BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-048E20.T7 (MSMg01no048_e20.b1) | MSMg01-048E20.TJ (MSMg01no048_e20.g1) |
ACC | AG278102 | AG278103 |
length | 1,250 | 1,326 |
length of high quality (start - end) | 771 (77 - 847) | 230 (67 - 296) |
definition | CHROMAT_FILE: MSMg01no048_e20.b1 PHD_FILE: MSMg01no048_e20.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:09:05 2005 | CHROMAT_FILE: MSMg01no048_e20.g1 PHD_FILE: MSMg01no048_e20.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:09:05 2005 |
singlet/doublet | doublet | doublet |
---|
BLAST hit | unique | unique |
---|
Map location. | (16,374,102 - 16,374,871) | (16,500,994 - 16,501,216) |
---|
sequence | NNNTTAACATTGGGCGCTATAGACTCCTATAGGGAGAGGATCCGCGGAAT
TCACTTTTGCCAATAATACCTATTTTAAAAGCCTAATATAACTAATTAAG
ATTTTCTTGGTCAAAATCTCCATGTTACACCATGTTATCTGAGGAAGTTA
TCCCGGAATTTCTTCCTCCACTTCTATTAATACAGCTTCAGAACCTACTT
GGGATGCATAATTTATTTCAGCTCAATCTTGGAAATGTATAAGCAAAATA
TAAAACATCTAATTTTGTTTGAAACTTTTCAGGGGCATGCACATTGTCCC
CATATGCTTGACTCTTTGATTATTAATTCATCTCAGTTTCATTCACAGAA
AAGTAAAGCATTACAAGTAGCTTTGGAGTCTTTTTCTTTGCATTTTTAGA
TTTATTTCATTAGCATCTTTATGCACAACAGTCATTTGTTTCAATGTTTT
TCATGCTTAAATGGAAAAGCTTTCATTGGAAATGAATTTTTAAAAAAGTA
GGTTCAATGATCTATGTGAAATAAATGATCTCAGTGCTTATCTTCATAGA
GAAGCCACTCATGAGTTATCGTTCTCATTTGTAATGATAGATAACATAGC
TCAAGGATACATCACAAATTCTCTGAAAATGTACCCTGTCTGTATAAATG
CATTTACCTATATGAAAAAAATGAGTTACTTTTTAAATAAATATTTGAAA
GTCGGTATAGTCTAGAAACAATANAGTTAGAGATGGTCAAATTGTGATTT
ATGTCCCACCCAAAATATAATTCAGTCAGCCAGAGTGACTTAACTTAGGA
AATTCCTTCTCTGCTTACTAGTCTAATTAGCATGTTTCAGTACATCCAGT
AACAGTTTGGGATGAAGATGACCTCTGTCAGCTGGTATCCTAGAAGCAAA
TACTTCAGATCTATGTTATCGAAAGGAAAAGGGTATATTTCATTGTCATC
TCTTAAAAAGCTTCTTTTAATGGAAACTTTTTTCACAAGCACTTGTTTGA
TGCAATTTAAAGGGAATTCTGTTTAGAAAAACTTTGTTTCTGGAAAAATT
AAAATTGACCCCTCTCTTTTTTTTGTTTCTATGGGGTTACTTATGAAAAT
AATTTTTTGTTTTTTTTTAAAGAATTATCCCCTCTGCAAAATTTATAATT
TCTATTTCTTTCTCTTAAAAAAAATTCCTTTATAATTCTTTATGTAAAAA
CAAATACTCTTTCTAATTTTTCTTTGATTATTCTTATTATTGTTTTAATA
| TTTTTAACAAGGTAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCCTCTAAATTTGTCTTTGTTGAGAGGGTGTTTTT
ACTCTTGGCTTCTGTTTCCTGTCCGCATTTTCAGAGTGTGTTGAGTATGT
GTTGCTGGTTTTTCTGGTCTCCTTGGCTGAAGTGTTCATAGGAAATGCCT
GATAGTATTGGAGGCTGGGAGCAGCAATTAGTGAGCAGGAGGAGGTCAGG
AGCGGGTGGTGAGTGGTTTCCTTAGGAGATGTGGGTAGGGGGAGGNNNNC
NNNNNNNNNNNNNNNNNNCNNNNNCNTTCTNTNTTTCTNTTTCTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTCTTTTTTTTTTTTTTTTT
