TTTTTACAATGGGCGCTATAGACTACTATAGGGAGAGGATCCGCGGAATT
CATCTTAGCTTCCTACCCCGTAGAAGAAGGTGGTGGGTTATGATGTGGAA
GTATCACCTTTATAAAANCCTTTCCCCCCCCACTGGCTTTTTGGCCATGG
TGCCTCTTCACAGCAATTGAACATTGACTAAGACACCAATATATCAGAAT
TGCCTTTAATGATCCCTTGATGCTGCCTTTTGAACAAGGTAGTATTGAGT
ATATATATACACATATATAATATATATATATTTTTTTCTTTCGAGACAGG
GTTTCTCTGTGTAGACCTGGATGTTTTGGAACTCACTTTGTAGACCATGA
TGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGTTTTTTA
TTCCTCCATTTTTATCTTTAAAATTTTTAATTATTATTATTTCTTTATTT
TATGTGTATGAGTGTTTTGCCTGCATGTATGTCTATGTACTATTTGATTG
CCTGATGTCTAGAGTAGATTTTCTTATTTCTTGTATTGAAGTAATATGTA
TTTTGGGATATGCTGTGTGGTTGTTGTTAATTTATTTTTGTTATTTTTGT
ATAATTTTTATTATTATTTTATTCTATCTCCTTTAATTTTTTTAGTTAAT
TTTATTTGTAATTTTTTATTAATATTTTTAAATTTTTATTTTATTTTGTT
TTTTAATTTTTTGATATATTTTTTTATTATTATTTCTTTTTTTATTTTTC
ATTTTTTATTATATTTTTTTTTTTCAATTTTATTTTTTTTATTTATTTTA
TTATTTTTGTGTCTTTTTTATTTCATATTATATTTTTTTTATTATTTTTT
TTTTTGTTTCTTATTTCTTTTATCATTCTTATTATCTTTTATATTATTTT
TTTTTTATTATATTTTAAATATTATATTTTATTTTATTTATATATTACTA
ATCTATCTATTTATTTCTATATTTATTATTATTTATTTTCTTCATAATTT
TTTAAATCTATTTTTTTTTTATTTCTTTGTTTTTAATTTTTATTTTATTT
TTTATATAATTATTCGCTTATAATTTTTTTTCTATTTTTTCAATATATTT
GAATTTTTTATTTTTTTAATTTTTATATTTCTTAATATTACTTACTGTTT
ATTATTTTTTAATATTTAATAATATTTATTATTCCTATATTATAATTGCA
A

NCGTCTTTTTTTTTTAGCATGGAGGCXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCCATAATGAAAAGCCAGGGTTTGGT
GGATGATGCATGCCCCTTTAAGCCCAGTGCTGGCCCCGGAGAGACAGAAG
GCTCTCTGGGGACTTAGGGGCCATCTAGTCTAGCTTAATTGTGAGCATCT
GTTTAATGGAAGACCCCACCTCACAAAAAGAAAAGAAGAGAAGAGAAGAG
ACAAGATGAGACGAGACAAACAAGACAAGACAAGACAAGGGAAGGCGACT
GAAGAATGAACACCACCAGGGGTTGACCTCTGACTACAGCTCTCTGTCTC
TCATGTTTGAGCAGGAAGTGCCACAAGCATCCCTGCACACAGTTGTGTCA
CCTGCAGTGCAAATGGTGGCTTTCCCAACACATCTGGAAAGGACAACATG
CCAAGTTTGAACCTCTGTTTCAGGTCCCTGATAATAACCAAGTGACCCTG
TGGCCTGTGCTTAGTGCATGCAGGTTCACTACGCAATGCCTGGCGTGTGT
GGCCTGGTGGAATCATCACTGCCAGTTCCTGAGACGATCTATGAGAACAC
CACCACCATCACCATTCCAAGTTCCATCTAAGGTAAATGTCCAGAGAGGG
GAGGGAGCTTGCACAGGGCACAGAGCCTGCAGTTGGCTGCGTAGGATTCA
GCCATCAGAACCCATGGTAACCACAGCACAGCACTGCCCTTCACTTCACA
TGTCCTTCCTTACTTTCCTTTTCCAAGGCGGTTGGCCAGACTTGTAAACT
GTAATAGAAATATGAAGTCACCAAAGGCACAGTTTACAGGCCTGCCAGGC
TGTCCTAGCAAAGCACTCTAGACTGTGTGGTTTCCACAACAGACATTTGT
GTCTCTGTTACACCGGNGGCTGTAAGTCCCAGACCAAAGGGACAGCAGGG
TCTCTCCTGAAAGGGCCTGTTCCCCGTGGACAGATATTTGCCTTTTCTCT
GTGTTCTCATGCCATGTTCCTTCTGGGGGCTATGTCCTAATCGGTCCTTC
CTTCTAAGCCGGGCCTCGGTTTGGATAGGGGGACCAAATTATCCCCGACC
CGCATTTACTTCCCGATTTTCTTTTTAAAACCCCCCCTTTCTAAGGGTGC
TATGGGGCCAAAAATCTTGAAGTTTTCACACAAAGGCTCAAAGTGGGGGG
GTGGCCTTTTTTTTTTTTTTTTTTTTAAAGAAAA

