Query= MSMg01no066_c10.b1 MSMg01no066_c10.b1 CHROMAT_FILE:
MSMg01no066_c10.b1 PHD_FILE: MSMg01no066_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:51 2005
(316 letters)
>mm_chr4_154376478_154377193
Length = 716
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 6 ggaattctgcgccttct-cacagatgatgtctacccgccgagacctctacctgctcatgc 64
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggaattctgcgccttctaca-agatgatgtctacccgccgagacctctacctgctcatgc 458
Query: 65 tgacctacagcaaccataaggaccacttggatgcctccgacctgcagcgctttctggagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgacctacagcaaccataaggaccacttggatgcctccgacctgcagcgctttctggagg 398
Query: 125 tggagcagaaggtgaggccctgccagaagctgtgtggctggtggttgtggcctcaatttc 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 397 tggagcagaaggtgaggccctgccagaagctgtgtggctggtgggtgtggcctcaatttc 338
Query: 185 agcctcagcttctgccaccatgtgttctgagcttcctagcagagtagagttgggcccttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agcctcagcttctgccaccatgtgttctgagcttcctagcagagtagagttgggcccttg 278
Query: 245 acgctgccaggtaagtgaggaagctcataggttcttcgcagacagagggggcctctggtc 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 277 acgctgccaggtaagtgaggaagcttataggttcttcgcagacagagggggcctctggtc 218
Query: 305 agctccattctg 316
||||||||||||
Sbjct: 217 agctccattctg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_c10.g1 MSMg01no066_c10.g1 CHROMAT_FILE:
MSMg01no066_c10.g1 PHD_FILE: MSMg01no066_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:51 2005
(314 letters)
>mm_chr4_154250515_154251228
Length = 714
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Plus
Query: 1 tgttcacaagcaaccatattcattgttcaggttagctgaccacagcctctgcctgttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttcacaagcaaccatattcattgttcaggttagctgaccacagcctctgcctgttctt 260
Query: 61 gtaaacaaagctttagtggcacgctgccttgcccactgtgtgcgcctatgcttctcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaaacaaagctttagtggcacgctgccttgcccactgtgtgcgcctatgcttctcttcc 320
Query: 121 ggccaagcagcagagctgcgtaggtgagactgagcctgccagcaacccttcttgcaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccaagcagcagagctgcgtaggtgagactgagcctgccagcaacccttcttgcaggga 380
Query: 181 gatgtcaccagcctggacctgagctgtgtcctcggagtcggcagctcatccttgggcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgtcaccagcctggacctgagctgtgtcctcggagtcggcagctcatccttgggcttt 440
Query: 241 tctgtctgttactcggtgaggaaaggagggacctgaggtggtatgcacaccactgcccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgtctgttactcggtgaggaaaggagggacctgaggtggtatgcacaccactgcccag 500
Query: 301 ctatacagcctggc 314
||||||||||||||
Sbjct: 501 ctatacagcctggc 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
