CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAATAGAGATGCCAGAATGTTGGAGAGAGTCATCAAGGAAGCCAGAC
AAAGAGAGAGTCATGTAGGGCACAAACAGCAGAGCTGCAAGGGCTGGGAT
GCCTAATCTTGTTGGAGCCCTCTGGTTCCATTATGAGCTCCAGACATTGG
AGGTACAGTGGTAGGGTTTGGTCTTTACCTTGTGTGTTTTGGTTTTGCTT
TGGTCCTGCTTTCTCCGCCTCATTCTTCTCTTTTAGAACAAGGATGTTTA
TTCTGGACCATTACATACTGGAAATATGTAAGTTGTATTTTGATTTTACA
GTAACTCATAGTTAAGAGGCTGCCTTGAGTCTCAGAAGAGACCTTGTCCT
TTTGGGCAATGTTGACACTGCTAAAGATCACAGGGACTTCGACGTTGGAC
TAAATGCTCTTGTATTAGGAGTTGGCTGTGAACCTAGCAGGGACAGGATG
GCATGTTGCAGCTTGAATGTGAAAAGTCTTCCATATGCTCATGTGTTTAA
TTACACACTCGGTCCCCTGTTAGTACAGTCTTGGAAGGTTGTGGAACTTT
TAGGAAGCATAGCCTCTTTGCCACCACTATGATGTACTCTAACCCTCGCC
ACTTTTATTTTCTGTCTCTCCCTCCCATGGACTCTCTATCGGCCTTCTTG
GAATGCCCAATCCG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTCTCATGTGCTGAGGCATGCAAG
CATGCTTGCGTGCGTGCGTGCGTGCACACACACATATACACATTAAACAG
ATGTAATTTTTTAAAATGTGAGTTTACAAAGGAAAAGAAAGAAAACGTTC
TTAACGTCCAGGCACCAGGTAGGTTATTTCCCAAATGCATCAGGTAGTTA
TTATACCTTTAAGGTGGAATTGTGAGACCTCTTTTAAAGAAAATGACATC
GAGCTAACATTCAAACACAAGTCTCTTGAGCTCCAAAGCCCAGTGCTTTC
TACTCTGCCAGAACATATAATATGGTGACAGGTGTGATACTGTGATTTTC
CTTTGAACATTTCTAAAACACCCCATAAAAACATGTTTTTATTATTTCAA
GGGTCATAGCACTGAACTAGACGAAAAACACAGGACCCAGAGCTGGGGAA
AGAAACTAAGGCCAGAATTGCAGGGATGGGCGGCTCAGTACCAGAGTACT
TACTTGCCTGATGCGCAGGAGACTATGAGGCCAGCTCAGAGGAGGGATCA
GTCTGAGAGGCAGAATGGAATGGAAGGCTAAATCTACGTGAATAACCTCC
GACAGTTCAAGTATATATTTTCCATAGCTTTTTTTTTTGTTTTCTTTTTA
CTTTTTGAGN

Query= MSMg01no047_d04.g1 MSMg01no047_d04.g1 CHROMAT_FILE:
MSMg01no047_d04.g1 PHD_FILE: MSMg01no047_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:30 2005
         (598 letters)



>mm_chr4_97739183_97740180
          Length = 998

 Score = 1071 bits (554), Expect = 0.0
 Identities = 586/602 (97%), Gaps = 11/602 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttctcatgtgctgaggcatgcaagcatgct----tgcgtgcgtgcgtgcgtgcacacaca 56
           ||||||||||||||||||||||||||||||    ||||||||||||||||||| ||||||
Sbjct: 197 ttctcatgtgctgaggcatgcaagcatgcttgcgtgcgtgcgtgcgtgcgtgcgcacaca 256

                                                                       
Query: 57  catatacacattaaacagatgtaattttttaaaatgtgagtttacaaaggaaaagaaaga 116
           ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 257 catatgcacattaaacagatgtaattttttaaaatgtgggtttacaaaggaaaagaaaga 316

                                                                       
Query: 117 aaacgttcttaacgtccaggcaccaggtaggttatttcccaaatgcatcaggtagttatt 176
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aaatgttcttaacgtccaggcaccaggtaggttatttcccaaatgcatcaggtagttatt 376

                                                                       
Query: 177 atacctttaaggtggaattgtgagacctcttttaaagaaaatgacatcgagctaacattc 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atacctttaaggtggaattgtgagacctcttttaaagaaaatgacatcgagctaacattc 436

                                                                       
Query: 237 aaacacaagtctcttgagctccaaagcccagtgctttctactctgccagaacatataata 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaacacaagtctcttgagctccaaagcccagtgctttctactctgccagaacatataata 496

                                                                       
Query: 297 tggtgacaggtgtgatactgtgattttcctttgaacatttctaaaacaccccataaaaac 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tggtgacaggtgtgatactgtgattttcctttgaacatttctaaaacaccccataaaaac 556

                                                                       
Query: 357 atgtttttattatttcaagggtcatagcactgaactagacgaaaaacacaggacccagag 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atgtttttattatttcaagggtcatagcactgaactagacgaaaaacacaggacccagag 616

                                                                       
Query: 417 ctggggaaagaaactaaggccagaattgcagggatgggcggctcagtaccagagtactta 476
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 617 ctggggaaagacactaaggccagaattgcagggatgggcggctcagtaccagagtactt- 675

                                                                       
Query: 477 cttgcctgatgcgcaggagactatgaggccagctcagaggagggatcagtctgagaggca 536
              |||||||||||||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ---gcctgatgcgcag---actatgaggccagctcagaggagggatcagtctgagaggca 729

                                                                       
Query: 537 gaatggaatggaaggctaaatctacgtgaataacctccgacagttcaagtatatattttc 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gaatggaatggaaggctaaatctacgtgaataacctccgacagttcaagtatatattttc 789

             
Query: 597 ca 598
           ||
Sbjct: 790 ca 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space:   580944
Effective search space used:   580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)