Query= MSMg01no069_c11.b1 MSMg01no069_c11.b1 CHROMAT_FILE:
MSMg01no069_c11.b1 PHD_FILE: MSMg01no069_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:49 2005
(211 letters)
>mm_chr4_104582186_104582797
Length = 612
Score = 395 bits (204), Expect = e-114
Identities = 210/212 (99%), Gaps = 1/212 (0%)
Strand = Plus / Plus
Query: 1 cacaccgtgtctcctataggaaaag-aaaccaaagatattaaaagaagattttgacccca 59
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 201 cacaccgtgtctcctataggaaaagcaaaccaaagatattaaaagaagattttgagccca 260
Query: 60 acttcagtctatctgttaagatctcccacctcccactttcagaacttaatttgggggaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttcagtctatctgttaagatctcccacctcccactttcagaacttaatttgggggaac 320
Query: 120 ctactttaaacctttaagctctcagaccctgtaagcttattgtttggtatttcttgaaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctactttaaacctttaagctctcagaccctgtaagcttattgtttggtatttcttgaaca 380
Query: 180 ttgaaagaaatggcaaacaggctggctgcgag 211
||||||||||||||||||||||||||||||||
Sbjct: 381 ttgaaagaaatggcaaacaggctggctgcgag 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 612
Length adjustment: 9
Effective length of query: 202
Effective length of database: 603
Effective search space: 121806
Effective search space used: 121806
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_c11.g1 MSMg01no069_c11.g1 CHROMAT_FILE:
MSMg01no069_c11.g1 PHD_FILE: MSMg01no069_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:49 2005
(244 letters)
>mm_chr4_104716461_104717100
Length = 640
Score = 406 bits (210), Expect = e-118
Identities = 234/244 (95%), Gaps = 4/244 (1%)
Strand = Plus / Minus
Query: 1 aagcctttttgaattaaaaccgatgttatttttactatcctatattcccacatgagttat 60
||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||
Sbjct: 440 aagcctttttgaattaaaaccgatgctatttttactatcctagattgttacatgagttat 381
Query: 61 acggcgtttatttctctttaattccctcataatactttgtatttcttttatactgtgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acggcgtttatttctctttaattccctcataatactttgtatttcttttatactgtga-- 323
Query: 121 cttagttattgtggaaattgggtataatgatctgacaagcttcaggcaggagtgttttac 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 322 --tagttattgtggaaattggggataatgatctgacaagcttcaggcaggagtgttttac 265
Query: 181 atatcagagttttccaggttttgaaatatttgcatagatttttttcccagttaaccatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atatcagagttttccaggttttgaaatatttgcatagatttttttcccagttaaccatcc 205
Query: 241 ttat 244
||||
Sbjct: 204 ttat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 640
Length adjustment: 9
Effective length of query: 235
Effective length of database: 631
Effective search space: 148285
Effective search space used: 148285
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
