XXXXXXXXXXXXXXXXXXXXXXXXXXCTACTGCAAGAGGAGGCGCGGAAT
TCCACATATATCCAAAATTTCAGAGCTTGTGGATATTAGGCAAAAAGCTC
AGAATACCCACAATAAAACTCACAGGCTATATGAAGCCTAAGAAGCAGAA
AGACCAATGTGCAGATGCTTCAATACTACTTAGAAGGGGTATCAAAATAA
TTATGGGAGGTAGATGGTGGGAGGGACTTGGGAGGAAGAGAGGAGGTTAT
TTCTTTATTTACATATTTTTTTTTCTTTACTTCGTGCTTTTTTCTTTGTA
TCTACAATCCCGTTTTTTTTTTTTTTTTCCGCTCATTCGCCCTAGTATAC
CTCTTTACCTTATTCTTTGTTCCCCGCCTTCCTCCTCTTGTTCTTCTTAT
TCTTTTTCTACTCTTTCTTGTGCCCCCTCCCTTTGTTGCCCTCTTTGGTC
CTGTCCTTTTTTCCCTCCTTTTTTGCCTTTTCCTCCCTCTCCTTTTCTTC
TTTCTGTGTTCACTTCTCCCAAACTCCTATAACGTGTTTTATTTTATTTA
TTACTACGTACTTTCATATTAATTATCTAATTTACACAAGCATTTATCAT
TCTCTTTACATTCTGCTATTAGTTTTTTTTTTCTTTTCTATCTTTCCTGT
TCTAATTCTTTTTATCCATCCCCTTGTATCCCTTTTTTCCTCTATCTTAT
CCTCCTTCATTACTCAATATACTTTGTTATTTTTTGTCCGCTTCCGGCCA
TTCCATCTCCTTTTTATGTTAATCCCG

TGAAGTGCGAGGCTGGCGGCGCCTGGTGCAGACATGXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCTCAGAAGTTAACTGAAGCCACATTGAATCAGTCG
TCTTGAAAGATTACATAGGAAGGAGGGTATACGCTTTCAGGCCTAGGGCT
AGGGGTAGCTAGAACAGAGAAAGAAACATTCTAGGATCAGCCTAAGCCAT
GCAGTCACAGGACAAAGGTACAGCTCCTTTCTCATCTCTTCATTCATCGA
AATAAGGATAACATGTGCAGTTGTTAAACCATCTGGGCATAATTGTATGA
CAGTATTGCTATTGTGATGTTCTCATTCCCATGTACACCTCCCTTCTGTG
GTTAGTTTTTTAATGTGAATCAGATTTGACTGTACATCACAGGAAATACC
TGCTTCCTTCATTTTATAGGTATCACACTAACTGTTTTATCATCTAACTT
AAGGTGAAAAAAAATTAAACATTAACAACCTCACATAAAGAATGTGGTAT
ATTCTAAAATGTGTATAAAATTATTAAATCATATTGCCGTAATTATCTCA
AAACAAATTTCTAATATTTTCTTTAAAAGTGAAAATGCTAAACTTTTGTT
AATCAATACAGCCTGTCAGCAGCATATGTGATTTAGAAATAAAATTGAAA
TATATTTTGAGCCAGAAATATGCTGCAGCGTTAGATGACTTGTCTAGCAT
TT

Query= MSMg01no059_l13.g1 MSMg01no059_l13.g1 CHROMAT_FILE:
MSMg01no059_l13.g1 PHD_FILE: MSMg01no059_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:17 2005
         (556 letters)



>mm_chr4_37861142_37862097
          Length = 956

 Score =  992 bits (513), Expect = 0.0
 Identities = 546/557 (98%), Gaps = 2/557 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagaagttaactgaagccacattgaatcagtcgtcttgaaagattacataggaaggagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tcagaagttaactgaagccacattgaatcagtcgtcttgaaagattagataggaaggagg 260

                                                                       
Query: 61  gtatacgctttcaggcctagggctaggggtagctagaacagagaaagaaacattctagga 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtataagctttcaggcctagggctaggggtagctagaacagagaaagaaacattctagga 320

                                                                       
Query: 121 tcagcctaagccatgcagtcacaggacaaaggtacagctcctttctcatctcttcattca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagcctaagccatgcagtcacaggacaaaggtacagctcctttctcatctcttcattca 380

                                                                       
Query: 181 tcgaaataaggataacatgtgcagttgttaaaccatctgggcataattgtatgacagtat 240
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcgaaataaggacaacatgtgcagttgttaaaccatctgggcataattgtatgacagtat 440

                                                                       
Query: 241 tgctattgtgatgttctcattcccatgtacacctcccttctgtggttagttttttaatgt 300
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||
Sbjct: 441 tgctattgtgatgttctcattcccatgtacacctcccttcggtggttagttttt-aacgt 499

                                                                       
Query: 301 gaatcagatttgactgtacatcacaggaaatacctgcttccttcattttataggtatcac 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 500 gaatcagatttgactgtacatcacaggaaatacctgcttccttcattttataggtatcgc 559

                                                                       
Query: 361 actaactgttttatcatctaacttaaggtgaaaaaaaattaaacattaacaacctcacat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 actaactgttttatcatctaacttaaggtgaaaaaaaattaaacattaacaacctcacat 619

                                                                       
Query: 421 aaagaatgtggtatattctaaaatgtgtataaaa-ttattaaatcatattgccgtaatta 479
           |||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||
Sbjct: 620 aaagaatgtggtatattctaaaatgtgtataaaaattattaagtcatattgtcgtaatta 679

                                                                       
Query: 480 tctcaaaacaaatttctaatattttctttaaaagtgaaaatgctaaacttttgttaatca 539
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 680 tctcaaaacaaatttctaatattttctttgaaagtgaaaatgctaaacttttgttaatca 739

                            
Query: 540 atacagcctgtcagcag 556
           |||||||||||||||||
Sbjct: 740 atacagcctgtcagcag 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)