Query= MSMg01no057_h02.b1 MSMg01no057_h02.b1 CHROMAT_FILE:
MSMg01no057_h02.b1 PHD_FILE: MSMg01no057_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:23 2005
(566 letters)
>mm_chr4_76183967_76184932
Length = 966
Score = 1042 bits (539), Expect = 0.0
Identities = 557/565 (98%), Gaps = 4/565 (0%)
Strand = Plus / Plus
Query: 6 gaattctcttcgtgttatcataacctttctgttgtatccaccactgtatttgaaaagggc 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattctcttcgtgttattataacctttctgttgtatccaccactgtatttgaaaagggc 261
Query: 66 cttcgtgtttctaaccctctttgttctgttagtataaaaacttcacgaaactgcttctgg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cttcgtgtttctaaccctctttgttctgttagtataaaaacttcacgaaactgcttctgg 321
Query: 126 gtaggaacatagaatttgaggaaacctaaatttctgttcttgagccatggtccctcttac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtaggaacatagaatttgaggaaacctaaatttctgttcttgagccatggtccctcttac 381
Query: 186 ----ctccagaataaactatctcttatcacttttgaagtgagaattgtgtttttatatca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttacctccagaataaactatctcttatcacttttgaagtgagaattgtgtttttatatca 441
Query: 242 ataagataaatgcacaaactctatgaaacagaacagaaataaacaagaagcaacaggcta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ataagataaatgcacaaactctatgaaacagaacagaaataaacaagaagcaacaggcta 501
Query: 302 gcctaaacaatcaaccaacaaacaaaactaacagaagagctgtctttttaaaaaatccct 361
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 502 gcctaaacaatcaaccaacaaacaaaacaaacagaagagctgtctttttaaaaaatccct 561
Query: 362 gctaaaagaaactaaagttatagtaacaaaataataaagctggcatcatagaaatttaaa 421
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 562 gctaaaagaaactaaagttatagtaacaaaataataaagttggcatcatagaaatttaaa 621
Query: 422 taagttaaagaaaaaaagtcaaacactgcagaatctttcatagtgaactttaaaatcaaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 taagttaaagaaaaaaagtcaaacactgcagaatctttcatagtgaactttaaaatcaaa 681
Query: 482 aagtgcaggttcagtctaaaatttcctattgtttttgattagatggaacaaaagacaact 541
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 682 aagtgcaggttcagtctaaaatttcctattgttttttattagatggaacaaaagacaact 741
Query: 542 aagacaaatggagaggaattgtcag 566
|||||||||||||||||||||||||
Sbjct: 742 aagacaaatggagaggaattgtcag 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_h02.g1 MSMg01no057_h02.g1 CHROMAT_FILE:
MSMg01no057_h02.g1 PHD_FILE: MSMg01no057_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:23 2005
(332 letters)
>mm_chr4_76298795_76299527
Length = 733
Score = 613 bits (317), Expect = e-180
Identities = 329/333 (98%), Gaps = 1/333 (0%)
Strand = Plus / Minus
Query: 1 ctcatgaaaaa-taaaatgctgaaaattatgatgcacagctggtcccctaagctctgctg 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ctcatgaaaaagtaaaatgctgaaaattatgatgcacagctggtcccctaagctctgctg 474
Query: 60 atcctgaaatacctggctgatccctcaaggacttcatcctccaaagaagccttgagggaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 atcctgaaatacctggctgatccctcaaggacttcatcctccaaagaagccttgagggaa 414
Query: 120 atgttctacaataaagtgttgacttattttatgctgcattccatggcagacaacagggag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atgttctacaataaagtgttgacttattttatgctgcattccatggcagacaacagggag 354
Query: 180 aaaagctttcctttccttttaattttatgggctcttttactgctgtagtaaaattataag 239
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 353 aaaagctttcctttccttttaattttatgggttcttttactgctgtagtaaaattataag 294
Query: 240 cacggggtgaccctctacctgccagcacacaatagctagatgattgaatctggccctgct 299
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cacggggtgaccctccacctgccagcacacaatagctagatgattgaatctggccctgct 234
Query: 300 ggaacaaactcatttctgcattcccttttcaat 332
|||||||||||||||||| ||||||||||||||
Sbjct: 233 ggaacaaactcatttctgtattcccttttcaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 733
Length adjustment: 9
Effective length of query: 323
Effective length of database: 724
Effective search space: 233852
Effective search space used: 233852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
