ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTAGGAAGTGTACATGTTCCCAATAGCTATATGAAGAGGTAAATTTG
CACTGAAAATGTGGTTACTAAAACCATTGGGCTATTAACTAATGAAACAA
CCCTGTGCATATTTTCTAACCACATATCTGCAAAGCACATTTATCAACTC
AATTTCTCAAGGCTAACAAGGGTATCAGGCTGGATTAGAAATCAGAAGTC
TCTCTATTCCTCAGCACACATGATTAACGCACATCTGTTCCCTAGTGCAC
AGCATTAATTTTAGAAGTAATGCATCAGTATTAGTCTGAGTTGACCCAGA
AAGGCACTGGATCTTTCAGGGCACAAACTCTGCGCTCCCAATTCACTGTG
ATATCAGACAGGAAACCCATAATCCATGTCTTCATCCAGACTATGAGGAA
TAAAAATATTGGGAGTGAGAAAGCTAGGTCATCTGAGTTTACTTTCCCTT
CCCATCCCTCTTATTCCCTACTTTAAAATTAATTTTTCTAGATCATGCTT
CTCAAAGAGTTAATTTGCTATGTGATCATTTAGTATTCCTAAAGACCTTC
TTCAGCTTAAAGGACAGATTGTTTGAGCTGTGCACAAAATCCAAAAAGAA
GTAAGGAAGGAAATTAAAAGTATTGGGAAGAGAGACCTCTTGGTCTTCCC
AACTTTAC

CGATGAAGTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATTAAATGATCAACATCCGCAGTGATA
TGGAATTGTAAGCCAAATAAGTGCTTTTCTCTCCAAATCGCTTTTATCAA
TGGGGATTCATGTTACCCATAGTAACCACAACGAAGACATTTAACATTCT
AGGTTGCAGATGAAGTTCAAATATCACACAATAATCCTACTTGGTTATTA
TAATAACCATGAACATTAGCTAGCATAGTTGTAAAATATTAAACAGTAGA
TAGCAGAGCCAGTATAAGTATCCTTAGATCCCAAATACAAGTTTTTGACC
GTCCTCTTTACTCTTTATAATACTGCCACCCGCTTGCTTTAAATTATATT
TGATAGGGTATTTGATAGAGTAGATGTATATTAAATAATTTATACCAAAT
CATGTAAGAAAAGGAAGCTGCAATATGCTGATACCTAAGACGTTTGGCGA
GGAAATGATATAAGTACCTGCTATCTCTGTAAGGATTTCTTCCATGCTTC
AGAAAGAGTGATTAAATTTATTTCATTTTTTTAAATGATCGATTACCATC
ACCATAATGAAGCATTACGATTATACGTTTTGTTTCTTAAGTATTTTCCT
ATGAGTTGAGTCGTTGTGTAATGTTGAATATAGTAAATAAATTCCGGATC
TACCGCTCC

Query= MSMg01no067_d17.b1 MSMg01no067_d17.b1 CHROMAT_FILE:
MSMg01no067_d17.b1 PHD_FILE: MSMg01no067_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:17 2005
         (319 letters)



>mm_chr4_76434247_76434965
          Length = 719

 Score =  571 bits (295), Expect = e-167
 Identities = 310/315 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctaggaagtgtacatgttcccaatagctatatgaagaggtaaatttgcactgaaa 64
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaattctaggaagtggatatgttcccaatagctatatgaagaggtaaatttgcactgaaa 460

                                                                       
Query: 65  atgtggttactaaaaccattgggctattaactaatgaaacaaccctgtgcatattttcta 124
           ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 459 atgtggttactaaaagcattgggctattaactaatgaaactaccctgtgcatattttcta 400

                                                                       
Query: 125 accacatatctgcaaagcacatttatcaactcaatttctcaaggctaacaagggtatcag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 accacatatctgcaaagcacatttatcaactcaatttctcaaggctaacaagggtatcag 340

                                                                       
Query: 185 gctggattagaaatcagaagtctctctattcctcagcacacatgattaacgcacatctgt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gctggattagaaatcagaagtctctctattcctcagcacacatgattaacgcacatctgt 280

                                                                       
Query: 245 tccctagtgcacagcattaattttagaagtaatgcatcagtattagtctgagttgaccca 304
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 279 tccctagtgcacagcattaattttagaagtaatgcagcagtattagtctgagttgaccca 220

                          
Query: 305 gaaaggcactggatc 319
           |||||||||||||||
Sbjct: 219 gaaaggcactggatc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space:   220100
Effective search space used:   220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no067_d17.g1 MSMg01no067_d17.g1 CHROMAT_FILE:
MSMg01no067_d17.g1 PHD_FILE: MSMg01no067_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:17 2005
         (291 letters)



>mm_chr4_76359984_76360674
          Length = 691

 Score =  542 bits (280), Expect = e-158
 Identities = 286/288 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attaaatgatcaacatccgcagtgatatggaattgtaagccaaataagtgcttttctctc 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 attaaatgatcaacatccgcagtgatatggaattgtaagccaaataagcgcttttctctc 260

                                                                       
Query: 61  caaatcgcttttatcaatggggattcatgttacccatagtaaccacaacgaagacattta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaatcgcttttatcaatggggattcatgttacccatagtaaccacaacgaagacattta 320

                                                                       
Query: 121 acattctaggttgcagatgaagttcaaatatcacacaataatcctacttggttattataa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acattctaggttgcagatgaagttcaaatatcacacaataatcctacttggttattataa 380

                                                                       
Query: 181 taaccatgaacattagctagcatagttgtaaaatattaaacagtagatagcagagccagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaccatgaacattagctagcatagttgtaaaatattaaacagtagatagcagagccagt 440

                                                           
Query: 241 ataagtatccttagatcccaaatacaagtttttgaccgtcctctttac 288
           |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataagtatccatagatcccaaatacaagtttttgaccgtcctctttac 488


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space:   192324
Effective search space used:   192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)