TTTTTTNTTTTTCTTCTTTTTTTCCTCTTCTCTTTTTTTTTTCCCCCCTT
CTTTTTTTTTTCTTTTTTTTTTTTCTTTTTTTTTTTTTCTTTTTTTTCTT
TTTTCTTTTTTTTCCTTTTTTTCTTTTTTTTTTTTTTCTTTTTTTCTTTT
TTTTTTTCTTTTTTTTCTTTTTTTTTTTCTTTTTTTCCTTTTTTTCTTTT
TTTTTTTTTTTTTTTTCTTTCTTTTTTTTTTNTTTCTTTTTTCTTTCTTC
TTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTCTTTTCTTCTCTTTTTT
TTTTTTTTCTCCTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTCTTTTT
TTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTCTTCCTT
TTCTTTTCTTTTTTTTTTTTTCTTTTTTTTTCCTTTCTTTTCTTTTTTTT
TCTTTTCTTTTTTTCTTTTTTCTTTTTCTTTNTTTTTTTTTTTCTTTTTC
TTTCTCTTTCTTTTCTTTTTTTTTTTTCTTTCTTTTTCTTTTTCTTCTTC
TTTTCTTNCCTTTTTTTCTTTTTTTTTTTTCTTTTTTTTCTTTTTCTTCT
TTCTTTCTTTTCTTTTTTCTTTTTTTCTTTTTTTTCCTTTTTTTTCCTTT
TTTTTTTTTTCTCTTTTTTTTTTCTTTCTTTCTTCTTTTTTTTTTTTCTT
TTTTTTTTTTTCCCCTCTTNTTTTTTTTTTTTTTCTTTTTTTTCCTTTTT
CTTTTTTTCTTTCTTTTCTTTTTCTTTTTTTTCCTTTCTTTTCTTTTTTC
TTTTTTTCCTTTTTTTTCCTTTTTCCNCTCTCTTTCCCTTTTTCTTTTCT
TTCTCTCTTCTTCTNTCCTTTTTCTCTCCTTTTTTCTTCTTTTTTTTTTC
NTTCTTTCTTTTCTCCTTCTTTTTCC
|
quality values | Open.Hide. 0 0 0 3 6 7 9 8 7 7 12 10 9 14 14 13 10 8 10 8 8 8 12 15 8 8 8 10 14 12 24 22 35 30 24 28 28 28 33 33 33 33 33 37 37 37 32 28 28 29
37 30 30 33 33 50 50 33 26 13 13 10 22 26 30 27 16 15 14 12 13 13 10 10 10 10 12 25 28 47 46 41 41 36 36 38 38 42 42 42 43 43 43 47 47 47 47 47 53 53
59 59 68 68 68 68 57 35 29 14 14 14 24 27 43 46 48 48 50 50 51 51 51 48 41 26 26 15 15 15 29 29 41 41 48 50 50 51 51 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 51 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68
62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62
62 62 62 62 68 68 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57
57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 68 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57
52 52 52 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 59 59 59 68 68 68 59 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 68 59 57 57 57 57
57 57 54 57 57 43 38 37 37 30 44 39 48 48 57 54 54 54 54 54 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 57 57 57 57 57 57 59 59
59 59 59 59 59 59 59 59 59 59 59 59 59 44 41 41 44 59 41 37 37 37 39 41 59 50 50 50 50 47 41 39 39 39 39 39 44 44 44 47 41 41 41 48 50 48 48 59 57 57
57 57 57 57 59 59 59 48 48 48 48 39 43 43 43 42 41 41 41 39 27 27 3 0 3 13 21 29 30 37 41 39 37 37 22 22 24 27 30 30 41 41 39 36 36 43 43 48 48 48