Query= MSMg01no062_g07.g1 MSMg01no062_g07.g1 CHROMAT_FILE:
MSMg01no062_g07.g1 PHD_FILE: MSMg01no062_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:56 2005
         (728 letters)



>mm_chr4_8804734_8805861
          Length = 1128

 Score = 1232 bits (637), Expect = 0.0
 Identities = 716/777 (92%), Gaps = 55/777 (7%)
 Strand = Plus / Minus

                                                                        
Query: 7    cagaaggctctctggggacttaggggccatctagtctagcttaattgtgagcatctgttt 66
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 cagaaggctctctgggggcttaggggccatctagtctagcttaattgtgagcatctgttt 1069

                                                                        
Query: 67   aatggaagaccccacctcacaaaaagaaa------------------------------- 95
            |||||||||||||||||||||||||||||                               
Sbjct: 1068 aatggaagaccccacctcacaaaaagaaaagaagagaagagaagagaagagaagagaaga 1009

                                                                        
Query: 96   ----agaagagaagagaagagac------------------a--agatgagacgagacaa 131
                |||||||||||||||||||                  |  ||| ||||||||||||
Sbjct: 1008 gaagagaagagaagagaagagacgagacgagacgagacgagacgagacgagacgagacaa 949

                                                                        
Query: 132  acaagacaagacaagacaagggaaggcgactgaagaatgaacaccaccaggggttgacct 191
            |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 948  acaagacaagacaagaaaagggaaggctactgaagaatgaacaccaccaggggttgacct 889

                                                                        
Query: 192  ctgactacagctctctgtctctcatgtttgagcaggaagtgccacaagcatccctgcaca 251
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888  ctgactacagctctctgtctctcatgtttgagcaggaagtgccacaagcatccctgcaca 829

                                                                        
Query: 252  cagttgtgtcacctgcagtgcaaatggtggctttcccaacacatctggaaaggacaacat 311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828  cagttgtgtcacctgcagtgcaaatggtggctttcccaacacatctggaaaggacaacat 769

                                                                        
Query: 312  gccaagtttgaacctctgtttcaggtccctgataataaccaagtgaccctgtggcctgtg 371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768  gccaagtttgaacctctgtttcaggtccctgataataaccaagtgaccctgtggcctgtg 709

                                                                        
Query: 372  cttagtgcatgcaggttcactacgcaatgcctggcgtgtgtggcctggtggaatcatcac 431
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708  cttagtgcatgcaggttcactacgcaatgcctggcgtgtgtggcctggtggaatcatcac 649

                                                                        
Query: 432  tgccagttcctgagacgatctatgagaacaccaccaccatcaccattccaagttccatct 491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648  tgccagttcctgagacgatctatgagaacaccaccaccatcaccattccaagttccatct 589

                                                                        
Query: 492  aaggtaaatgtccagagaggggagggagcttgcacagggcacagagcctgcagttggctg 551
            ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 588  aaggtaaatgtccagagaggggagggagcttgcacaggttacagagcctgcagttggctg 529

                                                                        
Query: 552  cgtaggattcagccatcagaacccatggtaaccacagcacagcactgcccttcacttcac 611
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528  cgtaggattcagccatcagaacccatggtaaccacagcacagcactgcccttcacttcac 469

                                                                        
Query: 612  atgtccttccttactttccttttccaaggcggttggccagacttgtaaactgtaatagaa 671
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468  atgtccttccttactttccttttccaaggcggttggccagacttgtaaactgtaatagaa 409

                                                                     
Query: 672  atatgaagtcaccaaaggcacagtttacaggcctgccaggctgtcctagcaaagcac 728
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408  atatgaagtcaccaaaggcacagtttacaggcctgccaggctgtcctagcaaagcac 352


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 728
Length of database: 1128
Length adjustment: 10
Effective length of query: 718
Effective length of database: 1118
Effective search space:   802724
Effective search space used:   802724
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)