Query= MSMg01no056_g02.b1 MSMg01no056_g02.b1 CHROMAT_FILE:
MSMg01no056_g02.b1 PHD_FILE: MSMg01no056_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:01 2005
(189 letters)
>mm_chr4_40258072_40258660
Length = 589
Score = 342 bits (177), Expect = 6e-99
Identities = 186/189 (98%)
Strand = Plus / Minus
Query: 1 gacttaatgaggctgttccttgccccactcaggtaatatgcaggtaataacagaacccgt 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 389 gacttaatgaggctgttccttgccccactcaggtaatgtgcaggtaataacagaacccgt 330
Query: 61 gtttcagttcctaagcccagagtccaggtgcgtcgctactgttagcctacccctataatt 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gtttcagttcctgagcccagagtccaggtgcgtcgctactgttagcctacccctataatt 270
Query: 121 agacgtagctattccttacaatacatataagaatgtcttgtaatggctgattaccataag 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agacgtagctattccttacactacatataagaatgtcttgtaatggctgattaccataag 210
Query: 181 cctctgcaa 189
|||||||||
Sbjct: 209 cctctgcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no056_g02.g1 MSMg01no056_g02.g1 CHROMAT_FILE:
MSMg01no056_g02.g1 PHD_FILE: MSMg01no056_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:01 2005
(253 letters)
>mm_chr4_40136588_40137242
Length = 655
Score = 453 bits (234), Expect = e-132
Identities = 244/248 (98%), Gaps = 2/248 (0%)
Strand = Plus / Plus
Query: 8 tgttgacagtgtgccaggactgcctccagtgtgcagctcactcaccccttcctcccctca 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tgttgacagtgtgccaggactgcctccagtgtgcagctcactcaccccttcctcccctca 267
Query: 68 gacaggcgtacagtcgtccccacaccattctctctctgctcagtacagataatgaatttg 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gacaggcgtacagtcgtccccacaccattctctctctgctcagtacagataatgaatttg 327
Query: 128 ggggttcccgagtctaattgccatgtgggacgcaaacaatttcctgatttctgtccctct 187
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 328 ggggttcccgagtctaattgccatgtgggaagcaaacaatttcctgatttctgtccctct 387
Query: 188 cttctgaatcagttcccttggagagggggctcag--caaatctgaggagtaaggcgcttt 245
|||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 388 cttctgaatcagttcccttggagagggggctcagagcaaatttgaggagtaaggcgcttt 447
Query: 246 tttctctg 253
||||||||
Sbjct: 448 tttctctg 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 655
Length adjustment: 9
Effective length of query: 244
Effective length of database: 646
Effective search space: 157624
Effective search space used: 157624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
