BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-048N20.T7 (MSMg01no048_n20.b1) | MSMg01-048N20.TJ (MSMg01no048_n20.g1) |
ACC | AG278517 | AG278518 |
length | 1,260 | 1,157 |
length of high quality (start - end) | --- | 263 (64 - 326) |
definition | CHROMAT_FILE: MSMg01no048_n20.b1 PHD_FILE: MSMg01no048_n20.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:10:16 2005 | CHROMAT_FILE: MSMg01no048_n20.g1 PHD_FILE: MSMg01no048_n20.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:10:16 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
---|
sequence | TATGGGCGCTATAGACTCCTATAGGGAGAGGATCCGCGGAATTTACTGAG
AGGNAACAGCCCCTTTAAAAACTCCTCGAAAAACGGCNAAAGTTGTTTAA
AATCCTTTCAGGACTACCACACCCCACTGXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTGTTCTCTTTGATTTTTCTGAT
TGATCTACTCCTGAGTCCTTCGGCTTTACTTTCTGTCTCTGCTTTTCTTT
TTTTTCTCTTGGTTTTATCTATTGTTCATTTCTTTTTGTTTTTTATTTCT
TTAATTGTTTTATTCTTTTTTTCTTTCCTTTATTTTTTATTTTTTTTCTA
TTTTTTTCTTTTTATCTTCTTTTTCTTTCTTTTTTATTTTTTTCTCTGTT
TTTTTTTTTCTTCTCTTCTTTTTTTTTTTTTTTCTTTTTTTTCTTATCTA
TTTTCTTTCTATAGTTTACTTTTTTTTTTTTATTTTTTTTTTTTATTTCT
TTTTTCTTTTTATCTTTTTTTTTTATTTTTCACTACTCTTTATGTCTTTT
TTTTTTTATGTCTTCTTTTTCTTTTCTTATCTTTTCTTATTTCTCTAGTT
TTCTTCTCTTTTCNCTTTTCATTTTCTTTCTTCTCTATCTCCTTCAATAT
TCTCTCTTTG
| GCCTCATAAAGTCCCCAGGGNNGTNGNGANGCTTACTGAAGTGCCTTGAA
AACTGCCCACCCCCCCCTGAAGTTTCCGGGTTTTGCTCAGGACGGTGCCC
GAAAGGACACAGGATGACAAATATTTTTGATAAAAAACAAATTAAAAAAA
AAGTTTCATGTGAATATAAATAAGTGAGGCACACTGAGACATAAGACATC
AGAGAAAGCATGATTCTTACTTTATCTACGGCTTAAATTCACTTCAGCTT
AGGGAATTTAAGCATAGCCCTAATTCCTGAGACACATATGCGGACTGTTA
GCAGGCAGTTTTCCAAAACACCAAACGATTACGTTCTTTCTCTCTTTTAA
GAACACTTTCTCTTTAAAAAAAAATCCTTTGCCCACTTTCTTGGAGTTCC
TATTACTGTGATAAGGCTTCTTGACTGAAAAGGAAAACAAAATTAAAAGA
TTTATTTTGCCTATCCTTCCACCATGTAAGGACGTGAATACAGGAACCTG
GAGCGCATGAGCTGGTATTAAACGCTCACTGGCTGCACTGCCTGTTTTGC
TCATACTACTTTCTTATACACTCTGGAACCACAGGCCTAGTGTAAACATC
CACAATGTTAGTTGGTTTCTCCTAATCATTCGAGAAAAAGCACCACTGTG
TTGCGTACACATCATTCTGGTGTTGACACTCTCCTTTTTGATGTTTACAT
ATGTCAAGTTTGTTTATAATTGTGTATCATATTTATTTATTTATTTATTC
ATCTTTTTATTTTTATATTACTCCTCTCTTTCAGCCTTTGATATTTTTCT
GTCTATATTCTTTCTTTTTTTCTTTTTTTATTTTTTTTTCTTTTTTTAAT
TATTTCTTTTCTTTTCTCTTTTTTATGTTTTATTTTTTATTTTTTACATT
CCTTTATTTTTTTCTTTTTTCACTTCTTTCTTTATTTGTCTTTTCTATTA
