XXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAACCCGGCGGAATTCACAA
GTCTCTTCCCTAAATACTGGCTTCACATTAGTCATTGTTTATTAGGGCAC
CTTGGTATTAGCAAACGAGTCTTCTAGCTTATTCCCGCCTAAGCAATTCA
TATTAAGAATACTGCTAAAGAAACTAGCTAATAAATTACCTATCAGGCGT
GTAGTGTTCACAATTAAAATTTGTAAATGAAGGTTAAAGTTAGGAGTTAG
AAGGCTAGGAGCATAAGAGAAAAATGTTGAAATACTGTGATTGACAGTAA
TAAATTACTGCAATGATGATTTTTTCACATAAACTGAATTTATCAGAAAA
AGCCAAGCCTATTTTGAAATAGACATTTTTACTCATCTATTCAATTATGC
TTTCAAGAATCATTTATCACTTGATGTATATAGTGCAACTTGAGGAAAAG
GCACAGTAAACAGACATTGTATTCTTACCTTCAGCTATTATTTAGACCCT
GAAAGCCATGGGTATATAAACTCTGAATCTGTGTGTCTGTGTTCTAGCTA
TCCATCAATTATTTATGCTTTATCATCTTTAATCAGTCTTCTGTTTTTAA
TTATCTAGCCATATGTATATGTACAAATACAAACATAACACACACACAGA
TTCTGTATCATTTATCAATCTTTGTAATCTAGTGTAGTCATATAAGCAGA
TGATGCCAATGATATAATATT

AATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTTGTTTAGCTTTGTACCCCATTTTTAAATAG
GGTTATTTGGTTTTCTGGAGTCCAACTTTGTAAGTTCATTATATATATTG
GATATTAGCCCCCTATCAGATTTAGAATTGGTAAAGATCTTTCCCCAATC
TGTTGGTTGTATTATGTCTTATTGACAGTGTCCTTTGCCTTACAAAGGCT
TTGCAATTTTATGAGGTCCCATTTGTTGATTCTTGATCTTACATCACAAG
CCTTCGCTATTCTGTTCATGAATTTTTCCCCCTGTGCCCATATCTTTGAG
GCTTTCCTCCACTTTCTCCTCTATAAATTTCAGTGTCTCTGATTTTATGT
GGGGTTTCTTGATCCATTTAGACTTGAGCTTTGTACAGGAGATAAGAATG
GATCAATTCCCATTCTTCTACATATTAACAGCCAGTTGAGTCAGCACCAT
TTGTTGAAAATGCTGTCTTCTTTCCACTGGATGGTTTTAGCTCAAGTGAC
CATAGGTGTGTGGGTTCATTTCTGTGTCTTCAATTCTATTTCATTGATCT
ACCTGTCTGTCACTGTACATGTCCCACACAGTTTTTATTATTATTGCTCT
GTATTACAACTTGAGGGCAGGGTTTGTGATTTCACCACAGGTTCCTTTAT
TGCTGAGAAGATTTT

Query= MSMg01no052_k23.b1 MSMg01no052_k23.b1 CHROMAT_FILE:
MSMg01no052_k23.b1 PHD_FILE: MSMg01no052_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:22 2005
         (655 letters)



>mm_chr4_92391082_92392138
          Length = 1057

 Score = 1176 bits (608), Expect = 0.0
 Identities = 644/660 (97%), Gaps = 10/660 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctggcttcacattagtcattgtttattagggcaccttggtattagcaaacgagtcttcta 60
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 856 ctggcttcacattagtcattatttattagggcaccttggtattagcaaacgagtcttcta 797

                                                                       
Query: 61  gcttattcccgcctaagcaattcatattaagaatactgctaaagaaactagctaataaat 120
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gcttgttcccgcctaagcaattcatattaagaatactgctaaagaaactagctaataaat 737

                                                                       
Query: 121 tacctatcaggcgtgtagtgttcacaattaaaatttgtaaatgaaggttaaagttaggag 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tacctatcaggcatgtagtgttcacaattaaaatttgtaaatgaaggttaaagttaggag 677

                                                                       
Query: 181 ttagaaggctaggagcataagagaaaaatgttgaaatactgtgattgacagtaataaatt 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 676 ttagaaggctaggagcataagagaaaaatgtttaaatactgtgattgacagtaataaatt 617

                                                                       
Query: 241 actgcaatgatgattttt----tcacataaactgaatttatcagaaaaagccaagcctat 296
           |||||||||||||    |    ||||||||||||||||||||||||||||||||||||||
Sbjct: 616 actgcaatgatga----tacaatcacataaactgaatttatcagaaaaagccaagcctat 561

                                                                       
Query: 297 tttgaaatagacatttttactcatctattcaattatgctttcaagaatcatttatcactt 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttgaaatagacatttttactcatctattcaattatgctttcaagaatcatttatcactt 501

                                                                       
Query: 357 gatgtatatagtgcaacttgaggaaaaggcacagtaaacagacattgtattcttaccttc 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gatgtatatagtgcaacttgaggaaaaggcacagtaaacagacattgtattcttaccttc 441

                                                                       
Query: 417 agctattatttagaccctgaaagccatgggtatataaactctgaatctgtgtgtctgtgt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agctattatttagaccctgaaagccatgggtatataaactctgaatctgtgtgtctgtgt 381

                                                                       
Query: 477 tctagctatccatcaattatttatgctttatcatctttaatcagtcttctgtttttaatt 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctagctatccatcaattatttatgctttatcatctttaatcagtcttctgtttttaatt 321

                                                                       
Query: 537 atctagccatatgtatatgtaca-a-atacaaacataacacacacacagattctgtatca 594
           ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 320 atctagccatatgtatatgtacacatatacaaacataacacacacacagattctgtatca 261

                                                                       
Query: 595 tttatcaatctttgtaatctagtgtagtcatataagcagatgatgccaatgatataatat 654
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 260 tttatcaatctttgtaacctagtgtagtcatataagcagatgatgccaatgatacaatat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1057
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1047
Effective search space:   675315
Effective search space used:   675315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)