TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGA
ATTCACTTCCACTTTCCCATTCTACCAAGACTTGAACCATGTATGAAAGA
ATCTCACCATGCATGACCCCTCAAACTGTTGGATGGCTAAGCCTCTAAAA
ACAACAAACCAAGGAATTTCTGTTCTTTACAAGTTTCCAAGTCCAAGGTA
TTCTGTTAAAGCAGCATAAATTGAGCTCAGTCAGAGTAGTAATATCATGA
TGCTAATGTATTCACTTGAAGGAAAATTCGGATGCAATAAGAAACTAGAA
TAGTTATTAATTGGAAATTTTTACAGCTAAAATCTATCAGCTGTAAAAAT
GAGCATCACTGTTACTTCTAAAATTAAATTTTAAATCCACTTAAAATTTA
GAAATCAATAAATAGGACTTTACTTAATGTTACAAAGTAACTACCAGGAA
GAATTAAGTATAGCATAAACACGTTCTTTCCTAAGTAAGGCTAGAAGTGT
AAGACCCCAACTCAATGTGTTTATTAGACCCCTAGAAATGAAGCCCAGCA
TGGAGTTCTTTGTTCTTTCGCCTTCAGCCTGAGAGACAGATGAGCTGTAA
TTCACCATCCCCATTTTTACGATGTTTACTCAGCATCCCCATTCTTTCTG
GTCTTATCCTCACTTTGCAGTTTATTCTTTAAAAACCCTCAACTGCAACT
GCTGGGGGTCGATCTCCTCTGCCCCTGTGTGC

TCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGTGCTTTAATAGGAGTTCTAAAGGAT
TAACATGAGAACTCTTCCCTGGTATTATCTTGTAATTGGCATTGGTTATT
ATAAAGAGTCAAGAGTAGTCATAGTTCTGCAAAAAAGAGCTAAATACTTC
TGACACTTGGAATTAGATCAGAGACTTAGAGCAGGGGCTTCCTCTCTGCC
TTGTGACTGGGGATGGTGGAAAGCCAGGCAACAGTTTATGGCAAAGGATG
CAGTAATTTATAGGATGCAGTACAGGCTGCTTAGGGTGGTTTTATAATTG
ATTGCTCTGGAAATAGCAACTAAATGACCCACTTCAACTTGAAAAGGACC
TGTTTGTTTTTCCAGCCCCCGTATGAAAGATAAAAAACGCCTCTGGTTTC
ATCCCCTGTAATGACTGAGCTTGTGTGATTTTGTTGGCGTTTTGGAGCAC
TATTTCTTATGCAAAAGTTACAAACTGGAGGGTGCAGAGAGGCTGGAGCG
AGTCTTGATCATTGCAAAGGGAGGTCATTGAAGGCCCAGTTCTCTCTAGG
AGCCCCCTGCTTTGTGCCACTCCTGTTCTTGTCTGCTGTGCTTTGCATTT
TTTGTCCTTCTTTTCTATCTCTTCCTTCCTTCTTTCATTCTCTCTCCTTC
CTTTCATACCTCTAC

Query= MSMg01no059_c18.g1 MSMg01no059_c18.g1 CHROMAT_FILE:
MSMg01no059_c18.g1 PHD_FILE: MSMg01no059_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:37 2005
         (442 letters)



>mm_chr4_6296784_6297631
          Length = 848

 Score =  808 bits (418), Expect = 0.0
 Identities = 438/448 (97%), Gaps = 6/448 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgctttaataggagttctaaaggattaacatgagaactcttccctggtattatcttgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgctttaataggagttctaaaggattaacatgagaactcttccctggtattatcttgt 260

                                                                       
Query: 61  aattggcattggttattataaagagtcaagagtagtcatagttctgcaaaaaagagctaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattggcattggttattataaagagtcaagagtagtcatagttctgcaaaaaagagctaa 320

                                                                       
Query: 121 atacttctgacacttggaattagatcagagacttagagcaggggcttcctctctgccttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atacttctgacacttggaattagatcagagacttagagcaggggcttcctctctgccttg 380

                                                                       
Query: 181 tgactggggatggtggaaagccaggcaacagtttatggcaaaggatgcagtaatttatag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgactggggatggtggaaagccaggcaacagtttatggcaaaggatgcagtaatttatag 440

                                                                       
Query: 241 gatgcagtacaggctgcttagggtggttttataattgattgctctggaaatagcaactaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgcagtacaggctgcttagggtggttttataattgattgctctggaaatagcaactaa 500

                                                                       
Query: 301 atgacccacttcaacttgaaaaggacctgtttgtttttccagcccccgtatgaaagataa 360
           ||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||
Sbjct: 501 atgacccacttcaacttgaaaaggacctgtttgtttttccagttactgtatgaaagataa 560

                                                                       
Query: 361 aaaacgcctctggtttcatcccctgtaatga------ctgagcttgtgtgattttgttgg 414
           |||||||||||||||||||||||||||||||      |||||||||||||||||||||||
Sbjct: 561 aaaacgcctctggtttcatcccctgtaatgataaacactgagcttgtgtgattttgttgg 620

                                       
Query: 415 cgttttggagcactatttcttatgcaaa 442
           ||||||||||||||||||||||||||||
Sbjct: 621 cgttttggagcactatttcttatgcaaa 648


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 848
Length adjustment: 10
Effective length of query: 432
Effective length of database: 838
Effective search space:   362016
Effective search space used:   362016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)