TACACTTTCTATTATATTTTGTTTCCTTTTTATTTTTTATATCTTTTATC
TTTCTACTCTTCTCTTATTACATTTATTATATCTATTTTTTTTTACTTTT
ATCTCTTTTTTTCAATACTCTTCCTCTTTNTCACTTAATCTTTCTTTATT
TGCTCCTTTCTACTTTCTTCGTCATTTCTTCATACTANCAATCTCACTAC
TCTTTTT
|
quality values | Open.Hide. 8 8 14 13 18 20 23 16 12 10 10 10 8 8 19 19 9 8 8 10 12 12 29 29 36 42 36 47 39 47 33 33 33 33 33 30 37 37 22 21 21 19 14 14 12 12 10 16 11 10
9 9 3 0 3 12 10 10 10 12 8 9 8 8 8 8 10 11 11 9 9 9 9 9 15 16 15 11 11 21 23 18 17 8 8 8 3 0 3 14 11 15 11 8 10 10 16 15 18 12
10 9 12 11 11 11 10 9 10 9 9 9 10 16 18 13 11 12 16 9 9 11 14 13 13 10 10 10 10 10 20 16 16 14 15 15 26 23 23 16 14 19 12 23 11 10 9 12 10 9
9 10 13 26 30 30 28 34 20 20 19 19 22 22 17 20 20 23 31 26 24 18 14 13 13 15 15 11 19 19 16 16 11 11 11 8 8 6 6 8 10 12 9 10 10 11 19 12 12 12
12 12 12 19 12 12 12 19 28 40 34 34 14 14 13 15 12 12 12 15 11 12 12 12 18 24 15 15 15 14 14 12 19 15 12 12 12 12 12 15 11 11 12 23 19 16 15 18 14 16
16 11 12 12 12 19 13 21 15 15 11 11 10 10 10 10 15 13 12 11 11 9 12 15 19 10 8 9 9 11 15 8 8 8 8 10 10 19 13 13 13 18 15 20 20 22 22 14 15 15
22 12 11 11 12 15 16 16 13 11 11 12 12 12 12 12 16 22 22 27 27 15 15 15 18 16 18 13 13 13 22 22 26 15 15 12 12 12 16 11 11 9 9 9 9 9 15 10 10 10
8 10 15 9 9 12 21 24 37 33 34 33 31 22 16 12 10 8 8 10 10 10 12 21 19 30 17 12 12 18 12 12 11 11 11 12 11 11 12 18 12 13 15 22 13 12 16 15 9 8
8 8 8 8 10 12 12 18 12 14 15 23 24 24 19 13 13 9 9 9 11 9 12 12 21 21 24 17 13 10 15 15 10 8 8 9 26 22 26 23 17 17 17 19 23 21 21 16 13 14
9 9 9 12 15 9 12 12 13 11 16 18 11 10 10 13 11 11 17 11 11 11 13 9 9 13 10 11 16 24 24 30 27 27 13 13 12 12 12 13 13 22 22 17 17 18 24 18 12 12
12 12 11 12 19 17 18 16 12 11 11 20 23 33 23 21 11 11 11 17 19 22 15 15 11 11 11 12 19 13 13 13 21 19 12 10 10 10 10 10 10 21 26 24 11 10 8 8 10 8
8 8 10 10 23 21 10 10 6 6 8 8 10 11 18 13 13 10 12 12 10 9 11 11 16 12 18 24 19 15 11 15 15 25 21 28 23 32 22 28 10 10 8 8 8 8 15 10 11 10
8 8 11 15 12 12 14 14 12 12 13 15 15 8 8 8 8 8 8 8 8 8 10 10 15 11 10 11 11 20 18 19 12 12 15 16 13 13 11 11 8 8 8 8 8 8 8 14 15 15
14 12 12 12 9 10 12 10 16 12 11 11 11 11 22 23 18 18 11 11 11 15 12 13 11 10 10 11 10 10 10 10 10 10 8 8 10 9 8 8 8 8 8 8 9 9 10 17 13 17
