BAC Information

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BAC

Clone NameB6Ng01-348H24
Chromosome4 (Build37)
Map Location 4,526,831 - 4,527,721
singlet/doubletsinglet
Overlap genenone
Upstream geneTgs1, Lyn, LOC621858, Rps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik, LOC100039297, LOC622019
Downstream geneImpad1, LOC100039338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348H24.bB6Ng01-348H24.g
ACCGA129780GA129781
length1,170979
definitionB6Ng01-348H24.b B6Ng01-348H24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttacctttgagtcccattttttaatggggttctttgatt
ttctggagtccaccttcttcagttctttatatatattggatattagtctc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttttgacggtgtcttttgcttacagaagctttgcaattttatga
ggtcccatttgtcaattcttgatcttacagcacaagccattgttgttcta
ttcaggaatttttcccggtgcccatatctttgaggcttttctccactttc
tcctctataagtttaactgtctctggttttatgtgaaattccttgatcca
cttagatttgaccttagtacagggagataggaatggatcagttcacattc
ttctacatgataaccaccagttttgccatcaccatttgttgagaatgctg
tatttttggatggttttagctcccttgtcaaagttcaaatgacaatagtt
gtgtggattcatttctgggttttcaattctattccattggtctacttgtc
tgtcgcaataccagcaccatgcagtttttttcacaattgctctgtagtac
agctttaggtcaggcatggtgattccaccagaggttcttttatccttgag
aagagtttttgctattctaggttttttgttattccagatgaatttgcaga
ttgccccttgtaattctttgaagaattgagttggaattttgatggaggtt
gcattaaatctgtacattgcttttggcaagatagccatttttactatact
gatcctgccaatccatgagcatggggagatcttccatcttctgagatctt
ctttaatttctttctttcagaagacgtgaagttttatcatacagatcttt
tcactttctttagtagagtcactccgaagattattttatattatttgtga
ctattgaagaagggttgttgtttccctaattttctttcttagcctgttat
tcctttgtgtagaagaaaggccattgacttggtttggagttaccctttat
attccagcctactttcacagaagcttgtttatcaaggtttagaagttcct
ctgggaaattttaggtcaccttaatatgaaccattcattatcactctggc
aaaagggagatatttttgat
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatcctcaatcatcagggaaatgcaaatcaaaacaaccctgagat
gccggaaatgcaaatcaaaacaaccctgagatgccacctcataccagtca
gaatggctaagatcaaaatctcaggtgacagcagatgctggagaggatat
ggagaaagaggaacactcctccattgctggtgggattgaaagtttgtaca
accactctggaaatcagtctggcggttcctcagaaaattggacatagtgc
taccggaggatcccgcaatacccctcctgggcatatacccagaagatgtt
ccaactggtaagaaagacacatgctccactatattcatagcagccttatt
tataatagccagaagttggaaggaacccagatacccctcaacagaggaat
ggatacagaaaatgtggtacctttacacaatggtagttgattttaaagta
tgttttaccagagttaggctaataatttgtcagaactccattgattaatg
tttgaactctgaagttttgaagtcctaatttaacagtcaatccttatatt
taccaattttaaaacaccttcctagaccctaatattttttttatcccaat
tacttacactttttatatcctaaaaccttacataaacttgaaatctgaaa
cctatattttcctttctcacgaagcctctgagaaaggctgtttgtttttc
taataagagatctggtagcctgaactggctaatgacttgtctaatgagct
agcacagtgatggattacctttgagataaaaagcttattgcttgttctcc
tagctgtcatgctatggttagcatagctgtcaatgtgagtaagagaccct
gagaagggatgaattataattctagatgtcatatatttaatttaaagaag
aaagaagtttagttctatattacactttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_4526831_4527721
seq2: B6Ng01-348H24.g_139_1042

seq1  AAATGCAAATCAAAACAACCCTGAGATGCCGGAAATGCAAATCAAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAAATCAAAACAACCCTGAGATGCCGGAAATGCAAATCAAAACAA  50