48 40 40 40 37 37 37 32 29 30 41 41 41 39 37 44 39 37 37 37 31 31 32 37 37 30 30 30 33 27 31 33 34 32 30 30 37 23 23 23 19 15 15 32 34 34 28 24 21 25
15 22 28 34 29 32 32 37 37 37 28 29 18 12 11 17 12 15 23 28 28 28 34 36 37 41 40 39 37 39 30 30 25 24 22 25 30 37 34 34 25 23 21 15 8 10 10 10 8 9
20 20 28 28 15 9 8 8 8 8 10 12 18 21 20 9 13 8 8 8 17 13 13 15 13 13 11 22 17 16 18 24 20 13 8 8 8 12 8 8 15 10 11 11 14 13 13 10 9 9
8 8 9 9 9 9 11 18 11 10 10 10 15 15 10 10 9 9 13 17 19 22 25 22 23 26 23 23 8 8 7 9 8 7 6 8 8 10 22 19 24 24 17 23 10 8 7 8 8 10
10 10 9 9 9 9 10 11 14 10 10 11 11 11 10 14 18 10 10 8 9 9 9 9 9 11 13 14 25 24 15 14 8 9 8 8 8 8 8 8 8 8 8 6 6 6 8 8 10 8
8 8 8 8 8 8 10 8 10 12 8 8 8 8 10 6 8 8 6 8 8 10 15 19 10 10 8 9 15 10 10 10 9 9 9 10 12 10 8 8 8 8 8 8 11 10 6 6 6 6
6 10 11 8 10 9 9 11 12 22 18 19 9 9 9 10 10 12 24 19 16 10 9 9 9 13 21 8 8 8 8 8 8 8 8 12 12 11 11 12 12 11 8 8 8 8 6 10 8 8
8 8 13 15 17 17 13 16 14 14 12 13 14 16 14 13 13 9 7 10 8 9 9 9 10 10 9 9 10 7 6 6 6 6 8 10 11 11 10 8 8 8 8 8 8 8 6 8 8 17
8 6 6 6 8 13 7 7 7 11 10 7 7 8 6 8 8 8 10 12 12 11 11 8 8 6 6 8 8 8 8 6 6 8 6 6 8 6 6 8 8 8 8 8 6 6 8 7 7 10
6 6 8 8 8 8 8 8 12 12 13 6 6 6 6 8 8 10 9 9 6 6 8 8 12 12 10 9 9 6 8 6 6 6 8 8 8 6 6 6 8 8 8 8 8 8 8 8 8 8
| Open.Hide. 8 8 8 8 7 8 6 6 6 6 6 6 6 6 6 8 9 9 17 9 9 9 13 9 7 9 8 11 8 15 19 20 20 17 17 17 28 19 19 10 10 19 31 35 36 43 43 37 37 37
36 36 36 36 53 53 53 50 50 50 50 42 30 23 12 9 10 10 10 11 11 12 12 21 21 28 34 34 39 48 48 36 36 50 50 50 50 57 57 59 59 57 50 53 53 53 53 47 53 47
47 47 47 53 43 34 21 11 11 12 23 25 33 33 33 33 33 33 31 30 22 21 8 8 8 8 8 14 21 28 30 41 50 41 47 53 53 53 50 50 57 57 57 43 47 47 47 47 53 59
57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 68 68 68 68 68
68 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 57 57 57 57 68 59 59 57 57 57 57 48 48 48 59 59 59 59 59 59 59 57 57 57 59 57 57 57 57 54 68 57
57 57 57 54 54 54 54 54 68 68 68 68 54 57 54 54 48 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 50 50 50 50 50 41 59 41 39 23 23 3 0 0 0 0 3
0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 3 0 3 17 17 3 0 3 0 3 13 8 8 3 0 3 13 11 15 20 17 19 20 15 15 23
21 28 24 19 14 10 10 10 10 10 12 13 10 9 9 9 10 18 15 9 9 8 17 19 25 20 15 17 3 0 3 9 9 10 10 15 13 22 17 20 17 17 10 10 19 9 9 10 10 10