16 24 19 15 10 9 9 9 9 9 9 10 10 9 9 9 9 11 10 10 10 10 8 8 6 7 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 11 13 11 11 11 14 13 13 16
10 12 8 8 8 8 8 11 8 8 7 7 7 7 9 13 9 8 10 8 8 8 8 9 11 10 10 8 8 6 6 8 8 6 6 10 8 9 10 10 16 16 24 16 11 10 8 8 10 10
8 6 6 6 6 10 8 8 8 8 8 6 8 8 8 8 8 8 8 10 10 8 8 8 10 15 10 8 8 8 8 8 8 8 8 8 8 8 6 6 8 6 9 10 10 15 11 10 8 8
8 11 12 15 16 12 11 11 11 12 12 8 13 15 10 8 8 8 8 8 10 13 11 9 8 8 8 8 8 8 10 12 10 8 8 8 10 7 7 8 8 10 10 9 9 9 10 10 10 9
8 8 10 9 9 9 10 10 13 12 8 8 10 11 11 18 21 14 18 18 28 19 19 10 13 10 10 10 8 8 8 8 8 8 9 10 13 8 8 10 13 14 17 14 13 15 8 8 8 8
8 10 15 12 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 6 8 8 8 10 10 10 12 18 21 15 15 15 21 21 14 12 12 6 6 8 8 8 6 6 10
10 11 14 10 9 9 9 16 15 9 8 10 7 7 8 12 7 9 10 15 16 15 19 16 14 13 13 8 12 7 8 10 8 9 15 19 16 10 9 10 10 8 8 8 8 8 8 8 8 8
8 12 14 8 8 8 8 8 8 8 10 9 9 9 8 8 8 8 8 8 13 10 10 18 24 28 20 22 18 18 10 10 8 9 9 14 16 28 26 26 15 8 8 6 7 8 12 10 9 9
9 9 8 8 8 8 10 13 13 12 6 6 8 6 8 8 10 13 9 9 8 11 8 8 8 8 8 8 14 10 10 8 8 6 6 8 10 13 8 12 6 6 6 6 10 10 10 10 19 28
28 32 28 20 10 8 6 6 6 8 10 10 10 10 12 10 13 11 9 12 10 10 13 15 8 7 6 6 6 8 8 10 9 13 13 8 8 6 6 8 8 6 6 8 8 8 6 6 6 8
8 10 7 6 8 8 12 9 9 7 7 6 3 0 3 7 9 12 8 6 7 8 7 12 9 9 8 10 7 7 10 8 11 11 13 11 13 11 9 9 9 6 6 8 6 6 6 6 6 6
7 6 6 6 7 10 10 8 8 8 | Open.Hide. 7 7 8 8 8 8 10 8 9 9 10 10 10 10 9 14 15 14 17 3 0 0 3 3 0 3 0 3 3 0 3 25 25 39 41 46 46 46 37 23 19 9 9 9 10 11 10 10 10 15
13 18 12 12 8 8 8 8 8 8 11 11 11 11 18 23 37 47 47 43 40 40 40 43 43 57 43 39 35 35 47 47 47 48 47 48 37 42 30 30 30 28 27 15 12 12 15 24 31 32
34 20 20 20 28 19 11 11 11 23 30 32 32 28 23 13 10 10 10 18 21 47 47 57 57 57 57 44 44 37 42 42 35 35 35 41 42 43 44 43 41 37 42 37 39 43 44 44 47 47
47 47 57 50 50 43 37 37 43 43 44 44 36 24 32 36 28 20 26 11 11 11 24 24 33 24 27 12 12 12 24 24 35 43 38 59 35 35 24 38 19 19 18 12 12 13 24 38 38 34
20 20 27 24 24 15 15 18 32 32 37 43 38 43 24 19 13 13 13 38 38 57 57 57 52 24 17 10 10 10 10 10 12 15 24 32 43 47 52 57 43 43 42 44 44 32 32 32 36 38
30 32 20 32 32 47 42 57 42 32 24 12 13 15 15 14 14 26 24 42 42 44 42 47 41 42 35 36 23 21 11 11 11 21 21 37 28 28 13 12 12 11 19 19 36 36 35 31 37 31
