CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATTC
TTTTCCTCCAAAAATTACTAGGAGAAATTATTTTTCTCTTCCTGTTGCGT
TTAATTGAGTCCATTTTAAGATTAGTACATGCCTACCATGACGCTTACTT
TGATTTATGGAAAACAAAATTTTCTGTCTCCAGGAACTAACATTCATACT
TGGCTTTCAATTAGGAAATAGCATGGCCATGTGACACACATGATATGGAA
ATGTACATATTGTGAGAAGTCACTAATTAACCGTTTATATTTTAGTTTGT
AAGGGGAGGCTCATGGGGGATTTAGGATTTGAAATGATTTTGTGTGTACT
TTGGGACAAGGCTTGTGTATCCTAGGCTGGACTAGTCTAGCCTGTGTTGT
CCAGAGTGGCCTTGCAGTTGTGATCTTCCTGCCTTTCCACTCCTGTGTGC
TGGGATTACGAGATGCACCACTGTGCCTAACTTGTTTTGAGACAGAGTCT
CACTATGTACTCCTGGCTGGCCTGAAGTAGAGCAGGCTGCACTCAACCCC
ACAGAGATCTTTCTACCTCTTCTTCCCACTAGAGGAATAAAGGTGTATGC
TACATCCTTGCCCCATTCATCCTTAACTTCTGAAGAGATTCTTGTATTAC
TCTCAGCTCTACTTTTTGTTTCGCGCCTAGGCA

NCCCCNNNNNNNNNNNNNTTTTNCCCCCTTNCNNCCNCNNCCTTNNCCCN
NNNTNNCCCCCTCTTTTTCCCTTTTTTTTCTTTNTCTTCTTCTTTTTTTC
TCCCCCCTTTTTTCTCCCTCCCCTCGCTGTTCTATTCCTTCCTCCCTCTC
TCCCTCTCTCTACCGCGCCGCCCCCTTCGCCCCCCCTTCACCTCCTGTAT
GCTTCCCCCTTTTCTCTGTCCCTTTCCTTTCCCTCCCGCCCTCCCCTTAT
TTCAATTAGACGCAACCCTACTCCTCCTCCATTCNTCCGGCGCTCCCNNN
NNCGCCGCCAATGTAATAGCGGCGGGCTAGGGGCCCCCCCTGTGGTCGGA
CCCGGCCCTTGTTGGCCCCGGGTTTCCCGGAAAAACAAATTTTTTTTAAA
GGGGTTTGGAAACAACCCTTAAATAAGGAAAAGGGATAACCCCGCGGCGA
AAATTTCTTTTTCCATCCCCACAGGGAAAGGGATTTGCAATTTAGAAGAA
ACATAAAGGGGTGGGCAATAAAGTTTGGGAATTTAATAAAAGGGGGTAAT
TTTTTTTTAAAAAAAAAATTCTTGGGTTTAAACAAAATTTTTGGGGGGCC
ACCTGGGGCCGGAATTATTTTCTAAAAAATAAAAAGGGGCCCTTTTGGGG
TTTCCCCCCCCCCAAAAAAAAATTTTTTTAAACCTTTAGGGGAAAAAAAA
TTTTTTGGGAAACCAATAAAAAGGATTCTCTCAAAGGAAACAAAAAAATA
CCCCGAGGGAGGGTTAATTTTTTTTTATAAAAGGAGGGGAGAAAAACCCG
GGGGGGGGGGGGGGGGGGTGGATTATTTTAAAATAAAGAAAACCTCTCGT

Query= MSMg01no063_c08.b1 MSMg01no063_c08.b1 CHROMAT_FILE:
MSMg01no063_c08.b1 PHD_FILE: MSMg01no063_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:23 2005
         (481 letters)



>mm_chr4_99389764_99390645
          Length = 882

 Score =  890 bits (460), Expect = 0.0
 Identities = 472/476 (99%), Gaps = 1/476 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcttttcctccaa-aaattactaggagaaattatttttctcttcctgttgcgttta 65
           |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcttttcctttaagaaattactaggagaaattatttttctcttcctgttgcgttta 266

                                                                       
Query: 66  attgagtccattttaagattagtacatgcctaccatgacgcttactttgatttatggaaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 attgagtccattttaagattagtacatgcctaccatgacgcttactttgatttatggaaa 326

                                                                       
Query: 126 acaaaattttctgtctccaggaactaacattcatacttggctttcaattaggaaatagca 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 acaaaattttctgtctccaggaactaacattcatacttggctttcaattaggaaatagca 386

                                                                       
Query: 186 tggccatgtgacacacatgatatggaaatgtacatattgtgagaagtcactaattaaccg 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tggccatgtgacacacatgatatggaaatgtacatattgtgagaagtcactaattaaccg 446

                                                                       
Query: 246 tttatattttagtttgtaaggggaggctcatgggggatttaggatttgaaatgattttgt 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tttatattttagtttgtaaggggaggctcatgggggatttaggatttgaaatgattttgt 506

                                                                       
Query: 306 gtgtactttgggacaaggcttgtgtatcctaggctggactagtctagcctgtgttgtcca 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gtgtactttgggacaaggcttgtgtatcctaggctggactagtctagcctgtgttgtcca 566

                                                                       
Query: 366 gagtggccttgcagttgtgatcttcctgcctttccactcctgtgtgctgggattacgaga 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gagtggccttgcagttgtgatcttcctgcctttccactcctgtgtgctgggattacgaga 626

                                                                   
Query: 426 tgcaccactgtgcctaacttgttttgagacagagtctcactatgtactcctggctg 481
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgcaccactgtgcctaatttgttttgagacagagtctcactatgtactcctggctg 682


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 882
Length adjustment: 10
Effective length of query: 471
Effective length of database: 872
Effective search space:   410712
Effective search space used:   410712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)