGCCAGAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTGTTACAAGAAGTGTCAACCAATAAAGTAGTCCAGCCAGAGCTT  150

seq1  TTCTACTTAAAGCAGAGACGGTGGCTGGGCCCAGAGTGCAGCCCATTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTAAAGCAGAGACGGTGGCTGGGCCCAGAGTGCAGCCCATTTCA  200

seq1  TCCCTCGGTCCCACCTCTCTGATGAGTTATAGCCAAGAAGCCTTAGGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCGGTCCCACCTCTCTGATGAGTTATAGCCAAGAAGCCTTAGGAGT  250

seq1  CTCCATAAGGCATATTCAAAACCACTGACTGGCCATAAAAAGGAGTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATAAGGCATATTCAAAACCACTGACTGGCCATAAAAAGGAGTGATG  300

seq1  GGCTGATCCCGGGGCCACAGGGATCCTCAAAAACAGAACGATCAGTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGATCCCGGGGCCACAGGGATCCTCAAAAACAGAACGATCAGTGAAG  350

seq1  GACGCCGGCCCCACATCGATCAGTGTTTGGCTGGGACCCGGGGGAGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCCGGCCCCACATCGATCAGTGTTTGGCTGGGACCCGGGGGAGGGGA  400

seq1  ATGGGGAAGGACCACTCGTGGATGTGGGGCTCCTCTTGGGGGAGGTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGAAGGACCACTCGTGGATGTGGGGCTCCTCTTGGGGGAGGTTTTG  450

seq1  AAAATGTTGTGGAATTGGGCAATGGACACAGTTGGACAACTTTGCAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTGTGGAATTGGGCAATGGACACAGTTGGACAACTTTGCAGTCA  500

seq1  TACTGATTTACTATCAAATTATGCACTTAATTAAGGTATGGGAATTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATTTACTATCAAATTATGCACTTAATTAAGGTATGGGAATTAATT  550

seq1  TCACTTGAAAATTAAAATAAGCTCAGTGTCCTATTTGCAAATCTGTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGAAAATTAAAATAAGCTCAGTGTCCTATTTGCAAATCTGTATCA  600

seq1  CTGTTTTCCTTTACGCTGAACACTTTACTGTCTCTGGCCCAGACAGGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTCCTTTACGCTGAACACTTTACTGTCTCTGGCCCAGACAGGACC  650

seq1  CATCGAGTAATTGCTACCTCCTCCCCACCCCCGCCCCCAACTCCCTCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGAGTAATTGCTACCTCCTCCCCACCCCCGCCCCCAACTCCCTCCCA  700

seq1  TGTTTCCAGGTTTCTTTTTGATTTCTCTTGGCTGATGACTAAGTACAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCAGGTTTCTTTTTGATTTCTCTTGGCTGATGACTAAGTACAAAG  750

seq1  ACTCATGGGAAATGCTATAC-TTCCTGCCCAGGGGACGTCTGTATGTGTC  799
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACTCATGGGAAATGCTATACTTTCCTGCCCAGGGGACGTCTGTATGTGTC  800

seq1  ATTTAGGGACTTCCACTGTCACCCTCCTAACCTCTACTGAATCACCTCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGGACTTCCACTGTCACCCTCCTAACCTCTACTGAATCACCTCAT  850

seq1  CAGGAGGCCTTTGCTAGCTTCGAACCTCAGAGTACACACA  889
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGCCTTTGCTAGCTTCGAACCTCAGAGTACACACA  890