Query= MSMg01no059_f14.b1 MSMg01no059_f14.b1 CHROMAT_FILE:
MSMg01no059_f14.b1 PHD_FILE: MSMg01no059_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:50 2005
(345 letters)
>mm_chr4_89069972_89070716
Length = 745
Score = 644 bits (333), Expect = 0.0
Identities = 336/337 (99%)
Strand = Plus / Plus
Query: 1 aatatagaaaattcattttgaaaatgaactcagggttcttttgagaatcagggcacttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatatagaaaattcattttgaaaatgaactcagggttcttttgagaatcagggcacttcc 260
Query: 61 ttaatcatatagtaagtgggtttgtgtggctttccagtgatcagtatgattgggttgatc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatcatatagtaagtgggttcgtgtggctttccagtgatcagtatgattgggttgatc 320
Query: 121 taagtgccttcccacctttgtccagccccatatgggtcatctacatttttttgtactctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagtgccttcccacctttgtccagccccatatgggtcatctacatttttttgtactctc 380
Query: 181 aaaacagggactggagaggatgtgacactattttgtctctgtatgctttgcctatagtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaacagggactggagaggatgtgacactattttgtctctgtatgctttgcctatagtct 440
Query: 241 cccagtctatggtatgcatgtgtatgcacacatttgtatgtgtgcacataggtgtgtaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccagtctatggtatgcatgtgtatgcacacatttgtatgtgtgcacataggtgtgtaca 500
Query: 301 ggtgtgcatacactttgtgtgtgtgtgtgtgtgtgtg 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtgtgcatacactttgtgtgtgtgtgtgtgtgtgtg 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_f14.g1 MSMg01no059_f14.g1 CHROMAT_FILE:
MSMg01no059_f14.g1 PHD_FILE: MSMg01no059_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:50 2005
(425 letters)
>mm_chr4_89241865_89242689
Length = 825
Score = 569 bits (294), Expect = e-166
Identities = 307/312 (98%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 116 ctccacatcctcaccaacatctgctgtcacctgagattttgatcttagccattctgact- 174
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ctccacatcctcaccaacatctgctgtcacctgagattttgatcttagccattctgactg 766
Query: 175 -gtgtaaggtggaatctcagggtcgttttgatttgcatttctctgatcactaaggactct 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ggtgtaaggtggaatctcagggtcgttttgatttgcatttctctgatcactaaggactct 706
Query: 234 gaacatgactttaggtgcttctcagccatttgagattcctcagttgtgaattctccgttt 293
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 705 gaacatgtctttaggtgcttctcggccatttgagattcctcagttgtgaattctccgttt 646
Query: 294 agttttatgccccagtttctccatcgcacctccccaatcactgcctgctctgactgaggc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 645 agttttatgccccagtttctccatcgcacctccccaatcactgcctgctctgaatgaggc 586
Query: 354 cttggaacgagctctggccctacctaagaagtgcgggagtgccctctcgtgggtctaggt 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 cttggaacgagctctggccctacctaagaagtgcgggagtgccctctcgtgggtctaggt 526
Query: 414 agtcatttcaga 425
||||||||||||
Sbjct: 525 agtcatttcaga 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
