ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGAATCCGCGGAAT
TCTTTAAGCATTCCCTTAAAAATTAACTCATGTATTATACATGGTTCTTC
AAGAAGATTATGGGGGAAAAGGGATACATTCTATACTAGATTAATTTTCC
TTTAGTAATAGAATTCTGAGGCTTTCATGGCTTTTTTTTTCTGATGTCTA
CATTTCCTGGCATCCCTTCCAGATAGCCCATGCCTTATTGATATTTATTC
AATAATCAAAAATGAGTCAGTCCTCTATCATGATCTTAAGAAGGTAAACC
TTCCTTTTTATATTTCAGTCTTTTTTCTGTTGTCTAATCTATGTACAAAA
TGGTGAGGTAATTTATAGAATGAGGAGGGGAATCCTGTAGGAAAGTTAGA
ACAGGAATCTAAAATGGATGACCCTCAGTATTCCCATAAAGTGGCCTTGA
ACAATCCATATTCTAATGTTCAAATAGGAAAGCAGTGGAGCTGGAGGCAT
AACTACATATTCTGGAAGCTCTGGAGTTTAGAGAGATAAGGAGTGTACTC
GTATTTCACCAATCTGAAATAAAACCTAACTAAAATAAATATAGCCTCTG
AAGATTATGTCTTTACATAACATCTCTACAAAGACATAATATTCATTATT
CAAGGTAGCAGAATGTGAGTTAGAACGAAATATATATG

TCGCCTTTCTGATCCCTGCGCTCGTTGTTTCTGTGCTCTTCCCCCCGCCG
GTACCCGGTTTACGGTCGGTGGTTATTGCCCTCTGGCTGCGCTATCGGTG
CACGCCTGTGTTTGCCTTTGGGCGCGTTGAGTTAGTGCCGACGCGGGTGT
GAATGTGTGCTGTGATGCGGCCGTGATGGGCTGCTCGGGTTAGAGGTGTA
TCGCTCATATGTATACCGTGTGTGCGTGTATAGTGGGACGATCCTCGGCT
CCGCGCCGTATGCGCCCCTGGTGCTATGATAACGCCCCCATATACCGCCG
CAATATACCAGCCATTATTAATAAAAGGATAAACACAATGTGTAAACCAC
ATATTCACGCAAGTAATGACCCCGCCCGTATAACACCAAATATACGCACA
CTAAAACACCATTTCCNCGATAACATATAGCTCGGCTTTAAGCTTATTCT
TATCGCATTCCGTGCCAGTAAACCTGTAATGTCGACACCGAGCTATTATA
CGGGCCCGATATACCATAAGCGCTAACGAATTCGCATTACGCATTTCTAA
TATGACTATGCAGTACTGACAACAATATACCGACCAGAAAACCTATACAC
GACATAGCGATAATCGCGCCAGTAGGCATGTGCACGTAATATGGAGCAGC
GATACGTCCGTATTAATCGGTACGAAATGATATATGTGAGAACATCTCGA
TCTCCCCTGTGCACACATATATGTATTGCACCGCATCCTATGACTTATTA
GATCCGTAGCGGCTGTGATACTGCGTATATGACAGTGCTCGACACACTGA
AATGTGTGAAGGATACACTGACTATCCGTGTTTGAAAGATTGTGCAGTTA
TTATCTGACGGTAATGACCGCCTCGCGTGTTGACATAAATGCTGCCTACT
GATCGACTGACACTGCGCGATGTGATATGATATGTGTGTGCGCATGCGTA
TATGCGTGTGAGTCAATTACAGCATGAGCACAATACTGGTAGTGACGCCC
GAAGTGGTGAAGCGCACCCTAATAGATCATAGGCGTGATGTGCNCNCAGC
GTGNACAATTGGACATGAAATCGGACACAAGTGACAACTGCAGTACTCGC
CGTGGCGTGAATTGTTGTGTTGACAGATATGATAANGCAACACGTATGGT
GCATCACGTTGCGTGGAGCAGTATACCGTGTGATACGTTGCGGCGACG

Query= MSMg01no066_i22.b1 MSMg01no066_i22.b1 CHROMAT_FILE:
MSMg01no066_i22.b1 PHD_FILE: MSMg01no066_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:23 2005
         (589 letters)



>mm_chr4_18113909_18114897
          Length = 989

 Score = 1067 bits (552), Expect = 0.0
 Identities = 579/588 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaaaattaactcatgtattatacatggttcttcaagaagattatgggggaaaagggata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 taaaaattaactcatgtattatacatggttcttcaagaagattatggggtaaaagggata 260

                                                                       
Query: 61  cattctatactagattaattttcctttagtaatagaattctgaggctttcatggcttttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattctatactagattaattttcctttagtaatagaattctgaggctttcatggcttttt 320

                                                                       
Query: 121 ttttctgatgtctacatttcctggcatcccttccagatagcccatgccttattgatattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttctgatgtctacatttcctggcatcccttccagatagcccatgccttattgatattt 380

                                                                       
Query: 181 attcaataatcaaaaatgagtcagtcctctatcatgatcttaagaaggtaaaccttcctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcaataatcaaaaatgagtcagtcctctatcatgatcttaagaaggtaaaccttcctt 440

                                                                       
Query: 241 tttatatttcagtcttttttctgttgtctaatctatgtacaaaatggtgaggtaatttat 300
           |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttatatttcagtctacattctgttgtctaatctatgtacaaaatggtgaggtaatttat 500

                                                                       
Query: 301 agaatgaggaggggaatcctgtaggaaagttagaacaggaatctaaaatggatgaccctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaatgaggaggggaatcctgtaggaaagttagaacaggaatctaaaatggatgaccctc 560

                                                                       
Query: 361 agtattcccataaagtggccttgaacaatccatattctaatgttcaaataggaaagcagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtattcccataaagtggccttgaacaatccatattctaatgttcaaataggaaagcagt 620

                                                                       
Query: 421 ggagctggaggcataactacatattctggaagctctggagtttagagagataaggagtgt 480
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 621 ggagctggaggcataactacatattctggaagctctggagttttgagagataaagagtgt 680

                                                                       
Query: 481 actcgtatttcaccaatctgaaataaaacctaactaaaataaatatagcctctgaagatt 540
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actcgtattttaccaatctgaaataaaacctaactaaaataaatatagcctctgaagatt 740

                                                           
Query: 541 atgtctttacataacatctctacaaagacataatattcattattcaag 588
           ||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 741 atgtctttatataacatctccacaaagacataatattcattattcaag 788


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)