seq1  CCCTGAGATGCCACCTCATACCAGTCAGAATGGCTAAGATCAAAATCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGATGCCACCTCATACCAGTCAGAATGGCTAAGATCAAAATCTCA  100

seq1  GGTGACAGCAGATGCTGGAGAGGATATGGAGAAAGAGGAACACTCCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGCAGATGCTGGAGAGGATATGGAGAAAGAGGAACACTCCTCCA  150

seq1  TTGCTGGTGGGATTGAAAGTTTGTACAACCACTCTGGAAATCAGTCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGTGGGATTGAAAGTTTGTACAACCACTCTGGAAATCAGTCTGGC  200

seq1  GGTTCCTCAGAAAATTGGACATAGTGCTACCGGAGGATCCCGCAATACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTCAGAAAATTGGACATAGTGCTACCGGAGGATCCCGCAATACCC  250

seq1  CTCCTGGGCATATACCCAGAAGATGTTCCAACTGGTAAGAAAGACACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGGCATATACCCAGAAGATGTTCCAACTGGTAAGAAAGACACATG  300

seq1  CTCCACTATATTCATAGCAGCCTTATTTATAATAGCCAGAAGTTGGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTATATTCATAGCAGCCTTATTTATAATAGCCAGAAGTTGGAAGG  350

seq1  AACCCAGATACCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGATACCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACCTT  400

seq1  TACACAATGGTAGTTGATTTTAAAGTATGTTTTACCAGAGTTAGGCTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATGGTAGTTGATTTTAAAGTATGTTTTACCAGAGTTAGGCTAAT  450

seq1  AATTTGTCAGAACTCCATTGATTAATGTTTGAACTCTGAAGTTTTGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTCAGAACTCCATTGATTAATGTTTGAACTCTGAAGTTTTGAAGT  500

seq1  CCTAATTTAACAGTCAATCCTTATATTTACCAATTTTAAAACACCTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTTAACAGTCAATCCTTATATTTACCAATTTTAAAACACCTTCCT  550

seq1  AGACCCTAATATTTTTTTTATCCCAATTACTTACAC-TTTTATATCCTAA  599
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGACCCTAATATTTTTTTTATCCCAATTACTTACACTTTTTATATCCTAA  600

seq1  AACCTTACATAAACTTGAAATCTGAAACCTATA-TTTCCTTTCTCACGAA  648
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AACCTTACATAAACTTGAAATCTGAAACCTATATTTTCCTTTCTCACGAA  650

seq1  GCCTCTGAGAAAGGCTGTTTGTTTTTCTAATAAGAGATCTGGTAGCCTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGAGAAAGGCTGTTTGTTTTTCTAATAAGAGATCTGGTAGCCTGA  700

seq1  ACTGGCTAATGACTTGTCTAATGAGCTAGCACAGTGATGGATTACC-TTG  747
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACTGGCTAATGACTTGTCTAATGAGCTAGCACAGTGATGGATTACCTTTG  750

seq1  AGATAAAAAGCTTATTGCTTGTTCT-CTAGCTGTCATGCTATGGTTAGCA  796
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGATAAAAAGCTTATTGCTTGTTCTCCTAGCTGTCATGCTATGGTTAGCA  800

seq1  TAGCTGTCAATGTGAGT-AGAGA-CCTGAGAA-GGATGAATTATAA-TCT  842
      ||||||||||||||||| ||||| |||||||| ||||||||||||| |||
seq2  TAGCTGTCAATGTGAGTAAGAGACCCTGAGAAGGGATGAATTATAATTCT  850

seq1  AGATGTCATATA-TTAATT--AAAAAGAAAGAAG-TTAG-TCTATATTAC  887
      |||||||||||| ||||||  || |||||||||| |||| ||||||||||
seq2  AGATGTCATATATTTAATTTAAAGAAGAAAGAAGTTTAGTTCTATATTAC  900

seq1  ACTT  891
      ||||
seq2  ACTT  904