Query= MSMg01no065_b07.b1 MSMg01no065_b07.b1 CHROMAT_FILE:
MSMg01no065_b07.b1 PHD_FILE: MSMg01no065_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:29 2005
(263 letters)
>mm_chr4_153648951_153649613
Length = 663
Score = 470 bits (243), Expect = e-137
Identities = 257/263 (97%), Gaps = 4/263 (1%)
Strand = Plus / Plus
Query: 3 ggaattctaaagctttcccag--ggaaaagggttttaagaatcagactggccagaaactc 60
||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctaaagca--cccagagggaaaagggttttaagaatcagactggccagaaactc 260
Query: 61 tacaagggaggggctggcagccaggaaatggtggtgatgtcacaggtattgaaaatatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacaagggaggggctggcagccaggaaatggtggtgatgtcacaggtattgaaaatatac 320
Query: 121 aattatatccagctaaactatcaccatgcccacaggttcacccatgtctaatttggaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattatatccagctaaactatcaccatgcccacaggttcacccatgtctaatttggaaat 380
Query: 181 atttttgggaagagcctaagagacctcacggcacacttcctacatggccatcatgaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttttgggaagagcctaagagacctcacggcacacttcctacatggccatcatgaggag 440
Query: 241 aactaaaattttccttctaaacc 263
|||| ||||||||||||||||||
Sbjct: 441 aactgaaattttccttctaaacc 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no065_b07.g1 MSMg01no065_b07.g1 CHROMAT_FILE:
MSMg01no065_b07.g1 PHD_FILE: MSMg01no065_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:29 2005
(113 letters)
>mm_chr4_153776616_153777129
Length = 514
Score = 205 bits (106), Expect = 7e-58
Identities = 112/114 (98%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 1 ctctctgggg-taaaggtggctcctgagggagagaatagaaagctgaccttaaaggaaga 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctctctggggttaaaggtggctcctgagggagagaatagaaagctgaccttaaaggaaga 255
Query: 60 aaagcaagctcggccagctgccaggaggtgagagcttccttccacacctagcca 113
|||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 254 aaagcaagctcggccagctgccaggaggtgagagcttccttccaaacctagcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 113
Length of database: 514
Length adjustment: 8
Effective length of query: 105
Effective length of database: 506
Effective search space: 53130
Effective search space used: 53130
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
