Query= MSMg01no050_m09.b1 MSMg01no050_m09.b1 CHROMAT_FILE:
MSMg01no050_m09.b1 PHD_FILE: MSMg01no050_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:49:32 2005
(433 letters)
>mm_chr4_65673017_65673848
Length = 832
Score = 704 bits (364), Expect = 0.0
Identities = 415/432 (96%), Gaps = 1/432 (0%)
Strand = Plus / Plus
Query: 2 taacttactatgctacaagtttggaggatagagaacatcccagagccaccgttagatcct 61
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 202 taacttactatgctacaagtttggaggatagagaacatcccagagccacagttagatcct 261
Query: 62 atcagttccattttaatcacaatgttatctaattcctcatcactagagttagctaacatc 121
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atcagttccattttaattacaatgttatctaattcctcatcactagagttagctaacatc 321
Query: 122 ttttcctacctctgccaatagtggcaggaatgaaaagaagccataaatcccctttccatt 181
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 322 ttttcctacctctgccaatagtggcaggaatgaaaagaagccatcaatcccctttccatt 381
Query: 182 ttcctttggctccgagtcactaagctgtccttcaacagatcactgtgttaggtggaaaaa 241
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 382 ttcctttggctctgagtcactaagctgtccttcaacagataactgtgttaggtggaaaaa 441
Query: 242 aacccacgaagttttgatcaatgttaatcctttatcaaaacgagccacatctaaatattc 301
|| ||| |||||||||||||||||||| || |||||||| |||||||||||||||||||
Sbjct: 442 aaaccaggaagttttgatcaatgttaacccaatatcaaaaagagccacatctaaatattc 501
Query: 302 ctagaacctaacctgaagaagttggtacacagattatagtgttagaaaaaaaacttacat 361
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctagaacataacctgaagaagttggtacacagattatagtgttagaaaaaaaacttacat 561
Query: 362 cgctaatatctattctccaattttccgctttgttctattcaagcctcactttatcctcat 421
|||||||||||||||| ||||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 562 -gctaatatctattctctaattttctgctttgttttattcaagcctcattttatcctcat 620
Query: 422 tttatatagaat 433
||||||||||||
Sbjct: 621 tttatatagaat 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 832
Length adjustment: 9
Effective length of query: 424
Effective length of database: 823
Effective search space: 348952
Effective search space used: 348952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no050_m09.g1 MSMg01no050_m09.g1 CHROMAT_FILE:
MSMg01no050_m09.g1 PHD_FILE: MSMg01no050_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:49:32 2005
(318 letters)
>mm_chr4_65846182_65846900
Length = 719
Score = 551 bits (285), Expect = e-161
Identities = 311/323 (96%), Gaps = 9/323 (2%)
Strand = Plus / Minus
Query: 1 caggctggccttgaactcagaaatcctcccgcctctgcctcccgagtgccggctttaaag 60
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 616 caggctggccttgaactcagaaatcctcctgcctctgcctcccgagtgctggctttaaag 557
Query: 61 g-cggtcaccactactgcccggccacaagttgttaatgaaattatctggact----tcca 115
| ||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 556 gccgg-caccactactgcccggccacaagttgttaatgaaattatctggactggaa---a 501
Query: 116 gtagtgtctctctacttataaatccatcaatgttggaacctttggacccaagctaattgg 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtagtgtctctctacttataaatccatcaatgttggaacctttggacccaagctaattgg 441
Query: 176 ggcagataggaaagcaatctggatctactattgacaaaccagtggcccatttctttgccc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 440 ggcagataggaaagcaatctggatctactattgacaaaccagtggcccatttctttgtcc 381
Query: 236 ttctttattcctcctccagggtggactcattgcacttctcctcctgctgttggtgttcac 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttctttattcctcctccagggtggactcattgcacttctcctcctgctgttggtgttcac 321
Query: 296 agtggcactgtatgcccagcgac 318
|||||||||||||||||||||||
Sbjct: 320 agtggcactgtatgcccagcgac 298
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 719
Length adjustment: 9
Effective length of query: 309
Effective length of database: 710
Effective search space: 219390
Effective search space used: 219390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