23 23 15 15 17 17 18 19 19 32 34 37 37 28 29 25 28 30 35 32 39 32 25 25 11 12 12 23 22 23 19 17 16 16 10 9 9 9 9 9 11 23 22 33 33 35 35 26 31 19
29 15 21 21 37 43 39 43 43 39 39 36 43 43 37 28 24 24 20 24 20 32 32 22 15 8 8 8 8 19 11 9 8 8 8 8 8 17 19 39 37 37 28 28 28 33 33 30 33 35
34 34 35 37 35 37 37 26 30 14 16 14 24 24 21 15 14 12 19 13 14 14 22 19 28 21 21 15 17 17 20 18 21 12 11 11 12 12 14 15 15 20 23 23 11 9 9 11 9 10
10 21 17 30 37 37 26 23 13 15 10 10 23 27 23 28 28 31 31 30 28 28 23 16 16 16 19 19 15 8 8 6 6 8 10 13 22 8 8 8 8 8 8 13 13 14 13 17 13 11
9 9 9 9 13 13 10 12 12 12 12 12 19 10 10 13 10 10 10 11 12 11 11 11 20 12 21 17 16 16 12 12 13 15 15 12 8 8 10 10 10 10 14 26 26 28 23 12 12 15
15 11 8 6 6 6 8 8 10 12 30 30 39 27 17 9 9 9 9 10 24 29 28 21 19 12 12 11 13 10 8 8 8 8 8 10 13 13 15 13 10 10 10 8 8 8 8 9 17 17
16 17 13 9 9 9 9 9 9 11 14 16 16 11 14 15 15 19 10 12 8 10 6 6 8 8 8 8 8 10 9 9 9 9 9 11 8 8 9 9 9 10 12 8 8 6 6 7 6 8
8 9 8 10 8 8 8 8 11 11 11 11 12 12 12 19 19 15 12 11 9 9 9 8 8 7 6 8 6 7 10 10 24 20 23 19 24 13 13 10 10 8 8 8 8 11 8 8 10 13
17 10 13 13 11 11 11 11 6 10 6 6 8 8 8 8 8 8 8 8 8 10 8 6 8 8 6 6 8 8 8 10 10 8 8 9 8 10 6 6 8 8 11 15 18 19 16 15 10 10
8 8 7 6 8 8 8 8 8 8 13 10 10 8 6 6 8 8 8 8 8 9 9 9 9 9 11 11 8 13 8 8 8 8 10 10 10 13 10 6 8 7 7 8 8 8 8 9 8 8
8 8 8 8 9 8 8 8 8 8 10 15 24 23 19 15 12 12 10 8 8 8 8 8 8 8 10 15 10 10 8 10 8 9 9 10 8 8 8 8 8 10 15 12 12 10 11 11 13 13
11 13 10 10 8 8 8 8 6 7 7 7 8 8 12 14 10 10 9 12 12 12 8 8 8 8 10 8 8 8 8 6 8 8 8 8 8 8 8 8 8 8 8 7 8 8 6 6 8 8
10 12 12 12 12 11 11 10 13 10 12 11 7 7 8 8 10 10 10 8 8 8 11 9 9 9 11 12 9 9 8 8 6 6 6 7 8 8 8 6 6 10 13 9 9 12 10 10 8 8
8 8 8 8 9 10 10 10 9 9 9 9 8 8 8 8 8 8 11 9 9 9 11 10 9 9 9 10 8 10 8 8 8 8 10 9 9 9 9 8 8 6 6 8 8 10 8 8 8 8
6 6 6 6 6 8 8 10 6 6 8 8 8 11 11 8 8 8 8 8 8 8 8 6 8 6 6 8 8 8 8 8 8 8 8 11 11 14 17 18 10 8 8 8 7 6 8 8 10 8
8 6 6 8 12 8 12 18 12 11 8 8 6 6 8 8 8 8 8 10 10 8 8 8 8 8 8 11 3 0 3 9 9 9 9 9 8 8 6 7 10 13 6 9 8 10 6 6 8 8
9 8 8 8 8 8 8 9 9 9 9 10 9 9 10 10 10 12 15 9 7 6 8 8 8 10 8 8 8 8 7 6 8 8 8 6 3 0 3 9 8 8 8 8 8 8 8 13 6 7
8 8 19 18 11 11 11 |