18 16 8 8 8 3 0 3 8 9 15 13 9 8 8 6 6 10 11 10 10 13 8 10 8 8 8 15 10 12 10 9 9 10 17 15 14 18 16 10 8 8 8 8 10 8 8 6 6 6
6 6 10 8 8 8 12 13 10 19 16 15 15 11 11 11 11 11 19 22 19 15 10 8 8 7 8 8 7 14 8 8 12 13 10 9 11 9 9 10 15 15 13 10 9 12 15 13 11 8
11 17 15 8 6 6 10 10 11 9 17 11 9 9 9 9 12 15 20 15 14 6 6 8 19 10 11 11 19 26 24 17 14 14 12 15 9 10 11 17 12 13 10 8 8 6 7 13 12 13
13 10 9 9 10 8 11 7 9 10 13 16 28 17 15 8 8 8 8 8 22 17 21 13 22 17 17 9 9 9 18 17 12 11 9 8 7 7 6 8 10 13 13 10 6 9 11 19 10 8
8 9 12 19 13 21 14 10 10 15 13 18 15 14 10 9 9 8 8 6 6 8 8 8 8 8 8 8 11 15 3 0 3 7 6 6 8 10 21 17 22 10 8 6 6 6 6 8 10 18
21 28 28 23 23 15 14 10 17 15 15 9 9 9 13 13 11 11 11 13 11 12 13 8 13 11 13 13 8 9 9 13 14 24 20 7 11 6 6 8 8 8 8 8 8 12 16 28 22 18
19 19 23 21 20 16 16 17 18 12 10 8 8 8 8 10 10 9 9 8 8 8 10 10 9 11 17 14 17 15 18 23 18 18 18 14 16 21 33 33 25 22 19 10 10 16 21 24 22 16
16 11 10 15 10 10 8 8 8 19 18 15 11 8 8 8 13 10 26 23 23 15 12 9 9 9 10 9 18 11 15 10 8 6 6 10 13 9 9 9 7 10 9 9 13 9 9 9 10 13
13 9 10 10 13 10 8 6 6 8 15 19 17 13 10 10 10 10 17 17 10 10 11 8 6 7 7 9 11 15 9 9 9 8 10 6 6 8 11 10 6 6 6 10 10 19 10 10 10 10
10 12 10 13 11 8 8 8 10 10 12 8 8 8 10 8 8 8 12 15 8 6 6 11 15 15 9 7 8 8 3 0 3 15 16 18 19 19 15 9 9 9 9 11 11 21 15 22 10 10
10 17 15 13 8 6 8 19 12 25 21 26 16 12 12 12 16 16 19 19 23 31 33 22 31 18 14 12 13 10 8 8 13 18 8 8 8 8 8 13 12 12 9 9 12 12 13 8 8 8
9 15 14 10 10 12 3 0 3 10 12 15 10 17 8 8 7 7 7 9 9 8 10 11 10 16 19 13 13 9 9 12 17 10 16 15 11 18 15 14 14 11 8 8 8 7 8 6 7 10
15 9 10 10 17 15 15 13 11 12 10 9 9 13 12 10 11 6 6 8 8 16 17 12 12 8 8 8 7 7 9 9 9 12 18 22 20 20 24 23 18 16 13 8 15 8 10 10 10 12
21 10 8 8 10 8 11 12 14 6 7 6 6 7 8 7 8 8 10 9 8 8 10 7 7 13 8 9 10 15 7 7 8 6 6 8 8 11 15 23 26 37 18 14 9 9 9 9 10 17
19 22 24 24 33 24 19 10 8 8 9 11 19 9 9 9 7 8 3 0 3 11 17 28 23 20 24 14 12 9 9 13 19 10 9 9 23 17 25 20 20 25 30 37 28 23 20 24 27 29
30 29 29 18 23 10 14 9 8 8 8 8 12 8 15 8 10 17 13 15 8 11 11 11 11 11 11 19 18 13 13 13 13 14 12 10 6 6 6 11 8 8 6 6 7 7 8 9 12 11
11 11 19 17 8 6 6 6 6 6 8 10 17 25 33 23 25 11 11 11 18 12 17 10 8 3 0 3 8 8 8 8 8 8 8 6 8 6 6 10 10 15 15 14 12 13 8 8 7 6
8 8 8 8 8 9 10 10 11 10 8 9 9 3 0 3 8 6 6 10 8 12 11 11 9 11 8 7 7 9 12 18 11 12 9 11 8 6 6 6 10 17 22 22 17 11 8 8 6 3
0 3 12 12 8 10 6 6 8 10 11 8 8 8 8 9 6 6 6 6 10 10 15 6 6 6 |